RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 CDK10Q15131 360 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 RBM48Q5RL73 367 aaKnown RBP2.57□□□□□ -2
PTPRC-213ENST00000529828 CST9LP1Q5W188 147 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 TTC23Q5W5X9 447 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 OR4A47Q6IF82 309 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 FAM89BQ8N5H3 189 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 MAPKAPK5-AS1Q8N8E1 139 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.57□□□□□ -2
PTPRC-213ENST00000529828 OR4A5Q8NH83 315 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 MISP3Q96FF7 219 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 GALNT14Q96FL9 552 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 BSCL2Q96G97 398 aaPredicted RBP2.57□□□□□ -2
PTPRC-213ENST00000529828 CMSS1Q9BQ75 279 aaKnown RBP2.57□□□□□ -2
PTPRC-213ENST00000529828 CHRDL1Q9BU40 450 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 C20orf24Q9BUV8 137 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 TM2D1Q9BX74 207 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 CSTL1Q9H114 145 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 LPAR5Q9H1C0 372 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 C11orf68Q9H3H3 251 aaKnown RBP2.57□□□□□ -2
PTPRC-213ENST00000529828 ZNF257Q9Y2Q1 563 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 SRRM2Q9UQ35 2752 aaKnown RBP2.57□□□□□ -2
PTPRC-213ENST00000529828 VPS13BQ7Z7G8 4022 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 TRBV6-6A0A0A6YYG2 114 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 LOC100130705A0A1B0GUX0 176 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 OR2T8A6NH00 312 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 OR4C46A6NHA9 309 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 TMEM14DPA8MWL7 114 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 TRDCB7Z8K6 153 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 K7EQM0 130 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 FABP7O15540 132 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 CTSDP07339 412 aaPredicted RBP2.57□□□□□ -2
PTPRC-213ENST00000529828 C8orf88P0DMB2 117 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 DEFA4P12838 97 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 CELP19835 753 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 CRHBPP24387 322 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 UCP1P25874 307 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 DCKP27707 260 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 HLA-DMBP28068 263 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 DUTP33316 252 aaKnown RBP2.57□□□□□ -2
PTPRC-213ENST00000529828 MAS1LP35410 378 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 RPL27AP46776 148 aaKnown RBP2.57□□□□□ -2
PTPRC-213ENST00000529828 TMEM50BP56557 158 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 RPL30P62888 115 aaKnown RBP2.57□□□□□ -2
PTPRC-213ENST00000529828 PLA2G7Q13093 441 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 LRRTM1Q86UE6 522 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 SLC25A42Q86VD7 318 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 MMD2Q8IY49 270 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 CENPSQ8N2Z9 138 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 GBGT1Q8N5D6 347 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 OR5H6Q8NGV6 325 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 GLYATL2Q8WU03 294 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 AP3S1Q92572 193 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 PACRGQ96M98 296 aaPredicted RBP2.57□□□□□ -2
PTPRC-213ENST00000529828 GPHA2Q96T91 129 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 MND1Q9BWT6 205 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 PECRQ9BY49 303 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 C5orf66Q9H5L9 145 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 BIN3Q9NQY0 253 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 MRPS18AQ9NVS2 196 aaKnown RBP2.57□□□□□ -2
PTPRC-213ENST00000529828 MRPL27Q9P0M9 148 aaKnown RBP2.57□□□□□ -2
PTPRC-213ENST00000529828 GHRLQ9UBU3 117 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 UFC1Q9Y3C8 167 aa2.57□□□□□ -2
PTPRC-213ENST00000529828 IGLV11-55A0A075B6I3 123 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 IGHV3OR16-13A0A075B7E8 117 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 IGHV3-74A0A0B4J1X5 117 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 IGHV4-28A0A0C4DH34 117 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 A0A1B0GV90 55 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 CCDC160A6NGH7 325 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 NPIPB5A8MRT5 1133 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 FOXI3A8MTJ6 420 aaPredicted RBP2.56□□□□□ -2
PTPRC-213ENST00000529828 DFFBO76075 338 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 KBTBD11O94819 623 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 TNFRSF6BO95407 300 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 UBBP0CG47 229 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 RRASP10301 218 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 MAP2K4P45985 399 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 RPL5P46777 297 aaKnown RBP2.56□□□□□ -2
PTPRC-213ENST00000529828 CLDN12P56749 244 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 GABARAPL2P60520 117 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 QRFPP83859 136 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 ASAH1Q13510 395 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 GUK1Q16774 197 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 OGFRL1Q5TC84 451 aaPredicted RBP2.56□□□□□ -2
PTPRC-213ENST00000529828 GLT8D1Q68CQ7 371 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 LEMD1Q68G75 181 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 LAMTOR1Q6IAA8 161 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 PLET1Q6UQ28 207 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 Q8NAQ8 132 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 UBAC2Q8NBM4 344 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 ZNF485Q8NCK3 441 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 OR4A4PQ8NGN8 299 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 OR13F1Q8NGS4 319 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 OSR1Q8TAX0 266 aaPredicted RBP2.56□□□□□ -2
PTPRC-213ENST00000529828 ZNF502Q8TBZ5 544 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 GPX8Q8TED1 209 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 TMEM190Q8WZ59 177 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 RRNAD1Q96FB5 475 aaKnown RBP2.56□□□□□ -2
PTPRC-213ENST00000529828 RNF2Q99496 336 aa2.56□□□□□ -2
PTPRC-213ENST00000529828 C7orf50Q9BRJ6 194 aaKnown RBP2.56□□□□□ -2
PTPRC-213ENST00000529828 GINS4Q9BRT9 223 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms