RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 FAM223AQ8IWN6 122 aa13□□□□□ -0.33
PKP3-208ENST00000531857 INO80EQ8NBZ0 244 aaPredicted RBP13□□□□□ -0.33
PKP3-208ENST00000531857 DDB2Q92466 427 aa13□□□□□ -0.33
PKP3-208ENST00000531857 IL22RA2Q969J5 263 aa13□□□□□ -0.33
PKP3-208ENST00000531857 FXYD6Q9H0Q3 95 aa13□□□□□ -0.33
PKP3-208ENST00000531857 SLC2A9Q9NRM0 540 aa13□□□□□ -0.33
PKP3-208ENST00000531857 OR2W1Q9Y3N9 320 aa13□□□□□ -0.33
PKP3-208ENST00000531857 LINC00473A8K010 186 aa12.99□□□□□ -0.33
PKP3-208ENST00000531857 CRYZL1O95825 349 aa12.99□□□□□ -0.33
PKP3-208ENST00000531857 RLN2P04090 185 aa12.99□□□□□ -0.33
PKP3-208ENST00000531857 S100A1P23297 94 aa12.99□□□□□ -0.33
PKP3-208ENST00000531857 TAGLNQ01995 201 aaKnown RBP12.99□□□□□ -0.33
PKP3-208ENST00000531857 OPCMLQ14982 345 aa12.99□□□□□ -0.33
PKP3-208ENST00000531857 VMA21Q3ZAQ7 101 aa12.99□□□□□ -0.33
PKP3-208ENST00000531857 ACOT7LQ6ZUV0 252 aa12.99□□□□□ -0.33
PKP3-208ENST00000531857 FAM210AQ96ND0 272 aa12.99□□□□□ -0.33
PKP3-208ENST00000531857 MFFQ9GZY8 342 aa12.99□□□□□ -0.33
PKP3-208ENST00000531857 ZNF430Q9H8G1 570 aaPredicted RBP12.99□□□□□ -0.33
PKP3-208ENST00000531857 TMED3Q9Y3Q3 217 aa12.99□□□□□ -0.33
PKP3-208ENST00000531857 OR2J3O76001 311 aa12.98□□□□□ -0.33
PKP3-208ENST00000531857 OR2C1O95371 312 aa12.98□□□□□ -0.33
PKP3-208ENST00000531857 SIX6O95475 246 aa12.98□□□□□ -0.33
PKP3-208ENST00000531857 RRASP10301 218 aa12.98□□□□□ -0.33
PKP3-208ENST00000531857 C15orf32Q32M92 178 aa12.98□□□□□ -0.33
PKP3-208ENST00000531857 C10orf55Q5SWW7 151 aa12.98□□□□□ -0.33
PKP3-208ENST00000531857 TEX261Q6UWH6 196 aa12.98□□□□□ -0.33
PKP3-208ENST00000531857 H1FOOQ8IZA3 346 aaPredicted RBP12.98□□□□□ -0.33
PKP3-208ENST00000531857 NECAP1Q8NC96 275 aa12.98□□□□□ -0.33
PKP3-208ENST00000531857 PPP1R1CQ8WVI7 109 aa12.98□□□□□ -0.33
PKP3-208ENST00000531857 CACNG8Q8WXS5 425 aa12.98□□□□□ -0.33
PKP3-208ENST00000531857 SPIN2AQ99865 258 aa12.98□□□□□ -0.33
PKP3-208ENST00000531857 SPIN2BQ9BPZ2 258 aa12.98□□□□□ -0.33
PKP3-208ENST00000531857 OVOL2Q9BRP0 275 aa12.98□□□□□ -0.33
PKP3-208ENST00000531857 BOLA1Q9Y3E2 137 aa12.98□□□□□ -0.33
PKP3-208ENST00000531857 U3KQ87 197 aa12.98□□□□□ -0.33
PKP3-208ENST00000531857 FXYD6-FXYD2A0A087WZ82 144 aa12.97□□□□□ -0.33
PKP3-208ENST00000531857 FAM25EA8MYX2 175 aa12.97□□□□□ -0.33
PKP3-208ENST00000531857 MPC2O95563 127 aa12.97□□□□□ -0.33
PKP3-208ENST00000531857 DUTP33316 252 aaKnown RBP12.97□□□□□ -0.33
PKP3-208ENST00000531857 RAB14P61106 215 aa12.97□□□□□ -0.33
PKP3-208ENST00000531857 TMEM187Q14656 261 aa12.97□□□□□ -0.33
PKP3-208ENST00000531857 SMCO1Q147U7 214 aa12.97□□□□□ -0.33
PKP3-208ENST00000531857 C19orf35Q6ZS72 473 aa12.97□□□□□ -0.33
PKP3-208ENST00000531857 TMUB2Q71RG4 321 aa12.97□□□□□ -0.33
PKP3-208ENST00000531857 SLC51BQ86UW2 128 aa12.97□□□□□ -0.33
PKP3-208ENST00000531857 TTC9CQ8N5M4 171 aa12.97□□□□□ -0.33
PKP3-208ENST00000531857 SLC5A7Q9GZV3 580 aa12.97□□□□□ -0.33
PKP3-208ENST00000531857 TECRQ9NZ01 308 aaKnown RBP12.97□□□□□ -0.33
PKP3-208ENST00000531857 ARPC5O15511 151 aa12.96□□□□□ -0.33
PKP3-208ENST00000531857 CDS2O95674 445 aa12.96□□□□□ -0.33
PKP3-208ENST00000531857 SAA1P0DJI8 122 aaPredicted RBP12.96□□□□□ -0.33
PKP3-208ENST00000531857 CBLN1P23435 193 aa12.96□□□□□ -0.33
PKP3-208ENST00000531857 AP2S1P53680 142 aaPredicted RBP12.96□□□□□ -0.33
PKP3-208ENST00000531857 FXYD4P59646 89 aa12.96□□□□□ -0.33
PKP3-208ENST00000531857 EIF5AP63241 154 aaKnown RBP12.96□□□□□ -0.33
PKP3-208ENST00000531857 EWSR1Q01844 656 aaKnown RBP eCLIP12.96□□□□□ -0.337e-6■■■□□ 16.7
PKP3-208ENST00000531857 PMS2P11Q13670 270 aa12.96□□□□□ -0.33
PKP3-208ENST00000531857 ANKRD55Q3KP44 614 aa12.96□□□□□ -0.33
PKP3-208ENST00000531857 Q5BKY6 102 aa12.96□□□□□ -0.33
PKP3-208ENST00000531857 PRSS54Q6PEW0 395 aa12.96□□□□□ -0.33
PKP3-208ENST00000531857 TMEM61Q8N0U2 210 aa12.96□□□□□ -0.33
PKP3-208ENST00000531857 KCNRGQ8N5I3 272 aa12.96□□□□□ -0.33
PKP3-208ENST00000531857 TMEM56Q96MV1 263 aa12.96□□□□□ -0.33
PKP3-208ENST00000531857 FAM212BQ9NTI7 297 aaPredicted RBP12.96□□□□□ -0.33
PKP3-208ENST00000531857 UBQLN2Q9UHD9 624 aa12.96□□□□□ -0.33
PKP3-208ENST00000531857 TNFSF18Q9UNG2 199 aa12.96□□□□□ -0.33
PKP3-208ENST00000531857 RBM7Q9Y580 266 aaKnown RBP12.96□□□□□ -0.33
PKP3-208ENST00000531857 TMEM56-RWDD3S4R434 201 aa12.96□□□□□ -0.33
PKP3-208ENST00000531857 C3orf85A0A1B0GTC6 90 aa12.95□□□□□ -0.34
PKP3-208ENST00000531857 KANTRA0A1W2PQU2 76 aa12.95□□□□□ -0.34
PKP3-208ENST00000531857 LGALS9O00182 355 aa12.95□□□□□ -0.34
PKP3-208ENST00000531857 GGCTO75223 188 aaKnown RBP12.95□□□□□ -0.34
PKP3-208ENST00000531857 ATP6V1G1O75348 118 aa12.95□□□□□ -0.34
PKP3-208ENST00000531857 IGHV3-23P01764 117 aa12.95□□□□□ -0.34
PKP3-208ENST00000531857 PI3P19957 117 aa12.95□□□□□ -0.34
PKP3-208ENST00000531857 GNRHRP30968 328 aa12.95□□□□□ -0.34
PKP3-208ENST00000531857 SLC16A13Q7RTY0 426 aa12.95□□□□□ -0.34
PKP3-208ENST00000531857 ZNF680Q8NEM1 530 aa12.95□□□□□ -0.34
PKP3-208ENST00000531857 OSR1Q8TAX0 266 aaPredicted RBP12.95□□□□□ -0.34
PKP3-208ENST00000531857 ADTRPQ96IZ2 230 aa12.95□□□□□ -0.34
PKP3-208ENST00000531857 ARL6Q9H0F7 186 aa12.95□□□□□ -0.34
PKP3-208ENST00000531857 TMEM222Q9H0R3 208 aa12.95□□□□□ -0.34
PKP3-208ENST00000531857 MLXQ9UH92 298 aa12.95□□□□□ -0.34
PKP3-208ENST00000531857 S4R3C0 116 aa12.95□□□□□ -0.34
PKP3-208ENST00000531857 CXorf65A6NEN9 183 aa12.94□□□□□ -0.34
PKP3-208ENST00000531857 TAAR5O14804 337 aa12.94□□□□□ -0.34
PKP3-208ENST00000531857 ACTL6BO94805 426 aa12.94□□□□□ -0.34
PKP3-208ENST00000531857 ATG12O94817 140 aa12.94□□□□□ -0.34
PKP3-208ENST00000531857 CXCL2P19875 107 aa12.94□□□□□ -0.34
PKP3-208ENST00000531857 IL15RAQ13261 267 aa12.94□□□□□ -0.34
PKP3-208ENST00000531857 MMD2Q8IY49 270 aa12.94□□□□□ -0.34
PKP3-208ENST00000531857 PHYHIPLQ96FC7 376 aa12.94□□□□□ -0.34
PKP3-208ENST00000531857 SEC22AQ96IW7 307 aa12.94□□□□□ -0.34
PKP3-208ENST00000531857 CCDC140Q96MF4 163 aa12.94□□□□□ -0.34
PKP3-208ENST00000531857 GGTLC1Q9BX51 225 aa12.94□□□□□ -0.34
PKP3-208ENST00000531857 FBXL7Q9UJT9 491 aa12.94□□□□□ -0.34
PKP3-208ENST00000531857 TRAV14DV4A0A0A6YYC5 116 aa12.93□□□□□ -0.34
PKP3-208ENST00000531857 A0A0J9YWU9 116 aa12.93□□□□□ -0.34
PKP3-208ENST00000531857 TMEM213A2RRL7 107 aa12.93□□□□□ -0.34
PKP3-208ENST00000531857 TSC22D2O75157 780 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms