RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 HCFC1P51610 2035 aa10.28□□□□□ -0.76
CAPN1-208ENST00000527323 NRN1Q9NPD7 142 aa10.27□□□□□ -0.76
CAPN1-208ENST00000527323 OR10J4P0C629 311 aa10.27□□□□□ -0.77
CAPN1-208ENST00000527323 NTF3P20783 257 aa10.27□□□□□ -0.77
CAPN1-208ENST00000527323 GATA2P23769 480 aaPredicted RBP10.27□□□□□ -0.77
CAPN1-208ENST00000527323 HSPE1P61604 102 aaKnown RBP10.27□□□□□ -0.77
CAPN1-208ENST00000527323 AARDQ4LEZ3 155 aa10.27□□□□□ -0.77
CAPN1-208ENST00000527323 SLC45A2Q9UMX9 530 aa10.27□□□□□ -0.77
CAPN1-208ENST00000527323 TRBV9A0A0B4J1U6 114 aa10.27□□□□□ -0.77
CAPN1-208ENST00000527323 WDR73Q6P4I2 378 aa10.27□□□□□ -0.77
CAPN1-208ENST00000527323 C9orf106Q8NAJ2 232 aa10.27□□□□□ -0.77
CAPN1-208ENST00000527323 C11orf52Q96A22 123 aa10.27□□□□□ -0.77
CAPN1-208ENST00000527323 STARD4Q96DR4 205 aa10.27□□□□□ -0.77
CAPN1-208ENST00000527323 TXN2Q99757 166 aa10.27□□□□□ -0.77
CAPN1-208ENST00000527323 LY96Q9Y6Y9 160 aa10.27□□□□□ -0.77
CAPN1-208ENST00000527323 SRIP30626 198 aa10.26□□□□□ -0.77
CAPN1-208ENST00000527323 SPATA45Q537H7 98 aa10.26□□□□□ -0.77
CAPN1-208ENST00000527323 COL5A1-AS1Q5SY13 56 aa10.26□□□□□ -0.77
CAPN1-208ENST00000527323 OR4A47Q6IF82 309 aa10.26□□□□□ -0.77
CAPN1-208ENST00000527323 Q6ZT83 130 aa10.26□□□□□ -0.77
CAPN1-208ENST00000527323 FAM214BQ7L5A3 538 aa10.26□□□□□ -0.77
CAPN1-208ENST00000527323 OR4B1Q8NGF8 309 aa10.26□□□□□ -0.77
CAPN1-208ENST00000527323 CORO2AQ92828 525 aa10.26□□□□□ -0.77
CAPN1-208ENST00000527323 RNF2Q99496 336 aa10.26□□□□□ -0.77
CAPN1-208ENST00000527323 NABP2Q9BQ15 211 aa10.26□□□□□ -0.77
CAPN1-208ENST00000527323 TMEM167BQ9NRX6 74 aa10.26□□□□□ -0.77
CAPN1-208ENST00000527323 RNF114Q9Y508 228 aa10.26□□□□□ -0.77
CAPN1-208ENST00000527323 ZNF462Q96JM2 2506 aa10.26□□□□□ -0.77
CAPN1-208ENST00000527323 IGKV1D-17A0A075B6S4 117 aa10.26□□□□□ -0.77
CAPN1-208ENST00000527323 C15orf61A6NNL5 157 aa10.26□□□□□ -0.77
CAPN1-208ENST00000527323 MGST3O14880 152 aa10.26□□□□□ -0.77
CAPN1-208ENST00000527323 CECR9P0C854 216 aa10.26□□□□□ -0.77
CAPN1-208ENST00000527323 MMDQ15546 238 aa10.26□□□□□ -0.77
CAPN1-208ENST00000527323 TBR1Q16650 682 aa10.26□□□□□ -0.77
CAPN1-208ENST00000527323 DMRTA1Q5VZB9 504 aa10.26□□□□□ -0.77
CAPN1-208ENST00000527323 MRPL52Q86TS9 123 aaKnown RBP10.26□□□□□ -0.77
CAPN1-208ENST00000527323 RBM14Q96PK6 669 aaKnown RBP10.26□□□□□ -0.77
CAPN1-208ENST00000527323 IFI27L2Q9H2X8 130 aa10.26□□□□□ -0.77
CAPN1-208ENST00000527323 AHRRA9YTQ3 701 aa10.25□□□□□ -0.77
CAPN1-208ENST00000527323 MT-ND6P03923 174 aa10.25□□□□□ -0.77
CAPN1-208ENST00000527323 KIR2DS2P43631 304 aa10.25□□□□□ -0.77
CAPN1-208ENST00000527323 UTF1Q5T230 341 aa10.25□□□□□ -0.77
CAPN1-208ENST00000527323 MOB3BQ86TA1 216 aa10.25□□□□□ -0.77
CAPN1-208ENST00000527323 LYG1Q8N1E2 194 aa10.25□□□□□ -0.77
CAPN1-208ENST00000527323 FAM19A2Q8N3H0 131 aa10.25□□□□□ -0.77
CAPN1-208ENST00000527323 TECRQ9NZ01 308 aaKnown RBP10.25□□□□□ -0.77
CAPN1-208ENST00000527323 PPIAL4AQ9Y536 164 aa10.25□□□□□ -0.77
CAPN1-208ENST00000527323 TRGV8A0A0C4DH27 118 aa10.25□□□□□ -0.77
CAPN1-208ENST00000527323 AREGP15514 252 aa10.25□□□□□ -0.77
CAPN1-208ENST00000527323 CX3CL1P78423 397 aa10.25□□□□□ -0.77
CAPN1-208ENST00000527323 RCHY1Q96PM5 261 aa10.25□□□□□ -0.77
CAPN1-208ENST00000527323 SFXN3Q9BWM7 321 aa10.25□□□□□ -0.77
CAPN1-208ENST00000527323 OR51B2Q9Y5P1 312 aa10.25□□□□□ -0.77
CAPN1-208ENST00000527323 TRAV34A0A0B4J273 112 aa10.25□□□□□ -0.77
CAPN1-208ENST00000527323 A0A1W2PS18 150 aa10.25□□□□□ -0.77
CAPN1-208ENST00000527323 COMPP49747 757 aaPredicted RBP10.25□□□□□ -0.77
CAPN1-208ENST00000527323 RAB7AP51149 207 aa10.25□□□□□ -0.77
CAPN1-208ENST00000527323 C1orf229Q6ZS94 237 aaPredicted RBP10.25□□□□□ -0.77
CAPN1-208ENST00000527323 C11orf42Q8N5U0 333 aa10.25□□□□□ -0.77
CAPN1-208ENST00000527323 WNT10AQ9GZT5 417 aa10.25□□□□□ -0.77
CAPN1-208ENST00000527323 TUBG2Q9NRH3 451 aa10.25□□□□□ -0.77
CAPN1-208ENST00000527323 CALYQ9NYX4 217 aa10.25□□□□□ -0.77
CAPN1-208ENST00000527323 LRRK2Q5S007 2527 aa10.24□□□□□ -0.77
CAPN1-208ENST00000527323 J3QR06 171 aa10.24□□□□□ -0.77
CAPN1-208ENST00000527323 OR5G3P0C626 314 aa10.24□□□□□ -0.77
CAPN1-208ENST00000527323 LINC00869P0C866 280 aa10.24□□□□□ -0.77
CAPN1-208ENST00000527323 LOXL3P58215 753 aa10.24□□□□□ -0.77
CAPN1-208ENST00000527323 PRR20EP86478 221 aa10.24□□□□□ -0.77
CAPN1-208ENST00000527323 PRR20CP86479 221 aa10.24□□□□□ -0.77
CAPN1-208ENST00000527323 PRR20DP86480 221 aa10.24□□□□□ -0.77
CAPN1-208ENST00000527323 PRR20BP86481 221 aa10.24□□□□□ -0.77
CAPN1-208ENST00000527323 PRR20AP86496 221 aa10.24□□□□□ -0.77
CAPN1-208ENST00000527323 MZT1Q08AG7 82 aa10.24□□□□□ -0.77
CAPN1-208ENST00000527323 IBA57Q5T440 356 aaKnown RBP10.24□□□□□ -0.77
CAPN1-208ENST00000527323 Q6ZN92 141 aa10.24□□□□□ -0.77
CAPN1-208ENST00000527323 TMEM136Q6ZRR5 245 aa10.24□□□□□ -0.77
CAPN1-208ENST00000527323 FAM90A1Q86YD7 464 aa10.24□□□□□ -0.77
CAPN1-208ENST00000527323 C1orf174Q8IYL3 243 aa10.24□□□□□ -0.77
CAPN1-208ENST00000527323 NHLRC2Q8NBF2 726 aa10.24□□□□□ -0.77
CAPN1-208ENST00000527323 BORCS7Q96B45 105 aa10.24□□□□□ -0.77
CAPN1-208ENST00000527323 SLC35D1Q9NTN3 355 aa10.24□□□□□ -0.77
CAPN1-208ENST00000527323 CSMD1Q96PZ7 3565 aa10.24□□□□□ -0.77
CAPN1-208ENST00000527323 IGKV3-15P01624 115 aa10.24□□□□□ -0.77
CAPN1-208ENST00000527323 MRPS11P82912 194 aaKnown RBP10.24□□□□□ -0.77
CAPN1-208ENST00000527323 GAGE1Q13065 139 aa10.24□□□□□ -0.77
CAPN1-208ENST00000527323 KCNS1Q96KK3 526 aa10.24□□□□□ -0.77
CAPN1-208ENST00000527323 ZNF331Q9NQX6 463 aaPredicted RBP10.24□□□□□ -0.77
CAPN1-208ENST00000527323 ANKHD1Q8IWZ3 2542 aaKnown RBP10.23□□□□□ -0.77
CAPN1-208ENST00000527323 SIAH2O43255 324 aa10.23□□□□□ -0.77
CAPN1-208ENST00000527323 CA1P00915 261 aaPredicted RBP10.23□□□□□ -0.77
CAPN1-208ENST00000527323 GNG10P50151 68 aa10.23□□□□□ -0.77
CAPN1-208ENST00000527323 ZNF83P51522 516 aa10.23□□□□□ -0.77
CAPN1-208ENST00000527323 MLANAQ16655 118 aa10.23□□□□□ -0.77
CAPN1-208ENST00000527323 OXLD1Q5BKU9 147 aa10.23□□□□□ -0.77
CAPN1-208ENST00000527323 ATOH7Q8N100 152 aa10.23□□□□□ -0.77
CAPN1-208ENST00000527323 OSTCQ9NRP0 149 aa10.23□□□□□ -0.77
CAPN1-208ENST00000527323 SAA2-SAA4A0A096LPE2 208 aa10.23□□□□□ -0.77
CAPN1-208ENST00000527323 TCF21O43680 179 aa10.23□□□□□ -0.77
CAPN1-208ENST00000527323 APCSP02743 223 aa10.23□□□□□ -0.77
CAPN1-208ENST00000527323 SAA2P0DJI9 122 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms