RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 S4R3C0 116 aa17.21■□□□□ 0.35
LRRK1-208ENST00000532029 IGHV4OR15-8A0A075B7B6 117 aa17.2■□□□□ 0.34
LRRK1-208ENST00000532029 A0A087WW49 117 aa17.2■□□□□ 0.34
LRRK1-208ENST00000532029 MFSD2BA6NFX1 497 aa17.2■□□□□ 0.34
LRRK1-208ENST00000532029 CORTO00230 105 aa17.2■□□□□ 0.34
LRRK1-208ENST00000532029 IGHV3-23P01764 117 aa17.2■□□□□ 0.34
LRRK1-208ENST00000532029 NKX2-1P43699 371 aaPredicted RBP17.2■□□□□ 0.34
LRRK1-208ENST00000532029 FHL3Q13643 280 aa17.2■□□□□ 0.34
LRRK1-208ENST00000532029 GSG1LQ6UXU4 331 aa17.2■□□□□ 0.34
LRRK1-208ENST00000532029 OR4D5Q8NGN0 318 aa17.2■□□□□ 0.34
LRRK1-208ENST00000532029 PINX1Q96BK5 328 aaKnown RBP17.2■□□□□ 0.34
LRRK1-208ENST00000532029 MAGT1Q9H0U3 335 aa17.2■□□□□ 0.34
LRRK1-208ENST00000532029 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.19■□□□□ 0.34
LRRK1-208ENST00000532029 TRBV7-1A0A0A6YYK4 115 aa17.19■□□□□ 0.34
LRRK1-208ENST00000532029 WRBO00258 174 aa17.19■□□□□ 0.34
LRRK1-208ENST00000532029 SYNGR2O43760 224 aa17.19■□□□□ 0.34
LRRK1-208ENST00000532029 SSNA1O43805 119 aa17.19■□□□□ 0.34
LRRK1-208ENST00000532029 SCGB1D2O95969 90 aa17.19■□□□□ 0.34
LRRK1-208ENST00000532029 IFNA10P01566 189 aa17.19■□□□□ 0.34
LRRK1-208ENST00000532029 CD33P20138 364 aa17.19■□□□□ 0.34
LRRK1-208ENST00000532029 TATDN3Q17R31 274 aa17.19■□□□□ 0.34
LRRK1-208ENST00000532029 BSXQ3C1V8 233 aa17.19■□□□□ 0.34
LRRK1-208ENST00000532029 NOXA1Q86UR1 476 aa17.19■□□□□ 0.34
LRRK1-208ENST00000532029 CIB3Q96Q77 187 aaPredicted RBP17.19■□□□□ 0.34
LRRK1-208ENST00000532029 IGHV3-21A0A0B4J1V1 117 aa17.18■□□□□ 0.34
LRRK1-208ENST00000532029 IAPPP10997 89 aa17.18■□□□□ 0.34
LRRK1-208ENST00000532029 ZP3P21754 424 aa17.18■□□□□ 0.34
LRRK1-208ENST00000532029 NPY1RP25929 384 aa17.18■□□□□ 0.34
LRRK1-208ENST00000532029 ID3Q02535 119 aa17.18■□□□□ 0.34
LRRK1-208ENST00000532029 C2orf83Q53S99 150 aa17.18■□□□□ 0.34
LRRK1-208ENST00000532029 C11orf87Q6NUJ2 197 aa17.18■□□□□ 0.34
LRRK1-208ENST00000532029 CLEC19AQ6UXS0 136 aa17.18■□□□□ 0.34
LRRK1-208ENST00000532029 LINC00482Q8N8I6 264 aa17.18■□□□□ 0.34
LRRK1-208ENST00000532029 ZNF502Q8TBZ5 544 aa17.18■□□□□ 0.34
LRRK1-208ENST00000532029 U3KQ87 197 aa17.18■□□□□ 0.34
LRRK1-208ENST00000532029 K7EIM0 57 aa17.17■□□□□ 0.34
LRRK1-208ENST00000532029 GOSR2O14653 212 aa17.17■□□□□ 0.34
LRRK1-208ENST00000532029 LY86O95711 162 aa17.17■□□□□ 0.34
LRRK1-208ENST00000532029 MT-CO2P00403 227 aa17.17■□□□□ 0.34
LRRK1-208ENST00000532029 TRBV12-3P01733 135 aa17.17■□□□□ 0.34
LRRK1-208ENST00000532029 SCARB1Q8WTV0 552 aa17.17■□□□□ 0.34
LRRK1-208ENST00000532029 C2orf50Q96LR7 162 aa17.17■□□□□ 0.34
LRRK1-208ENST00000532029 CCDC140Q96MF4 163 aa17.17■□□□□ 0.34
LRRK1-208ENST00000532029 C21orf62Q9NYP8 219 aa17.17■□□□□ 0.34
LRRK1-208ENST00000532029 C7orf66A4D0T2 115 aa17.16■□□□□ 0.34
LRRK1-208ENST00000532029 I3L2K1 104 aa17.16■□□□□ 0.34
LRRK1-208ENST00000532029 SLURP1P55000 103 aa17.16■□□□□ 0.34
LRRK1-208ENST00000532029 ATP5IP56385 69 aaPredicted RBP17.16■□□□□ 0.34
LRRK1-208ENST00000532029 POLR2GP62487 172 aaKnown RBP eCLIP17.16■□□□□ 0.34
LRRK1-208ENST00000532029 PVRIGQ6DKI7 326 aa17.16■□□□□ 0.34
LRRK1-208ENST00000532029 ALG5Q9Y673 324 aa17.16■□□□□ 0.34
LRRK1-208ENST00000532029 HOXD3P31249 432 aaPredicted RBP17.15■□□□□ 0.34
LRRK1-208ENST00000532029 ARL3P36405 182 aa17.15■□□□□ 0.34
LRRK1-208ENST00000532029 OPRK1P41145 380 aa17.15■□□□□ 0.34
LRRK1-208ENST00000532029 RPP30P78346 268 aaKnown RBP17.15■□□□□ 0.34
LRRK1-208ENST00000532029 RPEL1Q2QD12 228 aa17.15■□□□□ 0.34
LRRK1-208ENST00000532029 RNASEH2CQ8TDP1 164 aaKnown RBP17.15■□□□□ 0.34
LRRK1-208ENST00000532029 RPS10-NUDT3A0A1W2PQS6 291 aa17.14■□□□□ 0.33
LRRK1-208ENST00000532029 PPP5D1E7EU14 171 aa17.14■□□□□ 0.33
LRRK1-208ENST00000532029 BMPR1BO00238 502 aa17.14■□□□□ 0.33
LRRK1-208ENST00000532029 SSSCA1O60232 199 aa17.14■□□□□ 0.33
LRRK1-208ENST00000532029 GGCTO75223 188 aaKnown RBP17.14■□□□□ 0.33
LRRK1-208ENST00000532029 CLEC3BP05452 202 aa17.14■□□□□ 0.33
LRRK1-208ENST00000532029 GPR183P32249 361 aa17.14■□□□□ 0.33
LRRK1-208ENST00000532029 MFAP4P55083 255 aa17.14■□□□□ 0.33
LRRK1-208ENST00000532029 OXA1LQ15070 435 aa17.14■□□□□ 0.33
LRRK1-208ENST00000532029 Q56UQ5 140 aa17.14■□□□□ 0.33
LRRK1-208ENST00000532029 UBAC2Q8NBM4 344 aa17.14■□□□□ 0.33
LRRK1-208ENST00000532029 WFDC9Q8NEX5 89 aa17.14■□□□□ 0.33
LRRK1-208ENST00000532029 ATP6V0BQ99437 205 aa17.14■□□□□ 0.33
LRRK1-208ENST00000532029 GAR1Q9NY12 217 aaKnown RBP17.14■□□□□ 0.33
LRRK1-208ENST00000532029 PAIP2BQ9ULR5 123 aaKnown RBP17.14■□□□□ 0.33
LRRK1-208ENST00000532029 IFNA4P05014 189 aa17.13■□□□□ 0.33
LRRK1-208ENST00000532029 RAB11AP62491 216 aa17.13■□□□□ 0.33
LRRK1-208ENST00000532029 ACSM6Q6P461 480 aa17.13■□□□□ 0.33
LRRK1-208ENST00000532029 TMEM170AQ8WVE7 144 aa17.13■□□□□ 0.33
LRRK1-208ENST00000532029 DCUN1D4Q92564 292 aa17.13■□□□□ 0.33
LRRK1-208ENST00000532029 SIX6O95475 246 aa17.12■□□□□ 0.33
LRRK1-208ENST00000532029 IGHV3-48P01763 117 aa17.12■□□□□ 0.33
LRRK1-208ENST00000532029 MBPP02686 304 aaPredicted RBP17.12■□□□□ 0.33
LRRK1-208ENST00000532029 DLX4Q92988 240 aaPredicted RBP17.12■□□□□ 0.33
LRRK1-208ENST00000532029 RCC1LQ96I51 464 aaKnown RBP17.12■□□□□ 0.33
LRRK1-208ENST00000532029 RAB40CQ96S21 281 aa17.12■□□□□ 0.33
LRRK1-208ENST00000532029 TXN2Q99757 166 aa17.12■□□□□ 0.33
LRRK1-208ENST00000532029 MCRIP2Q9BUT9 160 aaKnown RBP17.12■□□□□ 0.33
LRRK1-208ENST00000532029 OR2T8A6NH00 312 aa17.11■□□□□ 0.33
LRRK1-208ENST00000532029 OVOL1O14753 267 aa17.11■□□□□ 0.33
LRRK1-208ENST00000532029 TGOLN2O43493 480 aa17.11■□□□□ 0.33
LRRK1-208ENST00000532029 NPBWR1P48145 328 aa17.11■□□□□ 0.33
LRRK1-208ENST00000532029 SPANXN5Q5MJ07 72 aa17.11■□□□□ 0.33
LRRK1-208ENST00000532029 ETFRF1Q6IPR1 90 aa17.11■□□□□ 0.33
LRRK1-208ENST00000532029 BSCL2Q96G97 398 aaPredicted RBP17.11■□□□□ 0.33
LRRK1-208ENST00000532029 ZC4H2Q9NQZ6 224 aa17.11■□□□□ 0.33
LRRK1-208ENST00000532029 PSENENQ9NZ42 101 aa17.11■□□□□ 0.33
LRRK1-208ENST00000532029 MGAT4CQ9UBM8 478 aa17.11■□□□□ 0.33
LRRK1-208ENST00000532029 RCL1Q9Y2P8 373 aaKnown RBP17.11■□□□□ 0.33
LRRK1-208ENST00000532029 LSM5Q9Y4Y9 91 aaKnown RBP17.11■□□□□ 0.33
LRRK1-208ENST00000532029 C15orf62A8K5M9 175 aa17.1■□□□□ 0.33
LRRK1-208ENST00000532029 H3BP45 60 aa17.1■□□□□ 0.33
LRRK1-208ENST00000532029 L7N2F9 121 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms