RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 OVOL2Q9BRP0 275 aa16.61■□□□□ 0.25
TRAPPC4-210ENST00000531290 COPZ2Q9P299 210 aa16.61■□□□□ 0.25
TRAPPC4-210ENST00000531290 IGHV3OR16-8A0A075B7F1 116 aa16.6■□□□□ 0.25
TRAPPC4-210ENST00000531290 NUPL2O15504 423 aaKnown RBP16.6■□□□□ 0.25
TRAPPC4-210ENST00000531290 GSTZ1O43708 216 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC4-210ENST00000531290 ADMP35318 185 aa16.6■□□□□ 0.25
TRAPPC4-210ENST00000531290 APOC4P55056 127 aa16.6■□□□□ 0.25
TRAPPC4-210ENST00000531290 PIGPP57054 158 aa16.6■□□□□ 0.25
TRAPPC4-210ENST00000531290 OR4D10Q8NGI6 311 aa16.6■□□□□ 0.25
TRAPPC4-210ENST00000531290 MISP3Q96FF7 219 aa16.6■□□□□ 0.25
TRAPPC4-210ENST00000531290 SEC22AQ96IW7 307 aa16.6■□□□□ 0.25
TRAPPC4-210ENST00000531290 UBQLN2Q9UHD9 624 aa16.6■□□□□ 0.25
TRAPPC4-210ENST00000531290 LYSTQ99698 3801 aa16.59■□□□□ 0.25
TRAPPC4-210ENST00000531290 OR4C46A6NHA9 309 aa16.59■□□□□ 0.25
TRAPPC4-210ENST00000531290 C15orf62A8K5M9 175 aa16.59■□□□□ 0.25
TRAPPC4-210ENST00000531290 F8W735 103 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC4-210ENST00000531290 ZNF207O43670 478 aaKnown RBP16.59■□□□□ 0.25
TRAPPC4-210ENST00000531290 ATG12O94817 140 aa16.59■□□□□ 0.25
TRAPPC4-210ENST00000531290 CTSGP08311 255 aa16.59■□□□□ 0.25
TRAPPC4-210ENST00000531290 PI3P19957 117 aa16.59■□□□□ 0.25
TRAPPC4-210ENST00000531290 RND3P61587 244 aa16.59■□□□□ 0.25
TRAPPC4-210ENST00000531290 RELQ04864 619 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC4-210ENST00000531290 PRRT1Q99946 306 aa16.59■□□□□ 0.25
TRAPPC4-210ENST00000531290 RBM38Q9H0Z9 239 aaKnown RBP16.59■□□□□ 0.25
TRAPPC4-210ENST00000531290 C14orf166Q9Y224 244 aaKnown RBP16.59■□□□□ 0.25
TRAPPC4-210ENST00000531290 YIF1AO95070 293 aa16.58■□□□□ 0.24
TRAPPC4-210ENST00000531290 MFAP4P55083 255 aa16.58■□□□□ 0.24
TRAPPC4-210ENST00000531290 PYDC2Q56P42 97 aa16.58■□□□□ 0.24
TRAPPC4-210ENST00000531290 MARCH1Q8TCQ1 289 aa16.58■□□□□ 0.24
TRAPPC4-210ENST00000531290 MRGPRFQ96AM1 343 aa16.58■□□□□ 0.24
TRAPPC4-210ENST00000531290 IGKV1-39P01597 117 aa16.57■□□□□ 0.24
TRAPPC4-210ENST00000531290 IGKV1D-39P04432 117 aa16.57■□□□□ 0.24
TRAPPC4-210ENST00000531290 HSPE1P61604 102 aaKnown RBP16.57■□□□□ 0.24
TRAPPC4-210ENST00000531290 ERHP84090 104 aaKnown RBP16.57■□□□□ 0.24
TRAPPC4-210ENST00000531290 PRCDQ00LT1 54 aa16.57■□□□□ 0.24
TRAPPC4-210ENST00000531290 OR13C8Q8NGS7 320 aa16.57■□□□□ 0.24
TRAPPC4-210ENST00000531290 TXN2Q99757 166 aa16.57■□□□□ 0.24
TRAPPC4-210ENST00000531290 SMPXQ9UHP9 88 aa16.57■□□□□ 0.24
TRAPPC4-210ENST00000531290 SCP2D1Q9UJQ7 156 aa16.57■□□□□ 0.24
TRAPPC4-210ENST00000531290 C3orf85A0A1B0GTC6 90 aa16.56■□□□□ 0.24
TRAPPC4-210ENST00000531290 ANKRD20A5PA0PJZ0 165 aa16.56■□□□□ 0.24
TRAPPC4-210ENST00000531290 I3L2K1 104 aa16.56■□□□□ 0.24
TRAPPC4-210ENST00000531290 UBE2CO00762 179 aa16.56■□□□□ 0.24
TRAPPC4-210ENST00000531290 B3GALNT1O75752 331 aa16.56■□□□□ 0.24
TRAPPC4-210ENST00000531290 CTSDP07339 412 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC4-210ENST00000531290 SURF2Q15527 256 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC4-210ENST00000531290 FAAP20Q6NZ36 180 aa16.56■□□□□ 0.24
TRAPPC4-210ENST00000531290 Q6ZWC4 215 aa16.56■□□□□ 0.24
TRAPPC4-210ENST00000531290 OR4C16Q8NGL9 310 aa16.56■□□□□ 0.24
TRAPPC4-210ENST00000531290 SCGB3A2Q96PL1 93 aa16.56■□□□□ 0.24
TRAPPC4-210ENST00000531290 SOSTQ9BQB4 213 aa16.56■□□□□ 0.24
TRAPPC4-210ENST00000531290 MCUBQ9NWR8 336 aa16.56■□□□□ 0.24
TRAPPC4-210ENST00000531290 NDUFA13Q9P0J0 144 aa16.56■□□□□ 0.24
TRAPPC4-210ENST00000531290 SPRY2O43597 315 aa16.55■□□□□ 0.24
TRAPPC4-210ENST00000531290 MT-CO2P00403 227 aa16.55■□□□□ 0.24
TRAPPC4-210ENST00000531290 FCGR2BP31994 310 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC4-210ENST00000531290 FAUP35544 74 aaKnown RBP16.55■□□□□ 0.24
TRAPPC4-210ENST00000531290 AP3S2P59780 193 aa16.55■□□□□ 0.24
TRAPPC4-210ENST00000531290 TRIM16LQ309B1 348 aa16.55■□□□□ 0.24
TRAPPC4-210ENST00000531290 STPG3Q8N7X2 389 aa16.55■□□□□ 0.24
TRAPPC4-210ENST00000531290 ZNF114Q8NC26 417 aa16.55■□□□□ 0.24
TRAPPC4-210ENST00000531290 PINX1Q96BK5 328 aaKnown RBP16.55■□□□□ 0.24
TRAPPC4-210ENST00000531290 RHPN1-AS1Q9BWJ2 59 aa16.55■□□□□ 0.24
TRAPPC4-210ENST00000531290 TP53TG1Q9Y2A0 90 aa16.55■□□□□ 0.24
TRAPPC4-210ENST00000531290 IGHV7-4-1A0A0J9YVY3 117 aa16.54■□□□□ 0.24
TRAPPC4-210ENST00000531290 TEX13DA0A0J9YY54 714 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC4-210ENST00000531290 BMI1P35226 326 aa16.54■□□□□ 0.24
TRAPPC4-210ENST00000531290 ODF3L2Q3SX64 289 aa16.54■□□□□ 0.24
TRAPPC4-210ENST00000531290 SPANXN2Q5MJ10 180 aa16.54■□□□□ 0.24
TRAPPC4-210ENST00000531290 TMEM116Q8NCL8 245 aa16.54■□□□□ 0.24
TRAPPC4-210ENST00000531290 OR51S1Q8NGJ8 323 aa16.54■□□□□ 0.24
TRAPPC4-210ENST00000531290 TRAV14DV4A0A0A6YYC5 116 aa16.53■□□□□ 0.24
TRAPPC4-210ENST00000531290 KIR2DL5BA0A0G2JN68 375 aa16.53■□□□□ 0.24
TRAPPC4-210ENST00000531290 KIR2DL5BA0A0G2JPC4 375 aa16.53■□□□□ 0.24
TRAPPC4-210ENST00000531290 GNG7O60262 68 aa16.53■□□□□ 0.24
TRAPPC4-210ENST00000531290 IGHV3-48P01763 117 aa16.53■□□□□ 0.24
TRAPPC4-210ENST00000531290 AKR1C2P52895 323 aa16.53■□□□□ 0.24
TRAPPC4-210ENST00000531290 KIR2DL5AQ8N109 375 aa16.53■□□□□ 0.24
TRAPPC4-210ENST00000531290 KIR2DL5BQ8NHK3 375 aa16.53■□□□□ 0.24
TRAPPC4-210ENST00000531290 RNASE11Q8TAA1 199 aaKnown RBP16.53■□□□□ 0.24
TRAPPC4-210ENST00000531290 RNF2Q99496 336 aa16.53■□□□□ 0.24
TRAPPC4-210ENST00000531290 PLECQ15149 4684 aaKnown RBP16.53■□□□□ 0.24
TRAPPC4-210ENST00000531290 CHEK1O14757 476 aa16.52■□□□□ 0.24
TRAPPC4-210ENST00000531290 RPL35AP18077 110 aaKnown RBP16.52■□□□□ 0.24
TRAPPC4-210ENST00000531290 SNCAP37840 140 aa16.52■□□□□ 0.24
TRAPPC4-210ENST00000531290 CMC4P56277 68 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC4-210ENST00000531290 DEFB135Q30KP9 77 aa16.52■□□□□ 0.24
TRAPPC4-210ENST00000531290 WFDC3Q8IUB2 231 aa16.52■□□□□ 0.24
TRAPPC4-210ENST00000531290 TOMM5Q8N4H5 51 aa16.52■□□□□ 0.24
TRAPPC4-210ENST00000531290 RRNAD1Q96FB5 475 aaKnown RBP16.52■□□□□ 0.24
TRAPPC4-210ENST00000531290 GALNT14Q96FL9 552 aa16.52■□□□□ 0.24
TRAPPC4-210ENST00000531290 OR10C1Q96KK4 312 aa16.52■□□□□ 0.24
TRAPPC4-210ENST00000531290 TP53RKQ96S44 253 aa16.52■□□□□ 0.24
TRAPPC4-210ENST00000531290 IGHV3-49A0A0A0MS15 119 aa16.51■□□□□ 0.23
TRAPPC4-210ENST00000531290 A0A0J9YWU9 116 aa16.51■□□□□ 0.23
TRAPPC4-210ENST00000531290 CXorf65A6NEN9 183 aa16.51■□□□□ 0.23
TRAPPC4-210ENST00000531290 IFNA17P01571 189 aa16.51■□□□□ 0.23
TRAPPC4-210ENST00000531290 NPBWR1P48145 328 aa16.51■□□□□ 0.23
TRAPPC4-210ENST00000531290 IZUMO4Q1ZYL8 232 aa16.51■□□□□ 0.23
TRAPPC4-210ENST00000531290 SP6Q3SY56 376 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms