RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 LINC00312Q9Y6C7 94 aa15.82■□□□□ 0.12
PCF11-203ENST00000530304 TRBV9A0A0B4J1U6 114 aa15.82■□□□□ 0.12
PCF11-203ENST00000530304 C8orf88P0DMB2 117 aa15.82■□□□□ 0.12
PCF11-203ENST00000530304 CX3CL1P78423 397 aa15.82■□□□□ 0.12
PCF11-203ENST00000530304 CCL8P80075 99 aa15.82■□□□□ 0.12
PCF11-203ENST00000530304 Q0VG73 95 aa15.82■□□□□ 0.12
PCF11-203ENST00000530304 HSPB9Q9BQS6 159 aa15.82■□□□□ 0.12
PCF11-203ENST00000530304 SNHG12Q9BXW3 62 aa15.82■□□□□ 0.12
PCF11-203ENST00000530304 OSTCQ9NRP0 149 aa15.82■□□□□ 0.12
PCF11-203ENST00000530304 IGFL3Q6UXB1 125 aa15.81■□□□□ 0.12
PCF11-203ENST00000530304 OR2T6Q8NHC8 308 aa15.81■□□□□ 0.12
PCF11-203ENST00000530304 OSR1Q8TAX0 266 aaPredicted RBP15.81■□□□□ 0.12
PCF11-203ENST00000530304 HARBI1Q96MB7 349 aa15.81■□□□□ 0.12
PCF11-203ENST00000530304 NDUFA4L2Q9NRX3 87 aa15.81■□□□□ 0.12
PCF11-203ENST00000530304 TOMM20LQ6UXN7 152 aa15.81■□□□□ 0.12
PCF11-203ENST00000530304 COMMD5Q9GZQ3 224 aa15.81■□□□□ 0.12
PCF11-203ENST00000530304 A0A1W2PRE2 83 aa15.81■□□□□ 0.12
PCF11-203ENST00000530304 E7EUB6 86 aa15.81■□□□□ 0.12
PCF11-203ENST00000530304 IGLV2-8P01709 118 aa15.81■□□□□ 0.12
PCF11-203ENST00000530304 CHRNB4P30926 498 aa15.81■□□□□ 0.12
PCF11-203ENST00000530304 NUTF2P61970 127 aaKnown RBP15.81■□□□□ 0.12
PCF11-203ENST00000530304 SLC35B1P78383 322 aa15.81■□□□□ 0.12
PCF11-203ENST00000530304 PPOXP50336 477 aa15.8■□□□□ 0.12
PCF11-203ENST00000530304 TDRG1Q3Y452 100 aa15.8■□□□□ 0.12
PCF11-203ENST00000530304 TPTE2P1Q5T6R2 138 aa15.8■□□□□ 0.12
PCF11-203ENST00000530304 MORN5Q5VZ52 161 aa15.8■□□□□ 0.12
PCF11-203ENST00000530304 OR5AU1Q8NGC0 362 aa15.8■□□□□ 0.12
PCF11-203ENST00000530304 GAL3ST2Q9H3Q3 398 aa15.8■□□□□ 0.12
PCF11-203ENST00000530304 NAT8BQ9UHF3 227 aa15.8■□□□□ 0.12
PCF11-203ENST00000530304 TRAV5A0A0B4J249 113 aa15.8■□□□□ 0.12
PCF11-203ENST00000530304 H0YJW9 148 aa15.8■□□□□ 0.12
PCF11-203ENST00000530304 ISLRO14498 428 aa15.8■□□□□ 0.12
PCF11-203ENST00000530304 APOA2P02652 100 aa15.8■□□□□ 0.12
PCF11-203ENST00000530304 RPL8P62917 257 aaKnown RBP15.8■□□□□ 0.12
PCF11-203ENST00000530304 ERHP84090 104 aaKnown RBP15.8■□□□□ 0.12
PCF11-203ENST00000530304 CACNG8Q8WXS5 425 aa15.8■□□□□ 0.12
PCF11-203ENST00000530304 SAMD10Q9BYL1 202 aa15.8■□□□□ 0.12
PCF11-203ENST00000530304 DMXL1Q9Y485 3027 aa15.79■□□□□ 0.12
PCF11-203ENST00000530304 PSMB11A5LHX3 300 aa15.79■□□□□ 0.12
PCF11-203ENST00000530304 MGST1P10620 155 aaKnown RBP15.79■□□□□ 0.12
PCF11-203ENST00000530304 CCL3L1P16619 93 aa15.79■□□□□ 0.12
PCF11-203ENST00000530304 CDKN1AP38936 164 aa15.79■□□□□ 0.12
PCF11-203ENST00000530304 REG1BP48304 166 aa15.79■□□□□ 0.12
PCF11-203ENST00000530304 TCL1AP56279 114 aa15.79■□□□□ 0.12
PCF11-203ENST00000530304 Q6ZS92 163 aa15.79■□□□□ 0.12
PCF11-203ENST00000530304 FAM167A-AS1Q96KT0 104 aa15.79■□□□□ 0.12
PCF11-203ENST00000530304 IGF2BP2-AS1Q96M15 143 aa15.79■□□□□ 0.12
PCF11-203ENST00000530304 SLC25A2Q9BXI2 301 aa15.79■□□□□ 0.12
PCF11-203ENST00000530304 CACNA1HO95180 2353 aa15.79■□□□□ 0.12
PCF11-203ENST00000530304 DLL1O00548 723 aa15.79■□□□□ 0.12
PCF11-203ENST00000530304 CEACAM8P31997 349 aaPredicted RBP15.79■□□□□ 0.12
PCF11-203ENST00000530304 RPL19P84098 196 aaKnown RBP15.79■□□□□ 0.12
PCF11-203ENST00000530304 IBA57Q5T440 356 aaKnown RBP15.79■□□□□ 0.12
PCF11-203ENST00000530304 WDR73Q6P4I2 378 aa15.79■□□□□ 0.12
PCF11-203ENST00000530304 ZCCHC24Q8N2G6 241 aaKnown RBP15.79■□□□□ 0.12
PCF11-203ENST00000530304 OR5AN1Q8NGI8 311 aa15.79■□□□□ 0.12
PCF11-203ENST00000530304 MRPL32Q9BYC8 188 aaKnown RBP15.79■□□□□ 0.12
PCF11-203ENST00000530304 GNB4Q9HAV0 340 aa15.79■□□□□ 0.12
PCF11-203ENST00000530304 EP300Q09472 2414 aaPredicted RBP15.78■□□□□ 0.12
PCF11-203ENST00000530304 NKX6-3A6NJ46 265 aa15.78■□□□□ 0.12
PCF11-203ENST00000530304 M0R143 59 aa15.78■□□□□ 0.12
PCF11-203ENST00000530304 TMEM136Q6ZRR5 245 aa15.78■□□□□ 0.12
PCF11-203ENST00000530304 ATG101Q9BSB4 218 aa15.78■□□□□ 0.12
PCF11-203ENST00000530304 DNAJC4Q9NNZ3 241 aa15.78■□□□□ 0.12
PCF11-203ENST00000530304 MT-ND6P03923 174 aa15.78■□□□□ 0.12
PCF11-203ENST00000530304 SSBP2P81877 361 aaPredicted RBP15.78■□□□□ 0.12
PCF11-203ENST00000530304 ZNF124Q15973 351 aa15.78■□□□□ 0.12
PCF11-203ENST00000530304 IGF2-ASQ6U949 168 aa15.78■□□□□ 0.12
PCF11-203ENST00000530304 TEX43Q6ZNM6 134 aa15.78■□□□□ 0.12
PCF11-203ENST00000530304 NUP37Q8NFH4 326 aa15.78■□□□□ 0.12
PCF11-203ENST00000530304 FLYWCH2Q96CP2 140 aaKnown RBP15.78■□□□□ 0.12
PCF11-203ENST00000530304 MEF2CQ06413 473 aaPredicted RBP15.77■□□□□ 0.12
PCF11-203ENST00000530304 KIAA1644Q3SXP7 199 aa15.77■□□□□ 0.12
PCF11-203ENST00000530304 ZNF714Q96N38 554 aa15.77■□□□□ 0.12
PCF11-203ENST00000530304 TCAPO15273 167 aa15.77■□□□□ 0.11
PCF11-203ENST00000530304 FCN3O75636 299 aa15.77■□□□□ 0.11
PCF11-203ENST00000530304 TNFRSF1AP19438 455 aa15.77■□□□□ 0.11
PCF11-203ENST00000530304 UBE2L3P68036 154 aaKnown RBP15.77■□□□□ 0.11
PCF11-203ENST00000530304 TMEM177Q53S58 311 aa15.77■□□□□ 0.11
PCF11-203ENST00000530304 TMEM200BQ69YZ2 307 aa15.77■□□□□ 0.11
PCF11-203ENST00000530304 LINC00479Q96M42 142 aa15.77■□□□□ 0.11
PCF11-203ENST00000530304 SERTAD4Q9NUC0 356 aa15.77■□□□□ 0.11
PCF11-203ENST00000530304 SMIM27A0A1W2PRY6 76 aa15.76■□□□□ 0.11
PCF11-203ENST00000530304 RAB4AP20338 218 aa15.76■□□□□ 0.11
PCF11-203ENST00000530304 NHLRC2Q8NBF2 726 aa15.76■□□□□ 0.11
PCF11-203ENST00000530304 VN1R17PQ8TDU5 208 aa15.76■□□□□ 0.11
PCF11-203ENST00000530304 OTOGLQ3ZCN5 2332 aa15.76■□□□□ 0.11
PCF11-203ENST00000530304 K7EM74 188 aa15.76■□□□□ 0.11
PCF11-203ENST00000530304 USF1P22415 310 aaPredicted RBP15.76■□□□□ 0.11
PCF11-203ENST00000530304 WT1-ASQ06250 92 aa15.76■□□□□ 0.11
PCF11-203ENST00000530304 SIGLECL1Q8N7X8 197 aa15.76■□□□□ 0.11
PCF11-203ENST00000530304 INS-IGF2F8WCM5 200 aa15.75■□□□□ 0.11
PCF11-203ENST00000530304 GPX1P07203 203 aa15.75■□□□□ 0.11
PCF11-203ENST00000530304 BRS3P32247 399 aa15.75■□□□□ 0.11
PCF11-203ENST00000530304 DIAPH2-AS1Q14236 149 aa15.75■□□□□ 0.11
PCF11-203ENST00000530304 TMEM108Q6UXF1 575 aa15.75■□□□□ 0.11
PCF11-203ENST00000530304 ZNF705AQ6ZN79 300 aaPredicted RBP15.75■□□□□ 0.11
PCF11-203ENST00000530304 OR4C13Q8NGP0 309 aa15.75■□□□□ 0.11
PCF11-203ENST00000530304 RNF2Q99496 336 aa15.75■□□□□ 0.11
PCF11-203ENST00000530304 NEU1Q99519 415 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms