RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 TMEM187Q14656 261 aa11.77□□□□□ -0.53
PTPRU-210ENST00000527027 UBE2NLQ5JXB2 153 aa11.77□□□□□ -0.53
PTPRU-210ENST00000527027 GBGT1Q8N5D6 347 aa11.77□□□□□ -0.53
PTPRU-210ENST00000527027 OR5H6Q8NGV6 325 aa11.77□□□□□ -0.53
PTPRU-210ENST00000527027 OR1P1Q8NH06 330 aa11.77□□□□□ -0.53
PTPRU-210ENST00000527027 MCFD2Q8NI22 146 aa11.77□□□□□ -0.53
PTPRU-210ENST00000527027 SLC25A38Q96DW6 304 aa11.77□□□□□ -0.53
PTPRU-210ENST00000527027 S100A16Q96FQ6 103 aaKnown RBP11.77□□□□□ -0.53
PTPRU-210ENST00000527027 AUNIPQ9H7T9 357 aa11.77□□□□□ -0.53
PTPRU-210ENST00000527027 DIABLOQ9NR28 239 aa11.77□□□□□ -0.53
PTPRU-210ENST00000527027 FKBP11Q9NYL4 201 aa11.77□□□□□ -0.53
PTPRU-210ENST00000527027 RYR1P21817 5038 aa11.76□□□□□ -0.53
PTPRU-210ENST00000527027 PGLYRP1O75594 196 aaPredicted RBP11.76□□□□□ -0.53
PTPRU-210ENST00000527027 APOA1P02647 267 aa11.76□□□□□ -0.53
PTPRU-210ENST00000527027 RLN1P04808 185 aa11.76□□□□□ -0.53
PTPRU-210ENST00000527027 S100A5P33763 92 aa11.76□□□□□ -0.53
PTPRU-210ENST00000527027 CBX5P45973 191 aa11.76□□□□□ -0.53
PTPRU-210ENST00000527027 MFAP4P55083 255 aa11.76□□□□□ -0.53
PTPRU-210ENST00000527027 HERV-K104P61576 105 aa11.76□□□□□ -0.53
PTPRU-210ENST00000527027 LINC00299Q6ZSB3 139 aa11.76□□□□□ -0.53
PTPRU-210ENST00000527027 C15orf40Q8WUR7 153 aa11.76□□□□□ -0.53
PTPRU-210ENST00000527027 FCAMRQ8WWV6 532 aa11.76□□□□□ -0.53
PTPRU-210ENST00000527027 TXN2Q99757 166 aa11.76□□□□□ -0.53
PTPRU-210ENST00000527027 NXF2Q9GZY0 626 aaKnown RBP11.76□□□□□ -0.53
PTPRU-210ENST00000527027 COMMD3Q9UBI1 195 aa11.76□□□□□ -0.53
PTPRU-210ENST00000527027 PRNDQ9UKY0 176 aa11.76□□□□□ -0.53
PTPRU-210ENST00000527027 IGHV3OR16-13A0A075B7E8 117 aa11.75□□□□□ -0.53
PTPRU-210ENST00000527027 IGHV3-74A0A0B4J1X5 117 aa11.75□□□□□ -0.53
PTPRU-210ENST00000527027 IGLL5B9A064 214 aa11.75□□□□□ -0.53
PTPRU-210ENST00000527027 C11orf94C9JXX5 98 aa11.75□□□□□ -0.53
PTPRU-210ENST00000527027 CD5P06127 495 aa11.75□□□□□ -0.53
PTPRU-210ENST00000527027 G6PCP35575 357 aa11.75□□□□□ -0.53
PTPRU-210ENST00000527027 DHRS11Q6UWP2 260 aa11.75□□□□□ -0.53
PTPRU-210ENST00000527027 TCF24Q7RTU0 167 aa11.75□□□□□ -0.53
PTPRU-210ENST00000527027 SAMD12Q8N8I0 201 aa11.75□□□□□ -0.53
PTPRU-210ENST00000527027 SLIRPQ9GZT3 109 aaKnown RBP11.75□□□□□ -0.53
PTPRU-210ENST00000527027 C15orf61A6NNL5 157 aa11.74□□□□□ -0.53
PTPRU-210ENST00000527027 I3L2K1 104 aa11.74□□□□□ -0.53
PTPRU-210ENST00000527027 RGS5O15539 181 aa11.74□□□□□ -0.53
PTPRU-210ENST00000527027 DFFBO76075 338 aa11.74□□□□□ -0.53
PTPRU-210ENST00000527027 MISP3Q96FF7 219 aa11.74□□□□□ -0.53
PTPRU-210ENST00000527027 TSC22D3Q99576 134 aa11.74□□□□□ -0.53
PTPRU-210ENST00000527027 HRH4Q9H3N8 390 aa11.74□□□□□ -0.53
PTPRU-210ENST00000527027 TMEM14BQ9NUH8 114 aa11.74□□□□□ -0.53
PTPRU-210ENST00000527027 EHFQ9NZC4 300 aa11.74□□□□□ -0.53
PTPRU-210ENST00000527027 PTTG2Q9NZH5 202 aa11.74□□□□□ -0.53
PTPRU-210ENST00000527027 MEIS3P1A6NDR6 274 aa11.73□□□□□ -0.53
PTPRU-210ENST00000527027 DBX1A6NMT0 343 aa11.73□□□□□ -0.53
PTPRU-210ENST00000527027 FAM25AB3EWG3 89 aa11.73□□□□□ -0.53
PTPRU-210ENST00000527027 FAM25CB3EWG5 89 aa11.73□□□□□ -0.53
PTPRU-210ENST00000527027 FAM25GB3EWG6 89 aa11.73□□□□□ -0.53
PTPRU-210ENST00000527027 DNASE2O00115 360 aaPredicted RBP11.73□□□□□ -0.53
PTPRU-210ENST00000527027 EIF4EP06730 217 aaKnown RBP11.73□□□□□ -0.53
PTPRU-210ENST00000527027 RFX2P48378 723 aa11.73□□□□□ -0.53
PTPRU-210ENST00000527027 DEFB131AP59861 70 aa11.73□□□□□ -0.53
PTPRU-210ENST00000527027 CNPY1Q3B7I2 92 aa11.73□□□□□ -0.53
PTPRU-210ENST00000527027 CMTM1Q8IZ96 169 aa11.73□□□□□ -0.53
PTPRU-210ENST00000527027 MOB3AQ96BX8 217 aa11.73□□□□□ -0.53
PTPRU-210ENST00000527027 GINS3Q9BRX5 216 aa11.73□□□□□ -0.53
PTPRU-210ENST00000527027 MS4A6AQ9H2W1 248 aa11.73□□□□□ -0.53
PTPRU-210ENST00000527027 MT-CO2P00403 227 aa11.72□□□□□ -0.53
PTPRU-210ENST00000527027 LEMD1Q68G75 181 aa11.72□□□□□ -0.53
PTPRU-210ENST00000527027 LINC00336Q6ZUF6 198 aa11.72□□□□□ -0.53
PTPRU-210ENST00000527027 LILRB2Q8N423 598 aa11.72□□□□□ -0.53
PTPRU-210ENST00000527027 Q8NAQ8 132 aa11.72□□□□□ -0.53
PTPRU-210ENST00000527027 ST8SIA2Q92186 375 aa11.72□□□□□ -0.53
PTPRU-210ENST00000527027 ZNF2Q9BSG1 426 aaPredicted RBP11.72□□□□□ -0.53
PTPRU-210ENST00000527027 VSIRQ9H7M9 311 aa11.72□□□□□ -0.53
PTPRU-210ENST00000527027 IFT46Q9NQC8 304 aa11.72□□□□□ -0.53
PTPRU-210ENST00000527027 TRAV2A0A0B4J234 112 aa11.71□□□□□ -0.53
PTPRU-210ENST00000527027 ST8SIA3O43173 380 aa11.71□□□□□ -0.53
PTPRU-210ENST00000527027 XRCC3O43542 346 aa11.71□□□□□ -0.53
PTPRU-210ENST00000527027 GNG7O60262 68 aa11.71□□□□□ -0.53
PTPRU-210ENST00000527027 IGHV3-48P01763 117 aa11.71□□□□□ -0.53
PTPRU-210ENST00000527027 TOMM20LQ6UXN7 152 aa11.71□□□□□ -0.53
PTPRU-210ENST00000527027 DUSP18Q8NEJ0 188 aa11.71□□□□□ -0.53
PTPRU-210ENST00000527027 FAT2Q9NYQ8 4349 aa11.7□□□□□ -0.54
PTPRU-210ENST00000527027 GPR31O00270 319 aa11.7□□□□□ -0.54
PTPRU-210ENST00000527027 HPGDSO60760 199 aa11.7□□□□□ -0.54
PTPRU-210ENST00000527027 PMP2P02689 132 aa11.7□□□□□ -0.54
PTPRU-210ENST00000527027 APOHP02749 345 aaPredicted RBP11.7□□□□□ -0.54
PTPRU-210ENST00000527027 RBMY1A1P0DJD3 496 aaKnown RBP11.7□□□□□ -0.54
PTPRU-210ENST00000527027 RBMY1CP0DJD4 496 aa11.7□□□□□ -0.54
PTPRU-210ENST00000527027 HLA-DMBP28068 263 aa11.7□□□□□ -0.54
PTPRU-210ENST00000527027 RPL11P62913 178 aaKnown RBP11.7□□□□□ -0.54
PTPRU-210ENST00000527027 RBMY1FQ15415 496 aaKnown RBP11.7□□□□□ -0.54
PTPRU-210ENST00000527027 TMEM69Q5SWH9 247 aa11.7□□□□□ -0.54
PTPRU-210ENST00000527027 STHQ8IWL8 128 aa11.7□□□□□ -0.54
PTPRU-210ENST00000527027 ZNF114Q8NC26 417 aa11.7□□□□□ -0.54
PTPRU-210ENST00000527027 DIRAS2Q96HU8 199 aa11.7□□□□□ -0.54
PTPRU-210ENST00000527027 DNAH17Q9UFH2 4485 aa11.7□□□□□ -0.54
PTPRU-210ENST00000527027 TRAV10A0A0B4J240 114 aa11.69□□□□□ -0.54
PTPRU-210ENST00000527027 IGHV4-28A0A0C4DH34 117 aa11.69□□□□□ -0.54
PTPRU-210ENST00000527027 CTDSP2O14595 271 aa11.69□□□□□ -0.54
PTPRU-210ENST00000527027 GIG44P09565 113 aaPredicted RBP11.69□□□□□ -0.54
PTPRU-210ENST00000527027 ELK1P19419 428 aa11.69□□□□□ -0.54
PTPRU-210ENST00000527027 NPBWR1P48145 328 aa11.69□□□□□ -0.54
PTPRU-210ENST00000527027 MRPS10P82664 201 aaKnown RBP11.69□□□□□ -0.54
PTPRU-210ENST00000527027 TMEM41BQ5BJD5 291 aa11.69□□□□□ -0.54
PTPRU-210ENST00000527027 CENPSQ8N2Z9 138 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 542.6 ms