RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 C19orf35Q6ZS72 473 aa8.73□□□□□ -1.01
TRAPPC4-211ENST00000533012 OR1P1Q8NH06 330 aa8.73□□□□□ -1.01
TRAPPC4-211ENST00000533012 C4orf3Q8WVX3 66 aa8.73□□□□□ -1.01
TRAPPC4-211ENST00000533012 FANCD2OSQ96PS1 177 aa8.73□□□□□ -1.01
TRAPPC4-211ENST00000533012 OR5B12Q96R08 314 aa8.73□□□□□ -1.01
TRAPPC4-211ENST00000533012 P2RX4Q99571 388 aa8.73□□□□□ -1.01
TRAPPC4-211ENST00000533012 NMES1Q9C002 83 aa8.73□□□□□ -1.01
TRAPPC4-211ENST00000533012 GNB4Q9HAV0 340 aa8.73□□□□□ -1.01
TRAPPC4-211ENST00000533012 GSKIPQ9P0R6 139 aa8.73□□□□□ -1.01
TRAPPC4-211ENST00000533012 UBQLN2Q9UHD9 624 aa8.73□□□□□ -1.01
TRAPPC4-211ENST00000533012 KLK9Q9UKQ9 250 aa8.73□□□□□ -1.01
TRAPPC4-211ENST00000533012 F11RQ9Y624 299 aaKnown RBP8.73□□□□□ -1.01
TRAPPC4-211ENST00000533012 DNHD1Q96M86 4753 aa8.73□□□□□ -1.01
TRAPPC4-211ENST00000533012 IGLV11-55A0A075B6I3 123 aa8.72□□□□□ -1.01
TRAPPC4-211ENST00000533012 FXYD6-FXYD2A0A087WZ82 144 aa8.72□□□□□ -1.01
TRAPPC4-211ENST00000533012 IGHV3-11P01762 117 aa8.72□□□□□ -1.01
TRAPPC4-211ENST00000533012 SLC25A4P12235 298 aa8.72□□□□□ -1.01
TRAPPC4-211ENST00000533012 HTR2BP41595 481 aa8.72□□□□□ -1.01
TRAPPC4-211ENST00000533012 NKX2-1P43699 371 aaPredicted RBP8.72□□□□□ -1.01
TRAPPC4-211ENST00000533012 AP2S1P53680 142 aaPredicted RBP8.72□□□□□ -1.01
TRAPPC4-211ENST00000533012 OR2F1Q13607 317 aa8.72□□□□□ -1.01
TRAPPC4-211ENST00000533012 ZNF345Q14585 488 aa8.72□□□□□ -1.01
TRAPPC4-211ENST00000533012 OPCMLQ14982 345 aa8.72□□□□□ -1.01
TRAPPC4-211ENST00000533012 IAH1Q2TAA2 248 aaPredicted RBP8.72□□□□□ -1.01
TRAPPC4-211ENST00000533012 C15orf32Q32M92 178 aa8.72□□□□□ -1.01
TRAPPC4-211ENST00000533012 LAMTOR1Q6IAA8 161 aa8.72□□□□□ -1.01
TRAPPC4-211ENST00000533012 TEX261Q6UWH6 196 aa8.72□□□□□ -1.01
TRAPPC4-211ENST00000533012 C18orf65Q6ZTR6 163 aa8.72□□□□□ -1.01
TRAPPC4-211ENST00000533012 C8orf86Q6ZUL3 223 aa8.72□□□□□ -1.01
TRAPPC4-211ENST00000533012 ZNF114Q8NC26 417 aa8.72□□□□□ -1.01
TRAPPC4-211ENST00000533012 DTD1Q8TEA8 209 aa8.72□□□□□ -1.01
TRAPPC4-211ENST00000533012 OR10C1Q96KK4 312 aa8.72□□□□□ -1.01
TRAPPC4-211ENST00000533012 CXorf58Q96LI9 332 aa8.72□□□□□ -1.01
TRAPPC4-211ENST00000533012 RBKSQ9H477 322 aa8.72□□□□□ -1.01
TRAPPC4-211ENST00000533012 U3KQ87 197 aa8.72□□□□□ -1.01
TRAPPC4-211ENST00000533012 PLXNB1O43157 2135 aa8.72□□□□□ -1.01
TRAPPC4-211ENST00000533012 ANK2Q01484 3957 aa8.71□□□□□ -1.01
TRAPPC4-211ENST00000533012 KANTRA0A1W2PQU2 76 aa8.71□□□□□ -1.02
TRAPPC4-211ENST00000533012 I3L521 148 aa8.71□□□□□ -1.02
TRAPPC4-211ENST00000533012 CCL24O00175 119 aa8.71□□□□□ -1.02
TRAPPC4-211ENST00000533012 CCSO14618 274 aa8.71□□□□□ -1.02
TRAPPC4-211ENST00000533012 NDUFB8O95169 186 aa8.71□□□□□ -1.02
TRAPPC4-211ENST00000533012 LY86O95711 162 aa8.71□□□□□ -1.02
TRAPPC4-211ENST00000533012 HSPB1P04792 205 aaKnown RBP8.71□□□□□ -1.02
TRAPPC4-211ENST00000533012 LGALS1P09382 135 aaKnown RBP8.71□□□□□ -1.02
TRAPPC4-211ENST00000533012 MYCNOSP40205 109 aa8.71□□□□□ -1.02
TRAPPC4-211ENST00000533012 H2BFSP57053 126 aa8.71□□□□□ -1.02
TRAPPC4-211ENST00000533012 RUNX1Q01196 453 aa8.71□□□□□ -1.02
TRAPPC4-211ENST00000533012 ID3Q02535 119 aa8.71□□□□□ -1.02
TRAPPC4-211ENST00000533012 LGALSLQ3ZCW2 172 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC4-211ENST00000533012 C11orf87Q6NUJ2 197 aa8.71□□□□□ -1.02
TRAPPC4-211ENST00000533012 ZNF343Q6P1L6 599 aa8.71□□□□□ -1.02
TRAPPC4-211ENST00000533012 INO80EQ8NBZ0 244 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC4-211ENST00000533012 OR11H4Q8NGC9 324 aa8.71□□□□□ -1.02
TRAPPC4-211ENST00000533012 OR1N2Q8NGR9 330 aa8.71□□□□□ -1.02
TRAPPC4-211ENST00000533012 DPF1Q92782 380 aa8.71□□□□□ -1.02
TRAPPC4-211ENST00000533012 C2orf50Q96LR7 162 aa8.71□□□□□ -1.02
TRAPPC4-211ENST00000533012 MFFQ9GZY8 342 aa8.71□□□□□ -1.02
TRAPPC4-211ENST00000533012 BOLA1Q9Y3E2 137 aa8.71□□□□□ -1.02
TRAPPC4-211ENST00000533012 DMRT1Q9Y5R6 373 aa8.71□□□□□ -1.02
TRAPPC4-211ENST00000533012 STAB1Q9NY15 2570 aa8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 CORTO00230 105 aa8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 WRBO00258 174 aa8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 ARPC5O15511 151 aa8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 SYNGR2O43760 224 aa8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 IFNA10P01566 189 aa8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 PF4P02776 101 aa8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 RNASE2P10153 161 aaKnown RBP8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 MFAP2P55001 183 aa8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 ATP5IP56385 69 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 EIF5AP63241 154 aaKnown RBP8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 RPP30P78346 268 aaKnown RBP8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 DEFA5Q01523 94 aa8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 FAM209BQ5JX69 171 aa8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 ZNF546Q86UE3 836 aa8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 SLC51BQ86UW2 128 aa8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 ZNF680Q8NEM1 530 aa8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 SLC24A4Q8NFF2 622 aa8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 OR11H1Q8NG94 326 aa8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 OR4D5Q8NGN0 318 aa8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 VN1R17PQ8TDU5 208 aa8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 EEF1AKMT3Q96AZ1 226 aa8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 MISP3Q96FF7 219 aa8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 CIB3Q96Q77 187 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 ARL6Q9H0F7 186 aa8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 MAGT1Q9H0U3 335 aa8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 PEF1Q9UBV8 284 aaKnown RBP8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 TNCP24821 2201 aa8.7□□□□□ -1.02
TRAPPC4-211ENST00000533012 TRBV7-1A0A0A6YYK4 115 aa8.69□□□□□ -1.02
TRAPPC4-211ENST00000533012 ANKRD34BA5PLL1 514 aa8.69□□□□□ -1.02
TRAPPC4-211ENST00000533012 SIX6O95475 246 aa8.69□□□□□ -1.02
TRAPPC4-211ENST00000533012 TSPAN15O95858 294 aa8.69□□□□□ -1.02
TRAPPC4-211ENST00000533012 SCGB1D2O95969 90 aa8.69□□□□□ -1.02
TRAPPC4-211ENST00000533012 RLN2P04090 185 aa8.69□□□□□ -1.02
TRAPPC4-211ENST00000533012 POLR2GP62487 172 aaKnown RBP eCLIP8.69□□□□□ -1.02
TRAPPC4-211ENST00000533012 EXOSC2Q13868 293 aaKnown RBP8.69□□□□□ -1.02
TRAPPC4-211ENST00000533012 DEFB136Q30KP8 78 aa8.69□□□□□ -1.02
TRAPPC4-211ENST00000533012 BSXQ3C1V8 233 aa8.69□□□□□ -1.02
TRAPPC4-211ENST00000533012 C2orf83Q53S99 150 aa8.69□□□□□ -1.02
TRAPPC4-211ENST00000533012 PVRIGQ6DKI7 326 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms