RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 NAA60Q9H7X0 242 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 PLEKHA2Q9HB19 425 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 FBXL17Q9UF56 701 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 TBC1D24Q9ULP9 559 aa4.89□□□□□ -1.63
CD44-221ENST00000526000 KLK5Q9Y337 293 aaPredicted RBP4.89□□□□□ -1.63
CD44-221ENST00000526000 IGHV3-49A0A0A0MS15 119 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 TRAV3A0A0B4J244 114 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 TEX13DA0A0J9YY54 714 aaPredicted RBP4.88□□□□□ -1.63
CD44-221ENST00000526000 DUXBA0A1W2PPF3 345 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 NUPR2A6NF83 97 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 LGALS9O00182 355 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 PRAF2O60831 178 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 S1PR2O95136 353 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 TCRBP04435 133 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 RLN1P04808 185 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 SERPINE2P07093 398 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 NQO2P16083 231 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 UCP1P25874 307 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 PSMB6P28072 239 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 FCGR2BP31994 310 aaPredicted RBP4.88□□□□□ -1.63
CD44-221ENST00000526000 GPR183P32249 361 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 BTCP35070 178 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 NANOS2P60321 138 aaKnown RBP4.88□□□□□ -1.63
CD44-221ENST00000526000 ANKRD55Q3KP44 614 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 PHLDA2Q53GA4 152 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 PLET1Q6UQ28 207 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 TBC1D26Q86UD7 250 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 APRG1Q8IVJ8 170 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 FAM219AQ8IW50 185 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 SPAG16Q8N0X2 631 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 OR2C3Q8N628 320 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 STPG3Q8N7X2 389 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 OR4A5Q8NH83 315 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 MRGPRFQ96AM1 343 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 EEF1AKMT3Q96AZ1 226 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 OR2A7Q96R45 310 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 RTBDNQ9BSG5 229 aaPredicted RBP4.88□□□□□ -1.63
CD44-221ENST00000526000 C20orf24Q9BUV8 137 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 TMEM222Q9H0R3 208 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 ZNF257Q9Y2Q1 563 aa4.88□□□□□ -1.63
CD44-221ENST00000526000 A0A0B4J2A0 478 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 C3orf85A0A1B0GTC6 90 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 LINC00854A0A1B0GVQ3 168 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 CGB1A6NKQ9 187 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 CDS2O95674 445 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 DHFRP00374 187 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 IL5P05113 134 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 H2AFB2P0C5Z0 115 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 CTRB1P17538 263 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 BMI1P35226 326 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 MAS1LP35410 378 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 CCR6P51684 374 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 APOC4P55056 127 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 BRWD1-AS2P59051 145 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 ERVK-16P61578 105 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 PRR20EP86478 221 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 PRR20CP86479 221 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 PRR20DP86480 221 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 PRR20BP86481 221 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 PRR20AP86496 221 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 IFITM3Q01628 133 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 RGS21Q2M5E4 152 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 CTRB2Q6GPI1 263 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 THOC7Q6I9Y2 204 aaKnown RBP4.87□□□□□ -1.63
CD44-221ENST00000526000 SLC25A24Q6NUK1 477 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 WFDC3Q8IUB2 231 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 LGI3Q8N145 548 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 LRTM2Q8N967 370 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 OR10W1Q8NGF6 305 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 OR51H1Q8NH63 302 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 COQ8AQ8NI60 647 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 TMEM167AQ8TBQ9 72 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 RBPMSQ93062 196 aaKnown RBP4.87□□□□□ -1.63
CD44-221ENST00000526000 LSM10Q969L4 123 aaKnown RBP4.87□□□□□ -1.63
CD44-221ENST00000526000 TMEM56Q96MV1 263 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 MARVELD1Q9BSK0 173 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 HINT2Q9BX68 163 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 C20orf85Q9H1P6 137 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 FKBP11Q9NYL4 201 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 BET1LQ9NYM9 111 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 SHPKQ9UHJ6 478 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 TMEM56-RWDD3S4R434 201 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 ALMS1Q8TCU4 4167 aa4.87□□□□□ -1.63
CD44-221ENST00000526000 IGHV3OR16-13A0A075B7E8 117 aa4.86□□□□□ -1.63
CD44-221ENST00000526000 IGHV3-74A0A0B4J1X5 117 aa4.86□□□□□ -1.63
CD44-221ENST00000526000 OR2T8A6NH00 312 aa4.86□□□□□ -1.63
CD44-221ENST00000526000 MARCH11A6NNE9 402 aa4.86□□□□□ -1.63
CD44-221ENST00000526000 NPIPB5A8MRT5 1133 aa4.86□□□□□ -1.63
CD44-221ENST00000526000 KBTBD11O94819 623 aa4.86□□□□□ -1.63
CD44-221ENST00000526000 SFT2D2O95562 160 aa4.86□□□□□ -1.63
CD44-221ENST00000526000 OR4E1P0C645 316 aa4.86□□□□□ -1.63
CD44-221ENST00000526000 AKR1C4P17516 323 aa4.86□□□□□ -1.63
CD44-221ENST00000526000 LPAR6P43657 344 aa4.86□□□□□ -1.63
CD44-221ENST00000526000 RPL8P62917 257 aaKnown RBP4.86□□□□□ -1.63
CD44-221ENST00000526000 TMEM187Q14656 261 aa4.86□□□□□ -1.63
CD44-221ENST00000526000 FAM209BQ5JX69 171 aa4.86□□□□□ -1.63
CD44-221ENST00000526000 OR4A47Q6IF82 309 aa4.86□□□□□ -1.63
CD44-221ENST00000526000 Q6ZWC4 215 aa4.86□□□□□ -1.63
CD44-221ENST00000526000 NRARPQ7Z6K4 114 aa4.86□□□□□ -1.63
CD44-221ENST00000526000 TMED4Q7Z7H5 227 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms