RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.43■□□□□ 0.22
CAPN1-220ENST00000530567 ANKRD34BA5PLL1 514 aa16.43■□□□□ 0.22
CAPN1-220ENST00000530567 I3L2K1 104 aa16.43■□□□□ 0.22
CAPN1-220ENST00000530567 IGHV3-23P01764 117 aa16.43■□□□□ 0.22
CAPN1-220ENST00000530567 PF4P02776 101 aa16.43■□□□□ 0.22
CAPN1-220ENST00000530567 ZNF616Q08AN1 781 aa16.43■□□□□ 0.22
CAPN1-220ENST00000530567 LINC00482Q8N8I6 264 aa16.43■□□□□ 0.22
CAPN1-220ENST00000530567 SLC24A4Q8NFF2 622 aa16.43■□□□□ 0.22
CAPN1-220ENST00000530567 ALG5Q9Y673 324 aa16.43■□□□□ 0.22
CAPN1-220ENST00000530567 SYNGR2O43760 224 aa16.42■□□□□ 0.22
CAPN1-220ENST00000530567 HSPB1P04792 205 aaKnown RBP16.42■□□□□ 0.22
CAPN1-220ENST00000530567 IAPPP10997 89 aa16.42■□□□□ 0.22
CAPN1-220ENST00000530567 HTR2BP41595 481 aa16.42■□□□□ 0.22
CAPN1-220ENST00000530567 NKX2-1P43699 371 aaPredicted RBP16.42■□□□□ 0.22
CAPN1-220ENST00000530567 POLR2GP62487 172 aaKnown RBP eCLIP16.42■□□□□ 0.22
CAPN1-220ENST00000530567 C2orf83Q53S99 150 aa16.42■□□□□ 0.22
CAPN1-220ENST00000530567 TREML4Q6UXN2 200 aa16.42■□□□□ 0.22
CAPN1-220ENST00000530567 ZNF502Q8TBZ5 544 aa16.42■□□□□ 0.22
CAPN1-220ENST00000530567 VN1R17PQ8TDU5 208 aa16.42■□□□□ 0.22
CAPN1-220ENST00000530567 EEF1AKMT3Q96AZ1 226 aa16.42■□□□□ 0.22
CAPN1-220ENST00000530567 MISP3Q96FF7 219 aa16.42■□□□□ 0.22
CAPN1-220ENST00000530567 CXorf58Q96LI9 332 aa16.42■□□□□ 0.22
CAPN1-220ENST00000530567 HIPK2Q9H2X6 1198 aa16.42■□□□□ 0.22
CAPN1-220ENST00000530567 IGHV3-21A0A0B4J1V1 117 aa16.41■□□□□ 0.22
CAPN1-220ENST00000530567 FAM25EA8MYX2 175 aa16.41■□□□□ 0.22
CAPN1-220ENST00000530567 MED6O75586 246 aa16.41■□□□□ 0.22
CAPN1-220ENST00000530567 SCARB1Q8WTV0 552 aa16.41■□□□□ 0.22
CAPN1-220ENST00000530567 GSKIPQ9P0R6 139 aa16.41■□□□□ 0.22
CAPN1-220ENST00000530567 PEF1Q9UBV8 284 aaKnown RBP16.41■□□□□ 0.22
CAPN1-220ENST00000530567 MGAM2Q2M2H8 2515 aa16.4■□□□□ 0.22
CAPN1-220ENST00000530567 C5orf51A6NDU8 294 aa16.4■□□□□ 0.22
CAPN1-220ENST00000530567 F8W735 103 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-220ENST00000530567 LINC01619G3V211 115 aa16.4■□□□□ 0.22
CAPN1-220ENST00000530567 MT-CO2P00403 227 aa16.4■□□□□ 0.22
CAPN1-220ENST00000530567 NPY1RP25929 384 aa16.4■□□□□ 0.22
CAPN1-220ENST00000530567 SUB1P53999 127 aaKnown RBP eCLIP16.4■□□□□ 0.226e-7■□□□□ 8.8
CAPN1-220ENST00000530567 IL15RAQ13261 267 aa16.4■□□□□ 0.22
CAPN1-220ENST00000530567 GSG1LQ6UXU4 331 aa16.4■□□□□ 0.22
CAPN1-220ENST00000530567 C2orf50Q96LR7 162 aa16.4■□□□□ 0.22
CAPN1-220ENST00000530567 RANGRFQ9HD47 186 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-220ENST00000530567 TRBV7-1A0A0A6YYK4 115 aa16.39■□□□□ 0.21
CAPN1-220ENST00000530567 BMPR1BO00238 502 aa16.39■□□□□ 0.21
CAPN1-220ENST00000530567 GOSR2O14653 212 aa16.39■□□□□ 0.21
CAPN1-220ENST00000530567 MBPP02686 304 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-220ENST00000530567 SLURP1P55000 103 aa16.39■□□□□ 0.21
CAPN1-220ENST00000530567 CLEC19AQ6UXS0 136 aa16.39■□□□□ 0.21
CAPN1-220ENST00000530567 WFDC9Q8NEX5 89 aa16.39■□□□□ 0.21
CAPN1-220ENST00000530567 FNDC4Q9H6D8 234 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-220ENST00000530567 RCL1Q9Y2P8 373 aaKnown RBP16.39■□□□□ 0.21
CAPN1-220ENST00000530567 U3KQ87 197 aa16.39■□□□□ 0.21
CAPN1-220ENST00000530567 C15orf62A8K5M9 175 aa16.38■□□□□ 0.21
CAPN1-220ENST00000530567 SIX6O95475 246 aa16.38■□□□□ 0.21
CAPN1-220ENST00000530567 TMEM50AO95807 157 aa16.38■□□□□ 0.21
CAPN1-220ENST00000530567 SCGB1D2O95969 90 aa16.38■□□□□ 0.21
CAPN1-220ENST00000530567 OR8U8P0C7N1 319 aa16.38■□□□□ 0.21
CAPN1-220ENST00000530567 DPF1Q92782 380 aa16.38■□□□□ 0.21
CAPN1-220ENST00000530567 PINX1Q96BK5 328 aaKnown RBP16.38■□□□□ 0.21
CAPN1-220ENST00000530567 C21orf62Q9NYP8 219 aa16.38■□□□□ 0.21
CAPN1-220ENST00000530567 PPP5D1E7EU14 171 aa16.37■□□□□ 0.21
CAPN1-220ENST00000530567 CORTO00230 105 aa16.37■□□□□ 0.21
CAPN1-220ENST00000530567 WRBO00258 174 aa16.37■□□□□ 0.21
CAPN1-220ENST00000530567 SSNA1O43805 119 aa16.37■□□□□ 0.21
CAPN1-220ENST00000530567 SSSCA1O60232 199 aa16.37■□□□□ 0.21
CAPN1-220ENST00000530567 IFNA10P01566 189 aa16.37■□□□□ 0.21
CAPN1-220ENST00000530567 IGHV3-48P01763 117 aa16.37■□□□□ 0.21
CAPN1-220ENST00000530567 HOXD3P31249 432 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-220ENST00000530567 FAM209BQ5JX69 171 aa16.37■□□□□ 0.21
CAPN1-220ENST00000530567 CIB3Q96Q77 187 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-220ENST00000530567 OR4C12Q96R67 309 aa16.37■□□□□ 0.21
CAPN1-220ENST00000530567 GPR183P32249 361 aa16.36■□□□□ 0.21
CAPN1-220ENST00000530567 PAX9P55771 341 aa16.36■□□□□ 0.21
CAPN1-220ENST00000530567 H2BFSP57053 126 aa16.36■□□□□ 0.21
CAPN1-220ENST00000530567 RNASEH2CQ8TDP1 164 aaKnown RBP16.36■□□□□ 0.21
CAPN1-220ENST00000530567 MRPL36Q9P0J6 103 aaKnown RBP16.36■□□□□ 0.21
CAPN1-220ENST00000530567 NOTCH3Q9UM47 2321 aa16.36■□□□□ 0.21
CAPN1-220ENST00000530567 CLEC3BP05452 202 aa16.36■□□□□ 0.21
CAPN1-220ENST00000530567 ZP3P21754 424 aa16.36■□□□□ 0.21
CAPN1-220ENST00000530567 FCGR2BP31994 310 aaPredicted RBP16.36■□□□□ 0.21
CAPN1-220ENST00000530567 ATP5IP56385 69 aaPredicted RBP16.36■□□□□ 0.21
CAPN1-220ENST00000530567 MLANAQ16655 118 aa16.36■□□□□ 0.21
CAPN1-220ENST00000530567 DCUN1D4Q92564 292 aa16.36■□□□□ 0.21
CAPN1-220ENST00000530567 DLX4Q92988 240 aaPredicted RBP16.36■□□□□ 0.21
CAPN1-220ENST00000530567 ATP6V0BQ99437 205 aa16.36■□□□□ 0.21
CAPN1-220ENST00000530567 H3BP45 60 aa16.35■□□□□ 0.21
CAPN1-220ENST00000530567 K7EPK0 472 aa16.35■□□□□ 0.21
CAPN1-220ENST00000530567 ARL3P36405 182 aa16.35■□□□□ 0.21
CAPN1-220ENST00000530567 OPRK1P41145 380 aa16.35■□□□□ 0.21
CAPN1-220ENST00000530567 WDR89Q96FK6 387 aaPredicted RBP16.35■□□□□ 0.21
CAPN1-220ENST00000530567 C11orf1Q9H5F2 150 aa16.35■□□□□ 0.21
CAPN1-220ENST00000530567 MGAT4CQ9UBM8 478 aa16.35■□□□□ 0.21
CAPN1-220ENST00000530567 OR2T8A6NH00 312 aa16.34■□□□□ 0.21
CAPN1-220ENST00000530567 LY86O95711 162 aa16.34■□□□□ 0.21
CAPN1-220ENST00000530567 NOXA1Q86UR1 476 aa16.34■□□□□ 0.21
CAPN1-220ENST00000530567 ZNF414Q96IQ9 312 aa16.34■□□□□ 0.21
CAPN1-220ENST00000530567 SMIM8Q96KF7 97 aa16.34■□□□□ 0.21
CAPN1-220ENST00000530567 RAB40CQ96S21 281 aa16.34■□□□□ 0.21
CAPN1-220ENST00000530567 ZC4H2Q9NQZ6 224 aa16.34■□□□□ 0.21
CAPN1-220ENST00000530567 TGOLN2O43493 480 aa16.33■□□□□ 0.2
CAPN1-220ENST00000530567 GGCTO75223 188 aaKnown RBP16.33■□□□□ 0.2
CAPN1-220ENST00000530567 CD33P20138 364 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 296.6 ms