RNA–Protein interactions for RNA: ENST00000530296.5

CTSB-217, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-217ENST00000530296 MITD1Q8WV92 249 aa10.85□□□□□ -0.67
CTSB-217ENST00000530296 DUX3Q96PT4 197 aa10.85□□□□□ -0.67
CTSB-217ENST00000530296 COL7A1Q02388 2944 aa10.85□□□□□ -0.67
CTSB-217ENST00000530296 IGHV4OR15-8A0A075B7B6 117 aa10.84□□□□□ -0.67
CTSB-217ENST00000530296 A0A087WW49 117 aa10.84□□□□□ -0.67
CTSB-217ENST00000530296 ANKRD34BA5PLL1 514 aa10.84□□□□□ -0.67
CTSB-217ENST00000530296 FAM90A26D6RGX4 464 aa10.84□□□□□ -0.67
CTSB-217ENST00000530296 MED6O75586 246 aa10.84□□□□□ -0.67
CTSB-217ENST00000530296 NDUFB8O95169 186 aa10.84□□□□□ -0.67
CTSB-217ENST00000530296 LY86O95711 162 aa10.84□□□□□ -0.67
CTSB-217ENST00000530296 HTR2BP41595 481 aa10.84□□□□□ -0.67
CTSB-217ENST00000530296 ATP5IP56385 69 aaPredicted RBP10.84□□□□□ -0.67
CTSB-217ENST00000530296 TNFRSF9Q07011 255 aa10.84□□□□□ -0.67
CTSB-217ENST00000530296 RPEL1Q2QD12 228 aa10.84□□□□□ -0.67
CTSB-217ENST00000530296 B9D2Q9BPU9 175 aa10.84□□□□□ -0.67
CTSB-217ENST00000530296 HEYLQ9NQ87 328 aaPredicted RBP10.84□□□□□ -0.67
CTSB-217ENST00000530296 HSPB7Q9UBY9 170 aa10.84□□□□□ -0.67
CTSB-217ENST00000530296 OVOL1O14753 267 aa10.83□□□□□ -0.68
CTSB-217ENST00000530296 HOXB5P09067 269 aa10.83□□□□□ -0.68
CTSB-217ENST00000530296 HOXD3P31249 432 aaPredicted RBP10.83□□□□□ -0.68
CTSB-217ENST00000530296 INSL3P51460 131 aa10.83□□□□□ -0.68
CTSB-217ENST00000530296 DEFA5Q01523 94 aa10.83□□□□□ -0.68
CTSB-217ENST00000530296 IFITM3Q01628 133 aa10.83□□□□□ -0.68
CTSB-217ENST00000530296 EGFEM1PQ0D2K5 195 aa10.83□□□□□ -0.68
CTSB-217ENST00000530296 SPINK9Q5DT21 86 aa10.83□□□□□ -0.68
CTSB-217ENST00000530296 C19orf35Q6ZS72 473 aa10.83□□□□□ -0.68
CTSB-217ENST00000530296 ZNF431Q8TF32 576 aaPredicted RBP10.83□□□□□ -0.68
CTSB-217ENST00000530296 GPN1Q9HCN4 374 aaPredicted RBP10.83□□□□□ -0.68
CTSB-217ENST00000530296 PRAF2O60831 178 aa10.82□□□□□ -0.68
CTSB-217ENST00000530296 GGCTO75223 188 aaKnown RBP10.82□□□□□ -0.68
CTSB-217ENST00000530296 IL5P05113 134 aa10.82□□□□□ -0.68
CTSB-217ENST00000530296 C9orf66Q5T8R8 295 aa10.82□□□□□ -0.68
CTSB-217ENST00000530296 GGNBP1Q5YKI7 109 aa10.82□□□□□ -0.68
CTSB-217ENST00000530296 SPSB3Q6PJ21 355 aa10.82□□□□□ -0.68
CTSB-217ENST00000530296 DCUN1D4Q92564 292 aa10.82□□□□□ -0.68
CTSB-217ENST00000530296 MISP3Q96FF7 219 aa10.82□□□□□ -0.68
CTSB-217ENST00000530296 CIB3Q96Q77 187 aaPredicted RBP10.82□□□□□ -0.68
CTSB-217ENST00000530296 TXN2Q99757 166 aa10.82□□□□□ -0.68
CTSB-217ENST00000530296 ELOVL1Q9BW60 279 aa10.82□□□□□ -0.68
CTSB-217ENST00000530296 PALMDQ9NP74 551 aa10.82□□□□□ -0.68
CTSB-217ENST00000530296 C21orf62Q9NYP8 219 aa10.82□□□□□ -0.68
CTSB-217ENST00000530296 U3KQ87 197 aa10.82□□□□□ -0.68
CTSB-217ENST00000530296 PITX3O75364 302 aa10.81□□□□□ -0.68
CTSB-217ENST00000530296 SCGB2A1O75556 95 aa10.81□□□□□ -0.68
CTSB-217ENST00000530296 CLEC3BP05452 202 aa10.81□□□□□ -0.68
CTSB-217ENST00000530296 NHLRC4P0CG21 123 aaPredicted RBP10.81□□□□□ -0.68
CTSB-217ENST00000530296 ARL3P36405 182 aa10.81□□□□□ -0.68
CTSB-217ENST00000530296 SLURP1P55000 103 aa10.81□□□□□ -0.68
CTSB-217ENST00000530296 RPP30P78346 268 aaKnown RBP10.81□□□□□ -0.68
CTSB-217ENST00000530296 CLEC19AQ6UXS0 136 aa10.81□□□□□ -0.68
CTSB-217ENST00000530296 NRARPQ7Z6K4 114 aa10.81□□□□□ -0.68
CTSB-217ENST00000530296 SLC24A4Q8NFF2 622 aa10.81□□□□□ -0.68
CTSB-217ENST00000530296 ZNF502Q8TBZ5 544 aa10.81□□□□□ -0.68
CTSB-217ENST00000530296 DTD1Q8TEA8 209 aa10.81□□□□□ -0.68
CTSB-217ENST00000530296 DLX4Q92988 240 aaPredicted RBP10.81□□□□□ -0.68
CTSB-217ENST00000530296 BSCL2Q96G97 398 aaPredicted RBP10.81□□□□□ -0.68
CTSB-217ENST00000530296 PEMTQ9UBM1 199 aa10.81□□□□□ -0.68
CTSB-217ENST00000530296 DMRT1Q9Y5R6 373 aa10.81□□□□□ -0.68
CTSB-217ENST00000530296 RPS10-NUDT3A0A1W2PQS6 291 aa10.8□□□□□ -0.68
CTSB-217ENST00000530296 MFSD2BA6NFX1 497 aa10.8□□□□□ -0.68
CTSB-217ENST00000530296 SEC14L6B5MCN3 397 aa10.8□□□□□ -0.68
CTSB-217ENST00000530296 RNASE2P10153 161 aaKnown RBP10.8□□□□□ -0.68
CTSB-217ENST00000530296 MFAP2P55001 183 aa10.8□□□□□ -0.68
CTSB-217ENST00000530296 MFAP4P55083 255 aa10.8□□□□□ -0.68
CTSB-217ENST00000530296 KLF5Q13887 457 aaPredicted RBP10.8□□□□□ -0.68
CTSB-217ENST00000530296 BSXQ3C1V8 233 aa10.8□□□□□ -0.68
CTSB-217ENST00000530296 FAM106AQ4KMX7 169 aa10.8□□□□□ -0.68
CTSB-217ENST00000530296 C2orf83Q53S99 150 aa10.8□□□□□ -0.68
CTSB-217ENST00000530296 C11orf87Q6NUJ2 197 aa10.8□□□□□ -0.68
CTSB-217ENST00000530296 C12orf45Q8N5I9 185 aaPredicted RBP10.8□□□□□ -0.68
CTSB-217ENST00000530296 OR52B4Q8NGK2 314 aa10.8□□□□□ -0.68
CTSB-217ENST00000530296 RNASEH2CQ8TDP1 164 aaKnown RBP10.8□□□□□ -0.68
CTSB-217ENST00000530296 SCARB1Q8WTV0 552 aa10.8□□□□□ -0.68
CTSB-217ENST00000530296 CCDC140Q96MF4 163 aa10.8□□□□□ -0.68
CTSB-217ENST00000530296 SNRPGP15A8MWD9 76 aa10.79□□□□□ -0.68
CTSB-217ENST00000530296 INMT-MINDY4F8WBC2 141 aa10.79□□□□□ -0.68
CTSB-217ENST00000530296 K7EIM0 57 aa10.79□□□□□ -0.68
CTSB-217ENST00000530296 BMPR1BO00238 502 aa10.79□□□□□ -0.68
CTSB-217ENST00000530296 WRBO00258 174 aa10.79□□□□□ -0.68
CTSB-217ENST00000530296 ADAP1O75689 374 aa10.79□□□□□ -0.68
CTSB-217ENST00000530296 NXPH3O95157 252 aa10.79□□□□□ -0.68
CTSB-217ENST00000530296 PTTG1O95997 202 aa10.79□□□□□ -0.68
CTSB-217ENST00000530296 MT-CO2P00403 227 aa10.79□□□□□ -0.68
CTSB-217ENST00000530296 IFNA10P01566 189 aa10.79□□□□□ -0.68
CTSB-217ENST00000530296 TRBV12-3P01733 135 aa10.79□□□□□ -0.68
CTSB-217ENST00000530296 NPY1RP25929 384 aa10.79□□□□□ -0.68
CTSB-217ENST00000530296 FCGR2BP31994 310 aaPredicted RBP10.79□□□□□ -0.68
CTSB-217ENST00000530296 NPBWR1P48145 328 aa10.79□□□□□ -0.68
CTSB-217ENST00000530296 Q56UQ5 140 aa10.79□□□□□ -0.68
CTSB-217ENST00000530296 PVRIGQ6DKI7 326 aa10.79□□□□□ -0.68
CTSB-217ENST00000530296 ETFRF1Q6IPR1 90 aa10.79□□□□□ -0.68
CTSB-217ENST00000530296 GPHB5Q86YW7 130 aa10.79□□□□□ -0.68
CTSB-217ENST00000530296 UXS1Q8NBZ7 420 aa10.79□□□□□ -0.68
CTSB-217ENST00000530296 PINX1Q96BK5 328 aaKnown RBP10.79□□□□□ -0.68
CTSB-217ENST00000530296 OR4C12Q96R67 309 aa10.79□□□□□ -0.68
CTSB-217ENST00000530296 MARVELD1Q9BSK0 173 aa10.79□□□□□ -0.68
CTSB-217ENST00000530296 RBKSQ9H477 322 aa10.79□□□□□ -0.68
CTSB-217ENST00000530296 WI2-2373I1.2A0A1W2PRP0 233 aa10.78□□□□□ -0.68
CTSB-217ENST00000530296 I3L2K1 104 aa10.78□□□□□ -0.68
CTSB-217ENST00000530296 LGALS9O00182 355 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms