RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 FAM106AQ4KMX7 169 aa9.18□□□□□ -0.94
USH1C-208ENST00000529563 CADM3Q8N126 398 aa9.18□□□□□ -0.94
USH1C-208ENST00000529563 GLYATL2Q8WU03 294 aa9.18□□□□□ -0.94
USH1C-208ENST00000529563 IL22RA2Q969J5 263 aa9.18□□□□□ -0.94
USH1C-208ENST00000529563 LSM10Q969L4 123 aaKnown RBP9.18□□□□□ -0.94
USH1C-208ENST00000529563 LYSTQ99698 3801 aa9.18□□□□□ -0.94
USH1C-208ENST00000529563 SRSF8Q9BRL6 282 aaKnown RBP9.18□□□□□ -0.94
USH1C-208ENST00000529563 WFDC10AQ9H1F0 79 aa9.18□□□□□ -0.94
USH1C-208ENST00000529563 C20orf85Q9H1P6 137 aa9.18□□□□□ -0.94
USH1C-208ENST00000529563 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.18□□□□□ -0.94
USH1C-208ENST00000529563 ZNF257Q9Y2Q1 563 aa9.18□□□□□ -0.94
USH1C-208ENST00000529563 CSMD3Q7Z407 3707 aa9.17□□□□□ -0.94
USH1C-208ENST00000529563 TRBV9A0A0B4J1U6 114 aa9.17□□□□□ -0.94
USH1C-208ENST00000529563 ZNF785A8K8V0 405 aa9.17□□□□□ -0.94
USH1C-208ENST00000529563 PLA2G10O15496 165 aa9.17□□□□□ -0.94
USH1C-208ENST00000529563 SFT2D2O95562 160 aa9.17□□□□□ -0.94
USH1C-208ENST00000529563 TCRBP04435 133 aa9.17□□□□□ -0.94
USH1C-208ENST00000529563 REG1AP05451 166 aa9.17□□□□□ -0.94
USH1C-208ENST00000529563 H2AFB2P0C5Z0 115 aa9.17□□□□□ -0.94
USH1C-208ENST00000529563 SULT1A3P0DMM9 295 aa9.17□□□□□ -0.94
USH1C-208ENST00000529563 SULT1A4P0DMN0 295 aa9.17□□□□□ -0.94
USH1C-208ENST00000529563 OR13C7P0DN81 318 aa9.17□□□□□ -0.94
USH1C-208ENST00000529563 SUB1P53999 127 aaKnown RBP eCLIP9.17□□□□□ -0.94
USH1C-208ENST00000529563 ASAH1Q13510 395 aa9.17□□□□□ -0.94
USH1C-208ENST00000529563 PPP1R1AQ13522 171 aa9.17□□□□□ -0.94
USH1C-208ENST00000529563 TMEM187Q14656 261 aa9.17□□□□□ -0.94
USH1C-208ENST00000529563 MRGPRG-AS1Q2M3A8 158 aa9.17□□□□□ -0.94
USH1C-208ENST00000529563 CLEC19AQ6UXS0 136 aa9.17□□□□□ -0.94
USH1C-208ENST00000529563 SELENOHQ8IZQ5 122 aaKnown RBP9.17□□□□□ -0.94
USH1C-208ENST00000529563 OR52B4Q8NGK2 314 aa9.17□□□□□ -0.94
USH1C-208ENST00000529563 OR1S1Q8NH92 325 aa9.17□□□□□ -0.94
USH1C-208ENST00000529563 TMEM230Q96A57 120 aa9.17□□□□□ -0.94
USH1C-208ENST00000529563 EEF1AKMT3Q96AZ1 226 aa9.17□□□□□ -0.94
USH1C-208ENST00000529563 WDR89Q96FK6 387 aaPredicted RBP9.17□□□□□ -0.94
USH1C-208ENST00000529563 NUDT15Q9NV35 164 aa9.17□□□□□ -0.94
USH1C-208ENST00000529563 FLVCR2Q9UPI3 526 aa9.17□□□□□ -0.94
USH1C-208ENST00000529563 SELENOKQ9Y6D0 94 aa9.17□□□□□ -0.94
USH1C-208ENST00000529563 A0A0B4J2A0 478 aa9.16□□□□□ -0.94
USH1C-208ENST00000529563 DUXBA0A1W2PPF3 345 aa9.16□□□□□ -0.94
USH1C-208ENST00000529563 RBMY1BA6NDE4 496 aaKnown RBP9.16□□□□□ -0.94
USH1C-208ENST00000529563 RBMY1EA6NEQ0 496 aaKnown RBP9.16□□□□□ -0.94
USH1C-208ENST00000529563 NPIPB5A8MRT5 1133 aa9.16□□□□□ -0.94
USH1C-208ENST00000529563 CEBPZOSA8MTT3 80 aa9.16□□□□□ -0.94
USH1C-208ENST00000529563 IGKV1-39P01597 117 aa9.16□□□□□ -0.94
USH1C-208ENST00000529563 IGKV1D-39P04432 117 aa9.16□□□□□ -0.94
USH1C-208ENST00000529563 IL6RP08887 468 aaPredicted RBP9.16□□□□□ -0.94
USH1C-208ENST00000529563 OR4E1P0C645 316 aa9.16□□□□□ -0.94
USH1C-208ENST00000529563 RBMY1DP0C7P1 496 aaKnown RBP9.16□□□□□ -0.94
USH1C-208ENST00000529563 MYOD1P15172 320 aa9.16□□□□□ -0.94
USH1C-208ENST00000529563 ANXA7P20073 488 aaKnown RBP9.16□□□□□ -0.94
USH1C-208ENST00000529563 PSMB6P28072 239 aa9.16□□□□□ -0.94
USH1C-208ENST00000529563 HSPE1P61604 102 aaKnown RBP9.16□□□□□ -0.94
USH1C-208ENST00000529563 ANKRD55Q3KP44 614 aa9.16□□□□□ -0.94
USH1C-208ENST00000529563 SLC25A24Q6NUK1 477 aa9.16□□□□□ -0.94
USH1C-208ENST00000529563 PLET1Q6UQ28 207 aa9.16□□□□□ -0.94
USH1C-208ENST00000529563 UXS1Q8NBZ7 420 aa9.16□□□□□ -0.94
USH1C-208ENST00000529563 OR1L6Q8NGR2 347 aa9.16□□□□□ -0.94
USH1C-208ENST00000529563 GPN1Q9HCN4 374 aaPredicted RBP9.16□□□□□ -0.94
USH1C-208ENST00000529563 TMEM14BQ9NUH8 114 aa9.16□□□□□ -0.94
USH1C-208ENST00000529563 PRR13Q9NZ81 148 aa9.16□□□□□ -0.94
USH1C-208ENST00000529563 CACNG5Q9UF02 275 aa9.16□□□□□ -0.94
USH1C-208ENST00000529563 SHPKQ9UHJ6 478 aa9.16□□□□□ -0.94
USH1C-208ENST00000529563 S4R3C0 116 aa9.16□□□□□ -0.94
USH1C-208ENST00000529563 TMEM56-RWDD3S4R434 201 aa9.16□□□□□ -0.94
USH1C-208ENST00000529563 STARD9Q9P2P6 4700 aa9.15□□□□□ -0.94
USH1C-208ENST00000529563 C9orf170A2RU37 121 aa9.15□□□□□ -0.94
USH1C-208ENST00000529563 LGALS9O00182 355 aa9.15□□□□□ -0.94
USH1C-208ENST00000529563 SCAF4O95104 1147 aaKnown RBP9.15□□□□□ -0.94
USH1C-208ENST00000529563 IGKV1-5P01602 117 aa9.15□□□□□ -0.94
USH1C-208ENST00000529563 HOXB5P09067 269 aa9.15□□□□□ -0.94
USH1C-208ENST00000529563 AREGP15514 252 aa9.15□□□□□ -0.94
USH1C-208ENST00000529563 SMCO1Q147U7 214 aa9.15□□□□□ -0.94
USH1C-208ENST00000529563 IZUMO4Q1ZYL8 232 aa9.15□□□□□ -0.94
USH1C-208ENST00000529563 RBPMS2Q6ZRY4 209 aaKnown RBP9.15□□□□□ -0.94
USH1C-208ENST00000529563 LYG2Q86SG7 212 aa9.15□□□□□ -0.94
USH1C-208ENST00000529563 OR10W1Q8NGF6 305 aa9.15□□□□□ -0.94
USH1C-208ENST00000529563 CACNG8Q8WXS5 425 aa9.15□□□□□ -0.94
USH1C-208ENST00000529563 GGTLC1Q9BX51 225 aa9.15□□□□□ -0.94
USH1C-208ENST00000529563 HEYLQ9NQ87 328 aaPredicted RBP9.15□□□□□ -0.94
USH1C-208ENST00000529563 TMED3Q9Y3Q3 217 aa9.15□□□□□ -0.94
USH1C-208ENST00000529563 LOC102724200A0A096LPH7 203 aaPredicted RBP9.14□□□□□ -0.95
USH1C-208ENST00000529563 CXorf65A6NEN9 183 aa9.14□□□□□ -0.95
USH1C-208ENST00000529563 TEX22C9J3V5 150 aa9.14□□□□□ -0.95
USH1C-208ENST00000529563 ST8SIA3O43173 380 aa9.14□□□□□ -0.95
USH1C-208ENST00000529563 EDN2P20800 178 aa9.14□□□□□ -0.95
USH1C-208ENST00000529563 CBLN1P23435 193 aa9.14□□□□□ -0.95
USH1C-208ENST00000529563 SPCS3P61009 180 aa9.14□□□□□ -0.95
USH1C-208ENST00000529563 SUPT4H1P63272 117 aaKnown RBP9.14□□□□□ -0.95
USH1C-208ENST00000529563 PRCDQ00LT1 54 aa9.14□□□□□ -0.95
USH1C-208ENST00000529563 DHRS2Q13268 280 aa9.14□□□□□ -0.95
USH1C-208ENST00000529563 PMS2P11Q13670 270 aa9.14□□□□□ -0.95
USH1C-208ENST00000529563 SPINK9Q5DT21 86 aa9.14□□□□□ -0.95
USH1C-208ENST00000529563 LINC00322Q6ZN03 302 aaPredicted RBP9.14□□□□□ -0.95
USH1C-208ENST00000529563 C19orf35Q6ZS72 473 aa9.14□□□□□ -0.95
USH1C-208ENST00000529563 LYZL2Q7Z4W2 148 aa9.14□□□□□ -0.95
USH1C-208ENST00000529563 GPHB5Q86YW7 130 aa9.14□□□□□ -0.95
USH1C-208ENST00000529563 GPR146Q96CH1 333 aa9.14□□□□□ -0.95
USH1C-208ENST00000529563 ZC4H2Q9NQZ6 224 aa9.14□□□□□ -0.95
USH1C-208ENST00000529563 NDUFA4L2Q9NRX3 87 aa9.14□□□□□ -0.95
USH1C-208ENST00000529563 A0A0B4J293 547 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms