RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 PCDH15Q96QU1 1955 aa6.4□□□□□ -1.39
PTPRK-219ENST00000531050 KMT2EQ8IZD2 1858 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 B9A039 149 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 TNFSF11O14788 317 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 P0C879 139 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 ZNF138P52744 262 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 TAS2R45P59539 299 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 GNG3P63215 75 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 GAGE13Q4V321 117 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 PPP1R32Q7Z5V6 425 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 ANKRD37Q7Z713 158 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 COL25A1Q9BXS0 654 aaPredicted RBP6.39□□□□□ -1.39
PTPRK-219ENST00000531050 PLA2G2FQ9BZM2 168 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 A0A1W2PQD3 144 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 GAGE12JA6NER3 117 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 PRSS29PA6NIE9 313 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 C15orf62A8K5M9 175 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 FABP5P3A8MUU1 101 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 GAGE7O76087 117 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 APOMO95445 188 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 GAGE12FP0CL80 117 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 GAGE12GP0CL81 117 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 GAGE12IP0CL82 117 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 CT45A6P0DMU7 189 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 CT45A5P0DMU8 189 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 CT45A7P0DMV0 189 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 TCTAP57738 103 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 GAGE4Q13068 117 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 DIAPH2-AS1Q14236 149 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 ANXA2RQ3ZCQ2 193 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 CT45A1Q5HYN5 189 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 AMTNQ6UX39 209 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 FAM214BQ7L5A3 538 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 PCP2Q8IVA1 136 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 CT45A3Q8NHU0 189 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 Q8TCH9 128 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 PLPPR2Q96GM1 343 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 MGST2Q99735 147 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 ZNF747Q9BV97 191 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 TMEM133Q9H2Q1 129 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 C12orf49Q9H741 205 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 ZNF355PQ9NSJ1 428 aa6.39□□□□□ -1.39
PTPRK-219ENST00000531050 LAMA3Q16787 3333 aa6.38□□□□□ -1.39
PTPRK-219ENST00000531050 A0A1W2PQU0 124 aa6.38□□□□□ -1.39
PTPRK-219ENST00000531050 FRG2CA6NGY1 282 aa6.38□□□□□ -1.39
PTPRK-219ENST00000531050 C2CD4DB7Z1M9 353 aa6.38□□□□□ -1.39
PTPRK-219ENST00000531050 IGLL5B9A064 214 aa6.38□□□□□ -1.39
PTPRK-219ENST00000531050 C16orf97H3BN30 126 aa6.38□□□□□ -1.39
PTPRK-219ENST00000531050 GCSHP23434 173 aa6.38□□□□□ -1.39
PTPRK-219ENST00000531050 PPIFP30405 207 aaKnown RBP6.38□□□□□ -1.39
PTPRK-219ENST00000531050 C3AR1Q16581 482 aa6.38□□□□□ -1.39
PTPRK-219ENST00000531050 BCL6BQ8N143 479 aaPredicted RBP6.38□□□□□ -1.39
PTPRK-219ENST00000531050 GLMPQ8WWB7 406 aa6.38□□□□□ -1.39
PTPRK-219ENST00000531050 PRELID3AQ96N28 172 aa6.38□□□□□ -1.39
PTPRK-219ENST00000531050 POLDIP2Q9Y2S7 368 aa6.38□□□□□ -1.39
PTPRK-219ENST00000531050 F11RQ9Y624 299 aaKnown RBP6.38□□□□□ -1.39
PTPRK-219ENST00000531050 A0A1B0GWB2 263 aa6.38□□□□□ -1.39
PTPRK-219ENST00000531050 BCL3P20749 454 aa6.38□□□□□ -1.39
PTPRK-219ENST00000531050 RPS21P63220 83 aaKnown RBP6.38□□□□□ -1.39
PTPRK-219ENST00000531050 PLP2Q04941 152 aa6.38□□□□□ -1.39
PTPRK-219ENST00000531050 PSG5Q15238 335 aa6.38□□□□□ -1.39
PTPRK-219ENST00000531050 SPINK9Q5DT21 86 aa6.38□□□□□ -1.39
PTPRK-219ENST00000531050 TMEM42Q69YG0 159 aa6.38□□□□□ -1.39
PTPRK-219ENST00000531050 ZFAND6Q6FIF0 208 aa6.38□□□□□ -1.39
PTPRK-219ENST00000531050 C20orf204Q6ZNR8 217 aa6.38□□□□□ -1.39
PTPRK-219ENST00000531050 NFE4Q86UQ8 179 aa6.38□□□□□ -1.39
PTPRK-219ENST00000531050 SFTPA2Q8IWL1 248 aa6.38□□□□□ -1.39
PTPRK-219ENST00000531050 ZADH2Q8N4Q0 377 aa6.38□□□□□ -1.39
PTPRK-219ENST00000531050 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.38□□□□□ -1.39
PTPRK-219ENST00000531050 HS3ST6Q96QI5 342 aa6.38□□□□□ -1.39
PTPRK-219ENST00000531050 TMUB1Q9BVT8 246 aa6.38□□□□□ -1.39
PTPRK-219ENST00000531050 LIN7CQ9NUP9 197 aaKnown RBP6.38□□□□□ -1.39
PTPRK-219ENST00000531050 CHD9Q3L8U1 2897 aa6.37□□□□□ -1.39
PTPRK-219ENST00000531050 C3orf80F5H4A9 247 aa6.37□□□□□ -1.39
PTPRK-219ENST00000531050 M0R135 149 aa6.37□□□□□ -1.39
PTPRK-219ENST00000531050 HSPB6O14558 160 aa6.37□□□□□ -1.39
PTPRK-219ENST00000531050 MGST3O14880 152 aa6.37□□□□□ -1.39
PTPRK-219ENST00000531050 MPDU1O75352 247 aa6.37□□□□□ -1.39
PTPRK-219ENST00000531050 WISP2O76076 250 aa6.37□□□□□ -1.39
PTPRK-219ENST00000531050 TREML4Q6UXN2 200 aa6.37□□□□□ -1.39
PTPRK-219ENST00000531050 ATP5L2Q7Z4Y8 100 aa6.37□□□□□ -1.39
PTPRK-219ENST00000531050 YRDCQ86U90 279 aaKnown RBP6.37□□□□□ -1.39
PTPRK-219ENST00000531050 TMEM178AQ8NBL3 297 aa6.37□□□□□ -1.39
PTPRK-219ENST00000531050 ATP6V0E2Q8NHE4 81 aa6.37□□□□□ -1.39
PTPRK-219ENST00000531050 SNRNP40Q96DI7 357 aaKnown RBP6.37□□□□□ -1.39
PTPRK-219ENST00000531050 ZNF799Q96GE5 643 aa6.37□□□□□ -1.39
PTPRK-219ENST00000531050 PKIBQ9C010 78 aa6.37□□□□□ -1.39
PTPRK-219ENST00000531050 DUSP13Q9UII6 198 aa6.37□□□□□ -1.39
PTPRK-219ENST00000531050 KIAA0100Q14667 2235 aaKnown RBP6.37□□□□□ -1.39
PTPRK-219ENST00000531050 TEX50A0A1B0GTY4 177 aa6.37□□□□□ -1.39
PTPRK-219ENST00000531050 PRSS38A1L453 326 aa6.37□□□□□ -1.39
PTPRK-219ENST00000531050 HIGD1CA8MV81 97 aa6.37□□□□□ -1.39
PTPRK-219ENST00000531050 A8MWL6 223 aa6.37□□□□□ -1.39
PTPRK-219ENST00000531050 GGTLC3B5MD39 225 aa6.37□□□□□ -1.39
PTPRK-219ENST00000531050 FNDC10F2Z333 226 aa6.37□□□□□ -1.39
PTPRK-219ENST00000531050 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.37□□□□□ -1.39
PTPRK-219ENST00000531050 ZIC3O60481 467 aa6.37□□□□□ -1.39
PTPRK-219ENST00000531050 THBDP07204 575 aa6.37□□□□□ -1.39
PTPRK-219ENST00000531050 CELA2BP08218 269 aaPredicted RBP6.37□□□□□ -1.39
PTPRK-219ENST00000531050 G6PCP35575 357 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms