RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.75□□□□□ -0.37
PKP3-209ENST00000533069 PRNDQ9UKY0 176 aa12.75□□□□□ -0.37
PKP3-209ENST00000533069 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.74□□□□□ -0.37
PKP3-209ENST00000533069 FAM25EA8MYX2 175 aa12.74□□□□□ -0.37
PKP3-209ENST00000533069 PFDN1O60925 122 aa12.74□□□□□ -0.37
PKP3-209ENST00000533069 OR2J3O76001 311 aa12.74□□□□□ -0.37
PKP3-209ENST00000533069 IGLV1-51P01701 117 aa12.74□□□□□ -0.37
PKP3-209ENST00000533069 TRBV12-3P01733 135 aa12.74□□□□□ -0.37
PKP3-209ENST00000533069 AREGP15514 252 aa12.74□□□□□ -0.37
PKP3-209ENST00000533069 HIST1H1BP16401 226 aaKnown RBP12.74□□□□□ -0.37
PKP3-209ENST00000533069 SYNJ2BPP57105 145 aa12.74□□□□□ -0.37
PKP3-209ENST00000533069 OR2B8PP59922 312 aa12.74□□□□□ -0.37
PKP3-209ENST00000533069 KLK9Q2XQG4 91 aa12.74□□□□□ -0.37
PKP3-209ENST00000533069 AARDQ4LEZ3 155 aa12.74□□□□□ -0.37
PKP3-209ENST00000533069 ZBTB8BQ8NAP8 495 aaPredicted RBP12.74□□□□□ -0.37
PKP3-209ENST00000533069 OR4A16Q8NH70 328 aa12.74□□□□□ -0.37
PKP3-209ENST00000533069 PPP1R14BQ96C90 147 aa12.74□□□□□ -0.37
PKP3-209ENST00000533069 PRR13Q9NZ81 148 aa12.74□□□□□ -0.37
PKP3-209ENST00000533069 KLK9Q9UKQ9 250 aa12.74□□□□□ -0.37
PKP3-209ENST00000533069 CTRB1P17538 263 aa12.73□□□□□ -0.37
PKP3-209ENST00000533069 CXCL3P19876 107 aa12.73□□□□□ -0.37
PKP3-209ENST00000533069 H2BFSP57053 126 aa12.73□□□□□ -0.37
PKP3-209ENST00000533069 CTRB2Q6GPI1 263 aa12.73□□□□□ -0.37
PKP3-209ENST00000533069 HSD17B13Q7Z5P4 300 aaPredicted RBP12.73□□□□□ -0.37
PKP3-209ENST00000533069 TCTE3Q8IZS6 198 aa12.73□□□□□ -0.37
PKP3-209ENST00000533069 OR52E5Q8NH55 327 aa12.73□□□□□ -0.37
PKP3-209ENST00000533069 OR1S1Q8NH92 325 aa12.73□□□□□ -0.37
PKP3-209ENST00000533069 GPR146Q96CH1 333 aa12.73□□□□□ -0.37
PKP3-209ENST00000533069 FBXL7Q9UJT9 491 aa12.73□□□□□ -0.37
PKP3-209ENST00000533069 SMAD5-AS1Q9Y6J3 95 aa12.73□□□□□ -0.37
PKP3-209ENST00000533069 TRAV3A0A0B4J244 114 aa12.72□□□□□ -0.37
PKP3-209ENST00000533069 CGB1A6NKQ9 187 aa12.72□□□□□ -0.37
PKP3-209ENST00000533069 BMPR1BO00238 502 aa12.72□□□□□ -0.37
PKP3-209ENST00000533069 CCSO14618 274 aa12.72□□□□□ -0.37
PKP3-209ENST00000533069 MED6O75586 246 aa12.72□□□□□ -0.37
PKP3-209ENST00000533069 NHLRC4P0CG21 123 aaPredicted RBP12.72□□□□□ -0.37
PKP3-209ENST00000533069 DEFA4P12838 97 aa12.72□□□□□ -0.37
PKP3-209ENST00000533069 GP9P14770 177 aa12.72□□□□□ -0.37
PKP3-209ENST00000533069 MYOD1P15172 320 aa12.72□□□□□ -0.37
PKP3-209ENST00000533069 OR5B3Q8NH48 314 aa12.72□□□□□ -0.37
PKP3-209ENST00000533069 OR10C1Q96KK4 312 aa12.72□□□□□ -0.37
PKP3-209ENST00000533069 FANCD2OSQ96PS1 177 aa12.72□□□□□ -0.37
PKP3-209ENST00000533069 QTRT1Q9BXR0 403 aaKnown RBP12.72□□□□□ -0.37
PKP3-209ENST00000533069 SIGLEC8Q9NYZ4 499 aa12.72□□□□□ -0.37
PKP3-209ENST00000533069 PEMTQ9UBM1 199 aa12.72□□□□□ -0.37
PKP3-209ENST00000533069 CACNG5Q9UF02 275 aa12.72□□□□□ -0.37
PKP3-209ENST00000533069 IGLC7A0M8Q6 106 aa12.71□□□□□ -0.37
PKP3-209ENST00000533069 C15orf61A6NNL5 157 aa12.71□□□□□ -0.37
PKP3-209ENST00000533069 PITX3O75364 302 aa12.71□□□□□ -0.37
PKP3-209ENST00000533069 RLN2P04090 185 aa12.71□□□□□ -0.37
PKP3-209ENST00000533069 NKX2-1P43699 371 aaPredicted RBP12.71□□□□□ -0.37
PKP3-209ENST00000533069 C19orf35Q6ZS72 473 aa12.71□□□□□ -0.37
PKP3-209ENST00000533069 OR4D5Q8NGN0 318 aa12.71□□□□□ -0.37
PKP3-209ENST00000533069 COL7A1Q02388 2944 aa12.7□□□□□ -0.38
PKP3-209ENST00000533069 IGLV11-55A0A075B6I3 123 aa12.7□□□□□ -0.38
PKP3-209ENST00000533069 CYB5BO43169 146 aa12.7□□□□□ -0.38
PKP3-209ENST00000533069 ST8SIA3O43173 380 aa12.7□□□□□ -0.38
PKP3-209ENST00000533069 REG1AP05451 166 aa12.7□□□□□ -0.38
PKP3-209ENST00000533069 PVALBP20472 110 aaPredicted RBP12.7□□□□□ -0.38
PKP3-209ENST00000533069 IL15RAQ13261 267 aa12.7□□□□□ -0.38
PKP3-209ENST00000533069 IL34Q6ZMJ4 242 aa12.7□□□□□ -0.38
PKP3-209ENST00000533069 OR1L8Q8NGR8 309 aa12.7□□□□□ -0.38
PKP3-209ENST00000533069 EEF1AKMT3Q96AZ1 226 aa12.7□□□□□ -0.38
PKP3-209ENST00000533069 CXorf58Q96LI9 332 aa12.7□□□□□ -0.38
PKP3-209ENST00000533069 TMEM14BQ9NUH8 114 aa12.7□□□□□ -0.38
PKP3-209ENST00000533069 THYN1Q9P016 225 aa12.7□□□□□ -0.38
PKP3-209ENST00000533069 GSKIPQ9P0R6 139 aa12.7□□□□□ -0.38
PKP3-209ENST00000533069 HSPB7Q9UBY9 170 aa12.7□□□□□ -0.38
PKP3-209ENST00000533069 A0A0G2JRQ6 117 aa12.69□□□□□ -0.38
PKP3-209ENST00000533069 WRBO00258 174 aa12.69□□□□□ -0.38
PKP3-209ENST00000533069 GGCTO75223 188 aaKnown RBP12.69□□□□□ -0.38
PKP3-209ENST00000533069 NDUFB8O95169 186 aa12.69□□□□□ -0.38
PKP3-209ENST00000533069 SIX6O95475 246 aa12.69□□□□□ -0.38
PKP3-209ENST00000533069 SPCS3P61009 180 aa12.69□□□□□ -0.38
PKP3-209ENST00000533069 ID3Q02535 119 aa12.69□□□□□ -0.38
PKP3-209ENST00000533069 C11orf87Q6NUJ2 197 aa12.69□□□□□ -0.38
PKP3-209ENST00000533069 OR2T35Q8NGX2 323 aa12.69□□□□□ -0.38
PKP3-209ENST00000533069 PPP1R1CQ8WVI7 109 aa12.69□□□□□ -0.38
PKP3-209ENST00000533069 ST6GAL2Q96JF0 529 aa12.69□□□□□ -0.38
PKP3-209ENST00000533069 CIB3Q96Q77 187 aaPredicted RBP12.69□□□□□ -0.38
PKP3-209ENST00000533069 NEURL2Q9BR09 285 aa12.69□□□□□ -0.38
PKP3-209ENST00000533069 TNCP24821 2201 aa12.69□□□□□ -0.38
PKP3-209ENST00000533069 TRBV7-1A0A0A6YYK4 115 aa12.68□□□□□ -0.38
PKP3-209ENST00000533069 TEX50A0A1B0GTY4 177 aa12.68□□□□□ -0.38
PKP3-209ENST00000533069 MPTX1A8MV57 137 aa12.68□□□□□ -0.38
PKP3-209ENST00000533069 SCAF4O95104 1147 aaKnown RBP12.68□□□□□ -0.38
PKP3-209ENST00000533069 CSN3P07498 182 aa12.68□□□□□ -0.38
PKP3-209ENST00000533069 HSPE1P61604 102 aaKnown RBP12.68□□□□□ -0.38
PKP3-209ENST00000533069 LCN12Q6JVE5 192 aa12.68□□□□□ -0.38
PKP3-209ENST00000533069 HAPLN4Q86UW8 402 aa12.68□□□□□ -0.38
PKP3-209ENST00000533069 THAP6Q8TBB0 222 aa12.68□□□□□ -0.38
PKP3-209ENST00000533069 CCDC140Q96MF4 163 aa12.68□□□□□ -0.38
PKP3-209ENST00000533069 RAB40CQ96S21 281 aa12.68□□□□□ -0.38
PKP3-209ENST00000533069 NDUFA4L2Q9NRX3 87 aa12.68□□□□□ -0.38
PKP3-209ENST00000533069 OR51B2Q9Y5P1 312 aa12.68□□□□□ -0.38
PKP3-209ENST00000533069 DMRT1Q9Y5R6 373 aa12.68□□□□□ -0.38
PKP3-209ENST00000533069 PPP5D1E7EU14 171 aa12.67□□□□□ -0.38
PKP3-209ENST00000533069 LGALS9O00182 355 aa12.67□□□□□ -0.38
PKP3-209ENST00000533069 IFNA17P01571 189 aa12.67□□□□□ -0.38
PKP3-209ENST00000533069 ARL3P36405 182 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms