RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 C15orf32Q32M92 178 aa13.13□□□□□ -0.31
SF3B2-211ENST00000531041 C4orf3Q8WVX3 66 aa13.13□□□□□ -0.31
SF3B2-211ENST00000531041 SMIM8Q96KF7 97 aa13.13□□□□□ -0.31
SF3B2-211ENST00000531041 GNB4Q9HAV0 340 aa13.13□□□□□ -0.31
SF3B2-211ENST00000531041 PAX9P55771 341 aa13.12□□□□□ -0.31
SF3B2-211ENST00000531041 TAS2R30P59541 319 aa13.12□□□□□ -0.31
SF3B2-211ENST00000531041 RUNX1Q01196 453 aa13.12□□□□□ -0.31
SF3B2-211ENST00000531041 RAB32Q13637 225 aa13.12□□□□□ -0.31
SF3B2-211ENST00000531041 NSUN5P1Q3KNT7 163 aa13.12□□□□□ -0.31
SF3B2-211ENST00000531041 C18orf65Q6ZTR6 163 aa13.12□□□□□ -0.31
SF3B2-211ENST00000531041 KLHL30-AS1Q8NEE0 82 aa13.12□□□□□ -0.31
SF3B2-211ENST00000531041 TMEM170AQ8WVE7 144 aa13.12□□□□□ -0.31
SF3B2-211ENST00000531041 MISP3Q96FF7 219 aa13.12□□□□□ -0.31
SF3B2-211ENST00000531041 CXorf58Q96LI9 332 aa13.12□□□□□ -0.31
SF3B2-211ENST00000531041 LSM5Q9Y4Y9 91 aaKnown RBP13.12□□□□□ -0.31
SF3B2-211ENST00000531041 A0A1W2PRX2 142 aa13.11□□□□□ -0.31
SF3B2-211ENST00000531041 I3L521 148 aa13.11□□□□□ -0.31
SF3B2-211ENST00000531041 K7EIM0 57 aa13.11□□□□□ -0.31
SF3B2-211ENST00000531041 TMEM50AO95807 157 aa13.11□□□□□ -0.31
SF3B2-211ENST00000531041 RPP30P78346 268 aaKnown RBP13.11□□□□□ -0.31
SF3B2-211ENST00000531041 EXOSC2Q13868 293 aaKnown RBP13.11□□□□□ -0.31
SF3B2-211ENST00000531041 ZNF343Q6P1L6 599 aa13.11□□□□□ -0.31
SF3B2-211ENST00000531041 RNASEH2CQ8TDP1 164 aaKnown RBP13.11□□□□□ -0.31
SF3B2-211ENST00000531041 VN1R17PQ8TDU5 208 aa13.11□□□□□ -0.31
SF3B2-211ENST00000531041 WDR89Q96FK6 387 aaPredicted RBP13.11□□□□□ -0.31
SF3B2-211ENST00000531041 C15orf62A8K5M9 175 aa13.1□□□□□ -0.31
SF3B2-211ENST00000531041 NUDT19A8MXV4 375 aa13.1□□□□□ -0.31
SF3B2-211ENST00000531041 I3L2K1 104 aa13.1□□□□□ -0.31
SF3B2-211ENST00000531041 IGHV3-11P01762 117 aa13.1□□□□□ -0.31
SF3B2-211ENST00000531041 LGALS1P09382 135 aaKnown RBP13.1□□□□□ -0.31
SF3B2-211ENST00000531041 S100A10P60903 97 aa13.1□□□□□ -0.31
SF3B2-211ENST00000531041 PPP1R1CQ8WVI7 109 aa13.1□□□□□ -0.31
SF3B2-211ENST00000531041 ASB13Q8WXK3 278 aa13.1□□□□□ -0.31
SF3B2-211ENST00000531041 C11orf1Q9H5F2 150 aa13.1□□□□□ -0.31
SF3B2-211ENST00000531041 PSENENQ9NZ42 101 aa13.1□□□□□ -0.31
SF3B2-211ENST00000531041 WNK1Q9H4A3 2382 aa13.1□□□□□ -0.31
SF3B2-211ENST00000531041 TRBV7-1A0A0A6YYK4 115 aa13.09□□□□□ -0.31
SF3B2-211ENST00000531041 MFSD2BA6NFX1 497 aa13.09□□□□□ -0.31
SF3B2-211ENST00000531041 TSC22D2O75157 780 aa13.09□□□□□ -0.31
SF3B2-211ENST00000531041 PVALBP20472 110 aaPredicted RBP13.09□□□□□ -0.31
SF3B2-211ENST00000531041 RAB11AP62491 216 aa13.09□□□□□ -0.31
SF3B2-211ENST00000531041 FAM209BQ5JX69 171 aa13.09□□□□□ -0.31
SF3B2-211ENST00000531041 SPANXN5Q5MJ07 72 aa13.09□□□□□ -0.31
SF3B2-211ENST00000531041 C8orf86Q6ZUL3 223 aa13.09□□□□□ -0.31
SF3B2-211ENST00000531041 SCARB1Q8WTV0 552 aa13.09□□□□□ -0.31
SF3B2-211ENST00000531041 EEF1AKMT3Q96AZ1 226 aa13.09□□□□□ -0.31
SF3B2-211ENST00000531041 PINX1Q96BK5 328 aaKnown RBP13.09□□□□□ -0.31
SF3B2-211ENST00000531041 OR5B12Q96R08 314 aa13.09□□□□□ -0.31
SF3B2-211ENST00000531041 OR4C12Q96R67 309 aa13.09□□□□□ -0.31
SF3B2-211ENST00000531041 ZNF436Q9C0F3 470 aaPredicted RBP13.09□□□□□ -0.31
SF3B2-211ENST00000531041 STRAPQ9Y3F4 350 aaKnown RBP13.09□□□□□ -0.31
SF3B2-211ENST00000531041 H3BP45 60 aa13.08□□□□□ -0.32
SF3B2-211ENST00000531041 L7N2F9 121 aa13.08□□□□□ -0.32
SF3B2-211ENST00000531041 DEDDO75618 318 aa13.08□□□□□ -0.32
SF3B2-211ENST00000531041 MT-CO2P00403 227 aa13.08□□□□□ -0.32
SF3B2-211ENST00000531041 RLN2P04090 185 aa13.08□□□□□ -0.32
SF3B2-211ENST00000531041 VAMP2P63027 116 aa13.08□□□□□ -0.32
SF3B2-211ENST00000531041 LRRC37A5PQ49AS3 106 aa13.08□□□□□ -0.32
SF3B2-211ENST00000531041 ZNF502Q8TBZ5 544 aa13.08□□□□□ -0.32
SF3B2-211ENST00000531041 ATP6V0BQ99437 205 aa13.08□□□□□ -0.32
SF3B2-211ENST00000531041 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.07□□□□□ -0.32
SF3B2-211ENST00000531041 MPC2O95563 127 aa13.07□□□□□ -0.32
SF3B2-211ENST00000531041 IFNA4P05014 189 aa13.07□□□□□ -0.32
SF3B2-211ENST00000531041 GIPP09681 153 aaPredicted RBP13.07□□□□□ -0.32
SF3B2-211ENST00000531041 OR8U8P0C7N1 319 aa13.07□□□□□ -0.32
SF3B2-211ENST00000531041 OPRK1P41145 380 aa13.07□□□□□ -0.32
SF3B2-211ENST00000531041 OR4F17Q8NGA8 305 aa13.07□□□□□ -0.32
SF3B2-211ENST00000531041 CCDC140Q96MF4 163 aa13.07□□□□□ -0.32
SF3B2-211ENST00000531041 OR4F4Q96R69 305 aa13.07□□□□□ -0.32
SF3B2-211ENST00000531041 FNDC4Q9H6D8 234 aaPredicted RBP13.07□□□□□ -0.32
SF3B2-211ENST00000531041 C21orf62Q9NYP8 219 aa13.07□□□□□ -0.32
SF3B2-211ENST00000531041 PEF1Q9UBV8 284 aaKnown RBP13.07□□□□□ -0.32
SF3B2-211ENST00000531041 S4R3C0 116 aa13.07□□□□□ -0.32
SF3B2-211ENST00000531041 IGHV3-21A0A0B4J1V1 117 aa13.06□□□□□ -0.32
SF3B2-211ENST00000531041 RPS10-NUDT3A0A1W2PQS6 291 aa13.06□□□□□ -0.32
SF3B2-211ENST00000531041 M0QZ24 198 aa13.06□□□□□ -0.32
SF3B2-211ENST00000531041 HSPB1P04792 205 aaKnown RBP13.06□□□□□ -0.32
SF3B2-211ENST00000531041 PET100P0DJ07 73 aa13.06□□□□□ -0.32
SF3B2-211ENST00000531041 FCGR2BP31994 310 aaPredicted RBP13.06□□□□□ -0.32
SF3B2-211ENST00000531041 MFAP4P55083 255 aa13.06□□□□□ -0.32
SF3B2-211ENST00000531041 DEFB136Q30KP8 78 aa13.06□□□□□ -0.32
SF3B2-211ENST00000531041 TMEM14EPQ6UXP3 125 aa13.06□□□□□ -0.32
SF3B2-211ENST00000531041 ETV3LQ6ZN32 361 aa13.06□□□□□ -0.32
SF3B2-211ENST00000531041 RAX2Q96IS3 184 aa13.06□□□□□ -0.32
SF3B2-211ENST00000531041 TXN2Q99757 166 aa13.06□□□□□ -0.32
SF3B2-211ENST00000531041 RANGRFQ9HD47 186 aaPredicted RBP13.06□□□□□ -0.32
SF3B2-211ENST00000531041 ANKRD34BA5PLL1 514 aa13.05□□□□□ -0.32
SF3B2-211ENST00000531041 E5RGE8 158 aa13.05□□□□□ -0.32
SF3B2-211ENST00000531041 H0YIZ8 118 aa13.05□□□□□ -0.32
SF3B2-211ENST00000531041 CCL24O00175 119 aa13.05□□□□□ -0.32
SF3B2-211ENST00000531041 IGHV3-23P01764 117 aa13.05□□□□□ -0.32
SF3B2-211ENST00000531041 RAP2BP61225 183 aa13.05□□□□□ -0.32
SF3B2-211ENST00000531041 CD69Q07108 199 aa13.05□□□□□ -0.32
SF3B2-211ENST00000531041 MLANAQ16655 118 aa13.05□□□□□ -0.32
SF3B2-211ENST00000531041 ETFRF1Q6IPR1 90 aa13.05□□□□□ -0.32
SF3B2-211ENST00000531041 CLEC19AQ6UXS0 136 aa13.05□□□□□ -0.32
SF3B2-211ENST00000531041 OR11H1Q8NG94 326 aa13.05□□□□□ -0.32
SF3B2-211ENST00000531041 RNF126Q9BV68 326 aa13.05□□□□□ -0.32
SF3B2-211ENST00000531041 OR5AC2Q9NZP5 309 aa13.05□□□□□ -0.32
SF3B2-211ENST00000531041 PAIP2BQ9ULR5 123 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms