RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 PRR13Q9NZ81 148 aa10.08□□□□□ -0.8
USH1C-203ENST00000526181 MRPL27Q9P0M9 148 aaKnown RBP10.08□□□□□ -0.8
USH1C-203ENST00000526181 RSL24D1Q9UHA3 163 aaKnown RBP10.08□□□□□ -0.8
USH1C-203ENST00000526181 GPR132Q9UNW8 380 aa10.08□□□□□ -0.8
USH1C-203ENST00000526181 CRYM-AS1A6NIL9 109 aa10.07□□□□□ -0.8
USH1C-203ENST00000526181 OR11H12B2RN74 326 aa10.07□□□□□ -0.8
USH1C-203ENST00000526181 NDUFA4O00483 81 aa10.07□□□□□ -0.8
USH1C-203ENST00000526181 ATG12O94817 140 aa10.07□□□□□ -0.8
USH1C-203ENST00000526181 CDS2O95674 445 aa10.07□□□□□ -0.8
USH1C-203ENST00000526181 IFNA17P01571 189 aa10.07□□□□□ -0.8
USH1C-203ENST00000526181 ETV6P41212 452 aa10.07□□□□□ -0.8
USH1C-203ENST00000526181 ELLP55199 621 aaPredicted RBP10.07□□□□□ -0.8
USH1C-203ENST00000526181 ERHP84090 104 aaKnown RBP10.07□□□□□ -0.8
USH1C-203ENST00000526181 SPSB3Q6PJ21 355 aa10.07□□□□□ -0.8
USH1C-203ENST00000526181 RNASE11Q8TAA1 199 aaKnown RBP10.07□□□□□ -0.8
USH1C-203ENST00000526181 GLYATL2Q8WU03 294 aa10.07□□□□□ -0.8
USH1C-203ENST00000526181 MARC2Q969Z3 335 aa10.07□□□□□ -0.8
USH1C-203ENST00000526181 TMEM230Q96A57 120 aa10.07□□□□□ -0.8
USH1C-203ENST00000526181 ATP6V0BQ99437 205 aa10.07□□□□□ -0.8
USH1C-203ENST00000526181 PRRT1Q99946 306 aa10.07□□□□□ -0.8
USH1C-203ENST00000526181 RBM38Q9H0Z9 239 aaKnown RBP10.07□□□□□ -0.8
USH1C-203ENST00000526181 SRD5A3Q9H8P0 318 aa10.07□□□□□ -0.8
USH1C-203ENST00000526181 DAZ1Q9NQZ3 744 aaKnown RBP10.07□□□□□ -0.8
USH1C-203ENST00000526181 RABL2AQ9UBK7 228 aaPredicted RBP10.07□□□□□ -0.8
USH1C-203ENST00000526181 RABL2BQ9UNT1 228 aa10.07□□□□□ -0.8
USH1C-203ENST00000526181 V9GYH0 126 aa10.07□□□□□ -0.8
USH1C-203ENST00000526181 RBMY1BA6NDE4 496 aaKnown RBP10.06□□□□□ -0.8
USH1C-203ENST00000526181 RBMY1EA6NEQ0 496 aaKnown RBP10.06□□□□□ -0.8
USH1C-203ENST00000526181 B3GALNT1O75752 331 aa10.06□□□□□ -0.8
USH1C-203ENST00000526181 RBMY1DP0C7P1 496 aaKnown RBP10.06□□□□□ -0.8
USH1C-203ENST00000526181 HOXA1P49639 335 aaPredicted RBP10.06□□□□□ -0.8
USH1C-203ENST00000526181 SELENOHQ8IZQ5 122 aaKnown RBP10.06□□□□□ -0.8
USH1C-203ENST00000526181 OR52B4Q8NGK2 314 aa10.06□□□□□ -0.8
USH1C-203ENST00000526181 RRNAD1Q96FB5 475 aaKnown RBP10.06□□□□□ -0.8
USH1C-203ENST00000526181 SPATA25Q9BR10 227 aa10.06□□□□□ -0.8
USH1C-203ENST00000526181 PDCD10Q9BUL8 212 aa10.06□□□□□ -0.8
USH1C-203ENST00000526181 MCUBQ9NWR8 336 aa10.06□□□□□ -0.8
USH1C-203ENST00000526181 RYR3Q15413 4870 aa10.06□□□□□ -0.8
USH1C-203ENST00000526181 INS-IGF2F8WCM5 200 aa10.05□□□□□ -0.8
USH1C-203ENST00000526181 RNASE2P10153 161 aaKnown RBP10.05□□□□□ -0.8
USH1C-203ENST00000526181 SNCAP37840 140 aa10.05□□□□□ -0.8
USH1C-203ENST00000526181 MFAP4P55083 255 aa10.05□□□□□ -0.8
USH1C-203ENST00000526181 TMEM268Q5VZI3 342 aa10.05□□□□□ -0.8
USH1C-203ENST00000526181 RBPMS2Q6ZRY4 209 aaKnown RBP10.05□□□□□ -0.8
USH1C-203ENST00000526181 SLC16A13Q7RTY0 426 aa10.05□□□□□ -0.8
USH1C-203ENST00000526181 MUC7Q8TAX7 377 aa10.05□□□□□ -0.8
USH1C-203ENST00000526181 RBPMSQ93062 196 aaKnown RBP10.05□□□□□ -0.8
USH1C-203ENST00000526181 TRIM63Q969Q1 353 aa10.05□□□□□ -0.8
USH1C-203ENST00000526181 GPR146Q96CH1 333 aa10.05□□□□□ -0.8
USH1C-203ENST00000526181 FAM110AQ9BQ89 295 aa10.05□□□□□ -0.8
USH1C-203ENST00000526181 IGHV3-49A0A0A0MS15 119 aa10.04□□□□□ -0.8
USH1C-203ENST00000526181 NUPL2O15504 423 aaKnown RBP10.04□□□□□ -0.8
USH1C-203ENST00000526181 YIF1AO95070 293 aa10.04□□□□□ -0.8
USH1C-203ENST00000526181 NXPH3O95157 252 aa10.04□□□□□ -0.8
USH1C-203ENST00000526181 FCGR2BP31994 310 aaPredicted RBP10.04□□□□□ -0.8
USH1C-203ENST00000526181 DHODHQ02127 395 aa10.04□□□□□ -0.8
USH1C-203ENST00000526181 KLF9Q13886 244 aaPredicted RBP10.04□□□□□ -0.8
USH1C-203ENST00000526181 ZNF79Q15937 498 aa10.04□□□□□ -0.8
USH1C-203ENST00000526181 PYDC2Q56P42 97 aa10.04□□□□□ -0.8
USH1C-203ENST00000526181 PVRIGQ6DKI7 326 aa10.04□□□□□ -0.8
USH1C-203ENST00000526181 CITED4Q96RK1 184 aa10.04□□□□□ -0.8
USH1C-203ENST00000526181 TXN2Q99757 166 aa10.04□□□□□ -0.8
USH1C-203ENST00000526181 EDA2RQ9HAV5 297 aa10.04□□□□□ -0.8
USH1C-203ENST00000526181 MRPL36Q9P0J6 103 aaKnown RBP10.04□□□□□ -0.8
USH1C-203ENST00000526181 CACNG5Q9UF02 275 aa10.04□□□□□ -0.8
USH1C-203ENST00000526181 SCP2D1Q9UJQ7 156 aa10.04□□□□□ -0.8
USH1C-203ENST00000526181 TRAV25A0A0B4J276 109 aa10.03□□□□□ -0.8
USH1C-203ENST00000526181 C15orf62A8K5M9 175 aa10.03□□□□□ -0.8
USH1C-203ENST00000526181 K7EMT4 169 aa10.03□□□□□ -0.8
USH1C-203ENST00000526181 GNG7O60262 68 aa10.03□□□□□ -0.8
USH1C-203ENST00000526181 AKR1C4P17516 323 aa10.03□□□□□ -0.8
USH1C-203ENST00000526181 SUPT4H1P63272 117 aaKnown RBP10.03□□□□□ -0.8
USH1C-203ENST00000526181 RELQ04864 619 aaPredicted RBP10.03□□□□□ -0.8
USH1C-203ENST00000526181 TMEM187Q14656 261 aa10.03□□□□□ -0.8
USH1C-203ENST00000526181 MLANAQ16655 118 aa10.03□□□□□ -0.8
USH1C-203ENST00000526181 AARDQ4LEZ3 155 aa10.03□□□□□ -0.8
USH1C-203ENST00000526181 FAM219AQ8IW50 185 aa10.03□□□□□ -0.8
USH1C-203ENST00000526181 HIPK2Q9H2X6 1198 aa10.03□□□□□ -0.8
USH1C-203ENST00000526181 FNDC4Q9H6D8 234 aaPredicted RBP10.03□□□□□ -0.8
USH1C-203ENST00000526181 ENY2Q9NPA8 101 aa10.03□□□□□ -0.8
USH1C-203ENST00000526181 GAR1Q9NY12 217 aaKnown RBP10.03□□□□□ -0.8
USH1C-203ENST00000526181 UBQLN2Q9UHD9 624 aa10.03□□□□□ -0.8
USH1C-203ENST00000526181 TMEM56-RWDD3S4R434 201 aa10.03□□□□□ -0.8
USH1C-203ENST00000526181 SORL1Q92673 2214 aa10.03□□□□□ -0.8
USH1C-203ENST00000526181 IGHV3OR16-13A0A075B7E8 117 aa10.02□□□□□ -0.81
USH1C-203ENST00000526181 IGHV3-74A0A0B4J1X5 117 aa10.02□□□□□ -0.81
USH1C-203ENST00000526181 IGHV7-4-1A0A0J9YVY3 117 aa10.02□□□□□ -0.81
USH1C-203ENST00000526181 C3orf84H3BNL1 204 aa10.02□□□□□ -0.81
USH1C-203ENST00000526181 TSPAN4O14817 238 aa10.02□□□□□ -0.81
USH1C-203ENST00000526181 SPCS3P61009 180 aa10.02□□□□□ -0.81
USH1C-203ENST00000526181 BSXQ3C1V8 233 aa10.02□□□□□ -0.81
USH1C-203ENST00000526181 CASC10Q5T4H9 136 aa10.02□□□□□ -0.81
USH1C-203ENST00000526181 DUSP18Q8NEJ0 188 aa10.02□□□□□ -0.81
USH1C-203ENST00000526181 OR10C1Q96KK4 312 aa10.02□□□□□ -0.81
USH1C-203ENST00000526181 RNF2Q99496 336 aa10.02□□□□□ -0.81
USH1C-203ENST00000526181 SPAG8Q99932 426 aaPredicted RBP10.02□□□□□ -0.81
USH1C-203ENST00000526181 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.02□□□□□ -0.81
USH1C-203ENST00000526181 SMPXQ9UHP9 88 aa10.02□□□□□ -0.81
USH1C-203ENST00000526181 CHEK1O14757 476 aa10.01□□□□□ -0.81
USH1C-203ENST00000526181 S100A5P33763 92 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms