RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, human

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-215	ENST00000528965	DIRAS2	Q96HU8	199 aa		11.57	□□□□□ -0.56
CTSB-215	ENST00000528965	TXN2	Q99757	166 aa		11.57	□□□□□ -0.56
CTSB-215	ENST00000528965	MAP6D1	Q9H9H5	199 aa		11.57	□□□□□ -0.56
CTSB-215	ENST00000528965	SMPX	Q9UHP9	88 aa		11.57	□□□□□ -0.56
CTSB-215	ENST00000528965	IGHV7-4-1	A0A0J9YVY3	117 aa		11.56	□□□□□ -0.56
CTSB-215	ENST00000528965		F8W735	103 aa	Predicted RBP	11.56	□□□□□ -0.56
CTSB-215	ENST00000528965	YIF1A	O95070	293 aa		11.56	□□□□□ -0.56
CTSB-215	ENST00000528965	CD5	P06127	495 aa		11.56	□□□□□ -0.56
CTSB-215	ENST00000528965	FCGR2B	P31994	310 aa	Predicted RBP	11.56	□□□□□ -0.56
CTSB-215	ENST00000528965	TAS2R19	P59542	299 aa		11.56	□□□□□ -0.56
CTSB-215	ENST00000528965	OR52I2	Q8NH67	350 aa		11.56	□□□□□ -0.56
CTSB-215	ENST00000528965	OR4A16	Q8NH70	328 aa		11.56	□□□□□ -0.56
CTSB-215	ENST00000528965	MISP3	Q96FF7	219 aa		11.56	□□□□□ -0.56
CTSB-215	ENST00000528965	GINS3	Q9BRX5	216 aa		11.56	□□□□□ -0.56
CTSB-215	ENST00000528965	RHPN1-AS1	Q9BWJ2	59 aa		11.56	□□□□□ -0.56
CTSB-215	ENST00000528965	RABL2A	Q9UBK7	228 aa	Predicted RBP	11.56	□□□□□ -0.56
CTSB-215	ENST00000528965	KLK11	Q9UBX7	282 aa		11.56	□□□□□ -0.56
CTSB-215	ENST00000528965	RABL2B	Q9UNT1	228 aa		11.56	□□□□□ -0.56
CTSB-215	ENST00000528965	HYDIN	Q4G0P3	5121 aa		11.56	□□□□□ -0.56
CTSB-215	ENST00000528965	CTDSP2	O14595	271 aa		11.55	□□□□□ -0.56
CTSB-215	ENST00000528965	CHEK1	O14757	476 aa		11.55	□□□□□ -0.56
CTSB-215	ENST00000528965	CD3D	P04234	171 aa		11.55	□□□□□ -0.56
CTSB-215	ENST00000528965	CTSG	P08311	255 aa		11.55	□□□□□ -0.56
CTSB-215	ENST00000528965	TBP	P20226	339 aa		11.55	□□□□□ -0.56
CTSB-215	ENST00000528965	PAFAH1B2	P68402	229 aa		11.55	□□□□□ -0.56
CTSB-215	ENST00000528965	MRPS10	P82664	201 aa	Known RBP	11.55	□□□□□ -0.56
CTSB-215	ENST00000528965	EWSR1	Q01844	656 aa	Known RBP eCLIP	11.55	□□□□□ -0.56
CTSB-215	ENST00000528965	SCGB2B2	Q4G0G5	96 aa		11.55	□□□□□ -0.56
CTSB-215	ENST00000528965	H2BFWT	Q7Z2G1	175 aa		11.55	□□□□□ -0.56
CTSB-215	ENST00000528965	TBC1D26	Q86UD7	250 aa		11.55	□□□□□ -0.56
CTSB-215	ENST00000528965	ZNF114	Q8NC26	417 aa		11.55	□□□□□ -0.56
CTSB-215	ENST00000528965	OR10C1	Q96KK4	312 aa		11.55	□□□□□ -0.56
CTSB-215	ENST00000528965	RNF2	Q99496	336 aa		11.55	□□□□□ -0.56
CTSB-215	ENST00000528965	MTFP1	Q9UDX5	166 aa		11.55	□□□□□ -0.56
CTSB-215	ENST00000528965	MPTX1	A8MV57	137 aa		11.54	□□□□□ -0.56
CTSB-215	ENST00000528965	GNG7	O60262	68 aa		11.54	□□□□□ -0.56
CTSB-215	ENST00000528965	RAB3D	O95716	219 aa		11.54	□□□□□ -0.56
CTSB-215	ENST00000528965	UCP3	P55916	312 aa		11.54	□□□□□ -0.56
CTSB-215	ENST00000528965	PRCD	Q00LT1	54 aa		11.54	□□□□□ -0.56
CTSB-215	ENST00000528965	ARRDC1	Q8N5I2	433 aa		11.54	□□□□□ -0.56
CTSB-215	ENST00000528965	ZFAND1	Q8TCF1	268 aa		11.54	□□□□□ -0.56
CTSB-215	ENST00000528965	ABHD1	Q96SE0	405 aa		11.54	□□□□□ -0.56
CTSB-215	ENST00000528965	MFF	Q9GZY8	342 aa		11.54	□□□□□ -0.56
CTSB-215	ENST00000528965	CSTL1	Q9H114	145 aa		11.54	□□□□□ -0.56
CTSB-215	ENST00000528965	CCDC59	Q9P031	241 aa	Known RBP	11.54	□□□□□ -0.56
CTSB-215	ENST00000528965	PLEC	Q15149	4684 aa	Known RBP	11.54	□□□□□ -0.56
CTSB-215	ENST00000528965	TRAV14DV4	A0A0A6YYC5	116 aa		11.53	□□□□□ -0.56
CTSB-215	ENST00000528965	DISC1	C4P0D8	188 aa		11.53	□□□□□ -0.56
CTSB-215	ENST00000528965	GABARAP	H6UMI1	98 aa		11.53	□□□□□ -0.56
CTSB-215	ENST00000528965		I3L2K1	104 aa		11.53	□□□□□ -0.56
CTSB-215	ENST00000528965	ATG12	O94817	140 aa		11.53	□□□□□ -0.56
CTSB-215	ENST00000528965	MT-CO2	P00403	227 aa		11.53	□□□□□ -0.56
CTSB-215	ENST00000528965	TFPI2	P48307	235 aa		11.53	□□□□□ -0.56
CTSB-215	ENST00000528965	ERH	P84090	104 aa	Known RBP	11.53	□□□□□ -0.56
CTSB-215	ENST00000528965	APRG1	Q8IVJ8	170 aa		11.53	□□□□□ -0.56
CTSB-215	ENST00000528965	CCDC71L	Q8N9Z2	235 aa		11.53	□□□□□ -0.56
CTSB-215	ENST00000528965	TMEM229B	Q8NBD8	167 aa		11.53	□□□□□ -0.56
CTSB-215	ENST00000528965	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.53	□□□□□ -0.56
CTSB-215	ENST00000528965	NXF2	Q9GZY0	626 aa	Known RBP	11.53	□□□□□ -0.56
CTSB-215	ENST00000528965	C11orf68	Q9H3H3	251 aa	Known RBP	11.53	□□□□□ -0.56
CTSB-215	ENST00000528965	COPZ2	Q9P299	210 aa		11.53	□□□□□ -0.56
CTSB-215	ENST00000528965	DBX1	A6NMT0	343 aa		11.52	□□□□□ -0.57
CTSB-215	ENST00000528965	NPBWR1	P48145	328 aa		11.52	□□□□□ -0.57
CTSB-215	ENST00000528965	PPP5C	P53041	499 aa		11.52	□□□□□ -0.57
CTSB-215	ENST00000528965	SSBP1	Q04837	148 aa	Known RBP	11.52	□□□□□ -0.57
CTSB-215	ENST00000528965	MEF2D	Q14814	521 aa		11.52	□□□□□ -0.57
CTSB-215	ENST00000528965	STEAP1B	Q6NZ63	245 aa		11.52	□□□□□ -0.57
CTSB-215	ENST00000528965	TERB2	Q8NHR7	220 aa		11.52	□□□□□ -0.57
CTSB-215	ENST00000528965	MCFD2	Q8NI22	146 aa		11.52	□□□□□ -0.57
CTSB-215	ENST00000528965	RNASE11	Q8TAA1	199 aa	Known RBP	11.52	□□□□□ -0.57
CTSB-215	ENST00000528965	DYNC2LI1	Q8TCX1	351 aa		11.52	□□□□□ -0.57
CTSB-215	ENST00000528965	PINX1	Q96BK5	328 aa	Known RBP	11.52	□□□□□ -0.57
CTSB-215	ENST00000528965	ZNF486	Q96H40	463 aa	Predicted RBP	11.52	□□□□□ -0.57
CTSB-215	ENST00000528965	SEC22A	Q96IW7	307 aa		11.52	□□□□□ -0.57
CTSB-215	ENST00000528965	RARRES2	Q99969	163 aa		11.52	□□□□□ -0.57
CTSB-215	ENST00000528965	MIXL1	Q9H2W2	232 aa		11.52	□□□□□ -0.57
CTSB-215	ENST00000528965	TMEM231	Q9H6L2	316 aa		11.52	□□□□□ -0.57
CTSB-215	ENST00000528965	RSL24D1	Q9UHA3	163 aa	Known RBP	11.52	□□□□□ -0.57
CTSB-215	ENST00000528965	C14orf166	Q9Y224	244 aa	Known RBP	11.52	□□□□□ -0.57
CTSB-215	ENST00000528965	IGKV3-7	A0A075B6H7	116 aa		11.51	□□□□□ -0.57
CTSB-215	ENST00000528965	IGHV3-49	A0A0A0MS15	119 aa		11.51	□□□□□ -0.57
CTSB-215	ENST00000528965	FABP12	A6NFH5	140 aa		11.51	□□□□□ -0.57
CTSB-215	ENST00000528965	SCGB2A1	O75556	95 aa		11.51	□□□□□ -0.57
CTSB-215	ENST00000528965	HSPE1	P61604	102 aa	Known RBP	11.51	□□□□□ -0.57
CTSB-215	ENST00000528965	SLC35G3	Q8N808	338 aa		11.51	□□□□□ -0.57
CTSB-215	ENST00000528965	MRGPRF	Q96AM1	343 aa		11.51	□□□□□ -0.57
CTSB-215	ENST00000528965		H3BMQ9	156 aa		11.5	□□□□□ -0.57
CTSB-215	ENST00000528965	DNASE2	O00115	360 aa	Predicted RBP	11.5	□□□□□ -0.57
CTSB-215	ENST00000528965	CORT	O00230	105 aa		11.5	□□□□□ -0.57
CTSB-215	ENST00000528965	DFFB	O76075	338 aa		11.5	□□□□□ -0.57
CTSB-215	ENST00000528965	IFNA4	P05014	189 aa		11.5	□□□□□ -0.57
CTSB-215	ENST00000528965	PI3	P19957	117 aa		11.5	□□□□□ -0.57
CTSB-215	ENST00000528965	S100A5	P33763	92 aa		11.5	□□□□□ -0.57
CTSB-215	ENST00000528965	SNCA	P37840	140 aa		11.5	□□□□□ -0.57
CTSB-215	ENST00000528965	PIGP	P57054	158 aa		11.5	□□□□□ -0.57
CTSB-215	ENST00000528965	RBMS2	Q15434	407 aa	Known RBP	11.5	□□□□□ -0.57
CTSB-215	ENST00000528965	TRIM16L	Q309B1	348 aa		11.5	□□□□□ -0.57
CTSB-215	ENST00000528965	LGALS9C	Q6DKI2	356 aa		11.5	□□□□□ -0.57
CTSB-215	ENST00000528965	TCF24	Q7RTU0	167 aa		11.5	□□□□□ -0.57
CTSB-215	ENST00000528965	GBGT1	Q8N5D6	347 aa		11.5	□□□□□ -0.57

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