RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 IFITM5A6NNB3 132 aa11.49□□□□□ -0.57
CHMP4A-203ENST00000527154 PDCD5O14737 125 aa11.49□□□□□ -0.57
CHMP4A-203ENST00000527154 RGS10O43665 173 aa11.49□□□□□ -0.57
CHMP4A-203ENST00000527154 OR10A3P58181 314 aa11.49□□□□□ -0.57
CHMP4A-203ENST00000527154 CDNFQ49AH0 187 aa11.49□□□□□ -0.57
CHMP4A-203ENST00000527154 MGLLQ99685 303 aa11.49□□□□□ -0.57
CHMP4A-203ENST00000527154 DUSP21Q9H596 190 aa11.49□□□□□ -0.57
CHMP4A-203ENST00000527154 DKK2Q9UBU2 259 aa11.49□□□□□ -0.57
CHMP4A-203ENST00000527154 NBDYA0A0U1RRE5 68 aa11.48□□□□□ -0.57
CHMP4A-203ENST00000527154 TMEM189A5PLL7 270 aa11.48□□□□□ -0.57
CHMP4A-203ENST00000527154 MARCH11A6NNE9 402 aa11.48□□□□□ -0.57
CHMP4A-203ENST00000527154 EPM2AB3EWF7 344 aa11.48□□□□□ -0.57
CHMP4A-203ENST00000527154 SSX5O60225 188 aa11.48□□□□□ -0.57
CHMP4A-203ENST00000527154 EIF4EP06730 217 aaKnown RBP11.48□□□□□ -0.57
CHMP4A-203ENST00000527154 FGF9P31371 208 aaPredicted RBP11.48□□□□□ -0.57
CHMP4A-203ENST00000527154 CATR1Q13166 79 aa11.48□□□□□ -0.57
CHMP4A-203ENST00000527154 DMBX1Q8NFW5 382 aa11.48□□□□□ -0.57
CHMP4A-203ENST00000527154 OR13F1Q8NGS4 319 aa11.48□□□□□ -0.57
CHMP4A-203ENST00000527154 ZNRF2Q8NHG8 242 aa11.48□□□□□ -0.57
CHMP4A-203ENST00000527154 SECTM1Q8WVN6 248 aa11.48□□□□□ -0.57
CHMP4A-203ENST00000527154 SLC25A46Q96AG3 418 aa11.48□□□□□ -0.57
CHMP4A-203ENST00000527154 C1QTNF4Q9BXJ3 329 aa11.48□□□□□ -0.57
CHMP4A-203ENST00000527154 MT-CO2P00403 227 aa11.47□□□□□ -0.57
CHMP4A-203ENST00000527154 PPYP01298 95 aa11.47□□□□□ -0.57
CHMP4A-203ENST00000527154 ZNF688P0C7X2 276 aa11.47□□□□□ -0.57
CHMP4A-203ENST00000527154 ACTL10Q5JWF8 245 aa11.47□□□□□ -0.57
CHMP4A-203ENST00000527154 ZNF600Q6ZNG1 722 aa11.47□□□□□ -0.57
CHMP4A-203ENST00000527154 SPATA12Q7Z6I5 190 aa11.47□□□□□ -0.57
CHMP4A-203ENST00000527154 NUDCD2Q8WVJ2 157 aa11.47□□□□□ -0.57
CHMP4A-203ENST00000527154 RAB40CQ96S21 281 aa11.47□□□□□ -0.57
CHMP4A-203ENST00000527154 VCX3BQ9H321 246 aa11.47□□□□□ -0.57
CHMP4A-203ENST00000527154 TMEM231Q9H6L2 316 aa11.47□□□□□ -0.57
CHMP4A-203ENST00000527154 RABAC1Q9UI14 185 aa11.47□□□□□ -0.57
CHMP4A-203ENST00000527154 TRAV1-2A0A0B4J238 106 aa11.46□□□□□ -0.57
CHMP4A-203ENST00000527154 IGHV3-66A0A0C4DH42 116 aa11.46□□□□□ -0.57
CHMP4A-203ENST00000527154 A0A1B0GU03 582 aa11.46□□□□□ -0.57
CHMP4A-203ENST00000527154 TEX48A0A1B0GUV7 120 aa11.46□□□□□ -0.57
CHMP4A-203ENST00000527154 SMIM9A6NGZ8 99 aa11.46□□□□□ -0.57
CHMP4A-203ENST00000527154 ANKRD65E5RJM6 399 aa11.46□□□□□ -0.57
CHMP4A-203ENST00000527154 MYL9P24844 172 aa11.46□□□□□ -0.57
CHMP4A-203ENST00000527154 CRYBB3P26998 211 aa11.46□□□□□ -0.57
CHMP4A-203ENST00000527154 KCTD21Q4G0X4 260 aa11.46□□□□□ -0.57
CHMP4A-203ENST00000527154 PRSS48Q7RTY5 328 aa11.46□□□□□ -0.57
CHMP4A-203ENST00000527154 TMEM56Q96MV1 263 aa11.46□□□□□ -0.57
CHMP4A-203ENST00000527154 ATG5Q9H1Y0 275 aa11.46□□□□□ -0.57
CHMP4A-203ENST00000527154 OR51B2Q9Y5P1 312 aa11.46□□□□□ -0.57
CHMP4A-203ENST00000527154 PUS1Q9Y606 427 aaKnown RBP eCLIP11.46□□□□□ -0.57
CHMP4A-203ENST00000527154 DBX1A6NMT0 343 aa11.45□□□□□ -0.58
CHMP4A-203ENST00000527154 GNG7O60262 68 aa11.45□□□□□ -0.58
CHMP4A-203ENST00000527154 INAFM2P0DMQ5 153 aa11.45□□□□□ -0.58
CHMP4A-203ENST00000527154 RAB3BP20337 219 aa11.45□□□□□ -0.58
CHMP4A-203ENST00000527154 FCGR2CP31995 323 aa11.45□□□□□ -0.58
CHMP4A-203ENST00000527154 AQP4P55087 323 aa11.45□□□□□ -0.58
CHMP4A-203ENST00000527154 ZNF818PQ6ZRF7 136 aa11.45□□□□□ -0.58
CHMP4A-203ENST00000527154 NIPSNAP3BQ9BS92 247 aa11.45□□□□□ -0.58
CHMP4A-203ENST00000527154 YTHDF1Q9BYJ9 559 aaKnown RBP11.45□□□□□ -0.58
CHMP4A-203ENST00000527154 SEPSECSQ9HD40 501 aaKnown RBP11.45□□□□□ -0.58
CHMP4A-203ENST00000527154 A0A1W2PS18 150 aa11.44□□□□□ -0.58
CHMP4A-203ENST00000527154 TMEM235A6NFC5 223 aa11.44□□□□□ -0.58
CHMP4A-203ENST00000527154 KRTAP10-2P60368 255 aa11.44□□□□□ -0.58
CHMP4A-203ENST00000527154 RPL11P62913 178 aaKnown RBP11.44□□□□□ -0.58
CHMP4A-203ENST00000527154 TMEM88Q6PEY1 159 aa11.44□□□□□ -0.58
CHMP4A-203ENST00000527154 C15orf53Q8NAA6 179 aa11.44□□□□□ -0.58
CHMP4A-203ENST00000527154 STXBP6Q8NFX7 210 aa11.44□□□□□ -0.58
CHMP4A-203ENST00000527154 PRNDQ9UKY0 176 aa11.44□□□□□ -0.58
CHMP4A-203ENST00000527154 NSG2Q9Y328 171 aa11.44□□□□□ -0.58
CHMP4A-203ENST00000527154 H3BMM0 161 aa11.43□□□□□ -0.58
CHMP4A-203ENST00000527154 BTF3P20290 206 aaKnown RBP11.43□□□□□ -0.58
CHMP4A-203ENST00000527154 F2RP25116 425 aa11.43□□□□□ -0.58
CHMP4A-203ENST00000527154 GNRHRP30968 328 aa11.43□□□□□ -0.58
CHMP4A-203ENST00000527154 P2RY1P47900 373 aa11.43□□□□□ -0.58
CHMP4A-203ENST00000527154 NUTF2P61970 127 aaKnown RBP11.43□□□□□ -0.58
CHMP4A-203ENST00000527154 FAM222AQ5U5X8 452 aa11.43□□□□□ -0.58
CHMP4A-203ENST00000527154 OR51H1Q8NH63 302 aa11.43□□□□□ -0.58
CHMP4A-203ENST00000527154 HINT2Q9BX68 163 aa11.43□□□□□ -0.58
CHMP4A-203ENST00000527154 SLC5A7Q9GZV3 580 aa11.43□□□□□ -0.58
CHMP4A-203ENST00000527154 FKBP11Q9NYL4 201 aa11.43□□□□□ -0.58
CHMP4A-203ENST00000527154 XCL2Q9UBD3 114 aa11.43□□□□□ -0.58
CHMP4A-203ENST00000527154 U3KQE9 123 aa11.43□□□□□ -0.58
CHMP4A-203ENST00000527154 FLG2Q5D862 2391 aaPredicted RBP11.42□□□□□ -0.58
CHMP4A-203ENST00000527154 SMIM30A4D0T7 59 aa11.42□□□□□ -0.58
CHMP4A-203ENST00000527154 TMEM50AO95807 157 aa11.42□□□□□ -0.58
CHMP4A-203ENST00000527154 IGHV3-48P01763 117 aa11.42□□□□□ -0.58
CHMP4A-203ENST00000527154 PTHLHP12272 177 aa11.42□□□□□ -0.58
CHMP4A-203ENST00000527154 NPPCP23582 126 aa11.42□□□□□ -0.58
CHMP4A-203ENST00000527154 NPBWR1P48145 328 aa11.42□□□□□ -0.58
CHMP4A-203ENST00000527154 ARPC4P59998 168 aa11.42□□□□□ -0.58
CHMP4A-203ENST00000527154 ERVK-16P61578 105 aa11.42□□□□□ -0.58
CHMP4A-203ENST00000527154 TBCEQ15813 527 aaPredicted RBP11.42□□□□□ -0.58
CHMP4A-203ENST00000527154 MISP3Q96FF7 219 aa11.42□□□□□ -0.58
CHMP4A-203ENST00000527154 HMCN2Q8NDA2 5059 aa11.41□□□□□ -0.58
CHMP4A-203ENST00000527154 HSPA13P48723 471 aa11.41□□□□□ -0.58
CHMP4A-203ENST00000527154 GNG2P59768 71 aa11.41□□□□□ -0.58
CHMP4A-203ENST00000527154 AADACL3Q5VUY0 350 aa11.41□□□□□ -0.58
CHMP4A-203ENST00000527154 C22orf42Q6IC83 251 aa11.41□□□□□ -0.58
CHMP4A-203ENST00000527154 BEST4Q8NFU0 473 aa11.41□□□□□ -0.58
CHMP4A-203ENST00000527154 FCAMRQ8WWV6 532 aa11.41□□□□□ -0.58
CHMP4A-203ENST00000527154 NDUFB11Q9NX14 153 aa11.41□□□□□ -0.58
CHMP4A-203ENST00000527154 RFNGQ9Y644 331 aa11.41□□□□□ -0.58
CHMP4A-203ENST00000527154 TRDV1A0A1B0GX56 115 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms