RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 AMY1AP04745 511 aa8.97□□□□□ -0.97
COLCA1-203ENST00000532918 SNRPCP09234 159 aaKnown RBP8.97□□□□□ -0.97
COLCA1-203ENST00000532918 OR9G9P0C7N8 305 aa8.97□□□□□ -0.97
COLCA1-203ENST00000532918 CD33P20138 364 aa8.97□□□□□ -0.97
COLCA1-203ENST00000532918 PVRIGQ6DKI7 326 aa8.97□□□□□ -0.97
COLCA1-203ENST00000532918 IGFL3Q6UXB1 125 aa8.97□□□□□ -0.97
COLCA1-203ENST00000532918 IGHV3OR16-13A0A075B7E8 117 aa8.97□□□□□ -0.97
COLCA1-203ENST00000532918 IGHV3-74A0A0B4J1X5 117 aa8.97□□□□□ -0.97
COLCA1-203ENST00000532918 HSPB1P04792 205 aaKnown RBP8.97□□□□□ -0.97
COLCA1-203ENST00000532918 C1QTNF9P0C862 333 aa8.97□□□□□ -0.97
COLCA1-203ENST00000532918 CRYGSP22914 178 aa8.97□□□□□ -0.97
COLCA1-203ENST00000532918 MEF2BQ02080 365 aaPredicted RBP8.97□□□□□ -0.97
COLCA1-203ENST00000532918 ZNF79Q15937 498 aa8.97□□□□□ -0.97
COLCA1-203ENST00000532918 C2orf83Q53S99 150 aa8.97□□□□□ -0.97
COLCA1-203ENST00000532918 PRSS33Q8NF86 280 aa8.97□□□□□ -0.97
COLCA1-203ENST00000532918 THADAQ6YHU6 1953 aa8.96□□□□□ -0.97
COLCA1-203ENST00000532918 RIPPLY3P57055 190 aa8.96□□□□□ -0.97
COLCA1-203ENST00000532918 VMO1Q7Z5L0 202 aa8.96□□□□□ -0.97
COLCA1-203ENST00000532918 MARVELD3Q96A59 401 aa8.96□□□□□ -0.97
COLCA1-203ENST00000532918 SDF2L1Q9HCN8 221 aa8.96□□□□□ -0.97
COLCA1-203ENST00000532918 TRAV41A0A0B4J266 112 aa8.96□□□□□ -0.97
COLCA1-203ENST00000532918 C7orf66A4D0T2 115 aa8.96□□□□□ -0.97
COLCA1-203ENST00000532918 GOLT1AQ6ZVE7 132 aa8.96□□□□□ -0.97
COLCA1-203ENST00000532918 SRSF12Q8WXF0 261 aaKnown RBP8.96□□□□□ -0.97
COLCA1-203ENST00000532918 PRELID3AQ96N28 172 aa8.96□□□□□ -0.97
COLCA1-203ENST00000532918 RNF5Q99942 180 aa8.96□□□□□ -0.97
COLCA1-203ENST00000532918 C5orf66Q9H5L9 145 aa8.96□□□□□ -0.97
COLCA1-203ENST00000532918 THSD7BQ9C0I4 1608 aa8.96□□□□□ -0.97
COLCA1-203ENST00000532918 OTOFQ9HC10 1997 aa8.96□□□□□ -0.98
COLCA1-203ENST00000532918 OR11H12B2RN74 326 aa8.96□□□□□ -0.98
COLCA1-203ENST00000532918 UPK2O00526 184 aa8.96□□□□□ -0.98
COLCA1-203ENST00000532918 ATOH7Q8N100 152 aa8.96□□□□□ -0.98
COLCA1-203ENST00000532918 OR11H1Q8NG94 326 aa8.96□□□□□ -0.98
COLCA1-203ENST00000532918 OR11H2Q8NH07 326 aa8.96□□□□□ -0.98
COLCA1-203ENST00000532918 KCNS1Q96KK3 526 aa8.96□□□□□ -0.98
COLCA1-203ENST00000532918 GEMIN7Q9H840 131 aaKnown RBP8.96□□□□□ -0.98
COLCA1-203ENST00000532918 CRIM1Q9NZV1 1036 aa8.96□□□□□ -0.98
COLCA1-203ENST00000532918 SAA2-SAA4A0A096LPE2 208 aa8.96□□□□□ -0.98
COLCA1-203ENST00000532918 TRAV14DV4A0A0A6YYC5 116 aa8.96□□□□□ -0.98
COLCA1-203ENST00000532918 C7orf71A4D174 169 aa8.96□□□□□ -0.98
COLCA1-203ENST00000532918 DPRXA6NFQ7 191 aa8.96□□□□□ -0.98
COLCA1-203ENST00000532918 MPTX1A8MV57 137 aa8.96□□□□□ -0.98
COLCA1-203ENST00000532918 TMEM178BH3BS89 294 aa8.96□□□□□ -0.98
COLCA1-203ENST00000532918 SAA2P0DJI9 122 aaPredicted RBP8.96□□□□□ -0.98
COLCA1-203ENST00000532918 ARL14EPLP0DKL9 152 aa8.96□□□□□ -0.98
COLCA1-203ENST00000532918 MEIG1Q5JSS6 88 aa8.96□□□□□ -0.98
COLCA1-203ENST00000532918 LDLRAD4O15165 306 aa8.95□□□□□ -0.98
COLCA1-203ENST00000532918 DEFB121Q5J5C9 76 aa8.95□□□□□ -0.98
COLCA1-203ENST00000532918 ZNF324BQ6AW86 544 aaPredicted RBP8.95□□□□□ -0.98
COLCA1-203ENST00000532918 OR5AC2Q9NZP5 309 aa8.95□□□□□ -0.98
COLCA1-203ENST00000532918 TBL2Q9Y4P3 447 aaKnown RBP8.95□□□□□ -0.98
COLCA1-203ENST00000532918 C9JCJ5 164 aa8.95□□□□□ -0.98
COLCA1-203ENST00000532918 SAP30O75446 220 aa8.95□□□□□ -0.98
COLCA1-203ENST00000532918 CCL1P22362 96 aa8.95□□□□□ -0.98
COLCA1-203ENST00000532918 RHOGP84095 191 aa8.95□□□□□ -0.98
COLCA1-203ENST00000532918 SCN5AQ14524 2016 aa8.95□□□□□ -0.98
COLCA1-203ENST00000532918 UBE2DNLQ8IWF7 75 aa8.95□□□□□ -0.98
COLCA1-203ENST00000532918 ZNF815PA8K554 130 aa8.95□□□□□ -0.98
COLCA1-203ENST00000532918 TIMM23O14925 209 aa8.95□□□□□ -0.98
COLCA1-203ENST00000532918 ICAM4Q14773 271 aa8.95□□□□□ -0.98
COLCA1-203ENST00000532918 ZCCHC24Q8N2G6 241 aaKnown RBP8.95□□□□□ -0.98
COLCA1-203ENST00000532918 C5orf30Q96GV9 206 aa8.95□□□□□ -0.98
COLCA1-203ENST00000532918 IGHV3-49A0A0A0MS15 119 aa8.95□□□□□ -0.98
COLCA1-203ENST00000532918 SAA1P0DJI8 122 aaPredicted RBP8.95□□□□□ -0.98
COLCA1-203ENST00000532918 TMEM155Q4W5P6 130 aa8.95□□□□□ -0.98
COLCA1-203ENST00000532918 MORN2Q502X0 79 aa8.95□□□□□ -0.98
COLCA1-203ENST00000532918 RNF166Q96A37 237 aaPredicted RBP8.95□□□□□ -0.98
COLCA1-203ENST00000532918 C17orf98A8MV24 154 aa8.95□□□□□ -0.98
COLCA1-203ENST00000532918 LINC00587B1AMM8 73 aa8.95□□□□□ -0.98
COLCA1-203ENST00000532918 SRRM5B3KS81 715 aa8.95□□□□□ -0.98
COLCA1-203ENST00000532918 RRHO14718 337 aa8.95□□□□□ -0.98
COLCA1-203ENST00000532918 IL6RP08887 468 aaPredicted RBP8.95□□□□□ -0.98
COLCA1-203ENST00000532918 SRIP30626 198 aa8.95□□□□□ -0.98
COLCA1-203ENST00000532918 AQP10Q96PS8 301 aa8.95□□□□□ -0.98
COLCA1-203ENST00000532918 ZNF257Q9Y2Q1 563 aa8.95□□□□□ -0.98
COLCA1-203ENST00000532918 IGHV3-66A0A0C4DH42 116 aa8.94□□□□□ -0.98
COLCA1-203ENST00000532918 A0A1B0GTI1 187 aa8.94□□□□□ -0.98
COLCA1-203ENST00000532918 TBX6O95947 436 aaPredicted RBP8.94□□□□□ -0.98
COLCA1-203ENST00000532918 NBEAP1P0C6P0 100 aa8.94□□□□□ -0.98
COLCA1-203ENST00000532918 CACNG7P62955 275 aa8.94□□□□□ -0.98
COLCA1-203ENST00000532918 TMEM249Q2WGJ8 235 aa8.94□□□□□ -0.98
COLCA1-203ENST00000532918 ZNF497Q6ZNH5 498 aa8.94□□□□□ -0.98
COLCA1-203ENST00000532918 C1QL2Q7Z5L3 287 aa8.94□□□□□ -0.98
COLCA1-203ENST00000532918 SSBP4Q9BWG4 385 aaPredicted RBP8.94□□□□□ -0.98
COLCA1-203ENST00000532918 TRBV9A0A0B4J1U6 114 aa8.94□□□□□ -0.98
COLCA1-203ENST00000532918 PLPPR1Q8TBJ4 325 aa8.94□□□□□ -0.98
COLCA1-203ENST00000532918 A6NNC1 897 aa8.94□□□□□ -0.98
COLCA1-203ENST00000532918 UCP1P25874 307 aa8.94□□□□□ -0.98
COLCA1-203ENST00000532918 GAGE2BQ13066 116 aa8.94□□□□□ -0.98
COLCA1-203ENST00000532918 GAGE2EQ4V326 116 aa8.94□□□□□ -0.98
COLCA1-203ENST00000532918 LHFPL4Q7Z7J7 247 aa8.94□□□□□ -0.98
COLCA1-203ENST00000532918 PGPEP1Q9NXJ5 209 aa8.94□□□□□ -0.98
COLCA1-203ENST00000532918 GAGE2DQ9UEU5 116 aa8.94□□□□□ -0.98
COLCA1-203ENST00000532918 TRBV6-7A0A0A0MS04 114 aa8.94□□□□□ -0.98
COLCA1-203ENST00000532918 GCHFRP30047 84 aa8.94□□□□□ -0.98
COLCA1-203ENST00000532918 FOXC2Q99958 501 aa8.94□□□□□ -0.98
COLCA1-203ENST00000532918 IGHV2-26A0A0B4J1V2 119 aa8.93□□□□□ -0.98
COLCA1-203ENST00000532918 MST1P26927 711 aa8.93□□□□□ -0.98
COLCA1-203ENST00000532918 FBLN7Q53RD9 439 aa8.93□□□□□ -0.98
COLCA1-203ENST00000532918 GPHA2Q96T91 129 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms