RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 CTSDP07339 412 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-203ENST00000525013 MFAP4P55083 255 aa13.91□□□□□ -0.18
CAPN1-203ENST00000525013 RRNAD1Q96FB5 475 aaKnown RBP13.91□□□□□ -0.18
CAPN1-203ENST00000525013 C5orf66Q9H5L9 145 aa13.91□□□□□ -0.18
CAPN1-203ENST00000525013 I3L2K1 104 aa13.9□□□□□ -0.18
CAPN1-203ENST00000525013 ST8SIA3O43173 380 aa13.9□□□□□ -0.18
CAPN1-203ENST00000525013 MT-CO2P00403 227 aa13.9□□□□□ -0.18
CAPN1-203ENST00000525013 CTSGP08311 255 aa13.9□□□□□ -0.18
CAPN1-203ENST00000525013 AKAIN1P0CW23 69 aa13.9□□□□□ -0.18
CAPN1-203ENST00000525013 SNCAP37840 140 aa13.9□□□□□ -0.18
CAPN1-203ENST00000525013 RPL5P46777 297 aaKnown RBP13.9□□□□□ -0.18
CAPN1-203ENST00000525013 ZNF114Q8NC26 417 aa13.9□□□□□ -0.18
CAPN1-203ENST00000525013 FAM110AQ9BQ89 295 aa13.9□□□□□ -0.18
CAPN1-203ENST00000525013 PDCD10Q9BUL8 212 aa13.9□□□□□ -0.18
CAPN1-203ENST00000525013 HIPK2Q9H2X6 1198 aa13.9□□□□□ -0.18
CAPN1-203ENST00000525013 EDA2RQ9HAV5 297 aa13.9□□□□□ -0.18
CAPN1-203ENST00000525013 RABL2AQ9UBK7 228 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-203ENST00000525013 RABL2BQ9UNT1 228 aa13.9□□□□□ -0.18
CAPN1-203ENST00000525013 TEX13DA0A0J9YY54 714 aaPredicted RBP13.89□□□□□ -0.19
CAPN1-203ENST00000525013 YIF1AO95070 293 aa13.89□□□□□ -0.19
CAPN1-203ENST00000525013 P0C879 139 aa13.89□□□□□ -0.19
CAPN1-203ENST00000525013 UCP1P25874 307 aa13.89□□□□□ -0.19
CAPN1-203ENST00000525013 RELQ04864 619 aaPredicted RBP13.89□□□□□ -0.19
CAPN1-203ENST00000525013 ZFAND6Q6FIF0 208 aa13.89□□□□□ -0.19
CAPN1-203ENST00000525013 LAMTOR1Q6IAA8 161 aa13.89□□□□□ -0.19
CAPN1-203ENST00000525013 OR4C16Q8NGL9 310 aa13.89□□□□□ -0.19
CAPN1-203ENST00000525013 K7EMT4 169 aa13.88□□□□□ -0.19
CAPN1-203ENST00000525013 CTDSPLO15194 276 aa13.88□□□□□ -0.19
CAPN1-203ENST00000525013 B3GALNT1O75752 331 aa13.88□□□□□ -0.19
CAPN1-203ENST00000525013 OR5AC1P0C628 307 aa13.88□□□□□ -0.19
CAPN1-203ENST00000525013 ETV6P41212 452 aa13.88□□□□□ -0.19
CAPN1-203ENST00000525013 HOXA1P49639 335 aaPredicted RBP13.88□□□□□ -0.19
CAPN1-203ENST00000525013 TXN2Q99757 166 aa13.88□□□□□ -0.19
CAPN1-203ENST00000525013 RTBDNQ9BSG5 229 aaPredicted RBP13.88□□□□□ -0.19
CAPN1-203ENST00000525013 ENY2Q9NPA8 101 aa13.88□□□□□ -0.19
CAPN1-203ENST00000525013 TENM2Q9NT68 2774 aa13.88□□□□□ -0.19
CAPN1-203ENST00000525013 C15orf62A8K5M9 175 aa13.87□□□□□ -0.19
CAPN1-203ENST00000525013 H3BMQ9 156 aa13.87□□□□□ -0.19
CAPN1-203ENST00000525013 GNG7O60262 68 aa13.87□□□□□ -0.19
CAPN1-203ENST00000525013 SUB1P53999 127 aaKnown RBP eCLIP13.87□□□□□ -0.19
CAPN1-203ENST00000525013 SPAG8Q99932 426 aaPredicted RBP13.87□□□□□ -0.19
CAPN1-203ENST00000525013 PRRT1Q99946 306 aa13.87□□□□□ -0.19
CAPN1-203ENST00000525013 TMEM222Q9H0R3 208 aa13.87□□□□□ -0.19
CAPN1-203ENST00000525013 NAA60Q9H7X0 242 aa13.87□□□□□ -0.19
CAPN1-203ENST00000525013 RSL24D1Q9UHA3 163 aaKnown RBP13.87□□□□□ -0.19
CAPN1-203ENST00000525013 A0A0G2JRQ6 117 aa13.86□□□□□ -0.19
CAPN1-203ENST00000525013 TSPAN4O14817 238 aa13.86□□□□□ -0.19
CAPN1-203ENST00000525013 FCGR2BP31994 310 aaPredicted RBP13.86□□□□□ -0.19
CAPN1-203ENST00000525013 SURF2Q15527 256 aaPredicted RBP13.86□□□□□ -0.19
CAPN1-203ENST00000525013 DUSP18Q8NEJ0 188 aa13.86□□□□□ -0.19
CAPN1-203ENST00000525013 OR51S1Q8NGJ8 323 aa13.86□□□□□ -0.19
CAPN1-203ENST00000525013 MCFD2Q8NI22 146 aa13.86□□□□□ -0.19
CAPN1-203ENST00000525013 GGTLC1Q9BX51 225 aa13.86□□□□□ -0.19
CAPN1-203ENST00000525013 SLIRPQ9GZT3 109 aaKnown RBP13.86□□□□□ -0.19
CAPN1-203ENST00000525013 NXF2Q9GZY0 626 aaKnown RBP13.86□□□□□ -0.19
CAPN1-203ENST00000525013 UBQLN2Q9UHD9 624 aa13.86□□□□□ -0.19
CAPN1-203ENST00000525013 SMPXQ9UHP9 88 aa13.86□□□□□ -0.19
CAPN1-203ENST00000525013 IGHV3-49A0A0A0MS15 119 aa13.85□□□□□ -0.19
CAPN1-203ENST00000525013 FABP12A6NFH5 140 aa13.85□□□□□ -0.19
CAPN1-203ENST00000525013 CDS2O95674 445 aa13.85□□□□□ -0.19
CAPN1-203ENST00000525013 TNFSF8P32971 234 aa13.85□□□□□ -0.19
CAPN1-203ENST00000525013 NPBWR1P48145 328 aa13.85□□□□□ -0.19
CAPN1-203ENST00000525013 TMEM116Q8NCL8 245 aa13.85□□□□□ -0.19
CAPN1-203ENST00000525013 GLYATL2Q8WU03 294 aa13.85□□□□□ -0.19
CAPN1-203ENST00000525013 MCUBQ9NWR8 336 aa13.85□□□□□ -0.19
CAPN1-203ENST00000525013 GPR132Q9UNW8 380 aa13.85□□□□□ -0.19
CAPN1-203ENST00000525013 LOC102724200A0A096LPH7 203 aaPredicted RBP13.84□□□□□ -0.19
CAPN1-203ENST00000525013 IGHV7-4-1A0A0J9YVY3 117 aa13.84□□□□□ -0.19
CAPN1-203ENST00000525013 ANKRD20A5PA0PJZ0 165 aa13.84□□□□□ -0.19
CAPN1-203ENST00000525013 INS-IGF2F8WCM5 200 aa13.84□□□□□ -0.19
CAPN1-203ENST00000525013 GSTZ1O43708 216 aaPredicted RBP13.84□□□□□ -0.19
CAPN1-203ENST00000525013 DHODHQ02127 395 aa13.84□□□□□ -0.19
CAPN1-203ENST00000525013 Q6ZRM9 215 aa13.84□□□□□ -0.19
CAPN1-203ENST00000525013 FAM219AQ8IW50 185 aa13.84□□□□□ -0.19
CAPN1-203ENST00000525013 LHFPL5Q8TAF8 219 aa13.84□□□□□ -0.19
CAPN1-203ENST00000525013 RBPMSQ93062 196 aaKnown RBP13.84□□□□□ -0.19
CAPN1-203ENST00000525013 RHPN1-AS1Q9BWJ2 59 aa13.84□□□□□ -0.19
CAPN1-203ENST00000525013 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.84□□□□□ -0.19
CAPN1-203ENST00000525013 SCP2D1Q9UJQ7 156 aa13.84□□□□□ -0.19
CAPN1-203ENST00000525013 TRAV14DV4A0A0A6YYC5 116 aa13.83□□□□□ -0.2
CAPN1-203ENST00000525013 CCDC160A6NGH7 325 aa13.83□□□□□ -0.2
CAPN1-203ENST00000525013 OR4C46A6NHA9 309 aa13.83□□□□□ -0.2
CAPN1-203ENST00000525013 CRYM-AS1A6NIL9 109 aa13.83□□□□□ -0.2
CAPN1-203ENST00000525013 RNASE2P10153 161 aaKnown RBP13.83□□□□□ -0.2
CAPN1-203ENST00000525013 TMEM268Q5VZI3 342 aa13.83□□□□□ -0.2
CAPN1-203ENST00000525013 SELENOHQ8IZQ5 122 aaKnown RBP13.83□□□□□ -0.2
CAPN1-203ENST00000525013 ZNF414Q96IQ9 312 aa13.83□□□□□ -0.2
CAPN1-203ENST00000525013 RNF2Q99496 336 aa13.83□□□□□ -0.2
CAPN1-203ENST00000525013 RYR3Q15413 4870 aa13.82□□□□□ -0.2
CAPN1-203ENST00000525013 IGHV3OR16-13A0A075B7E8 117 aa13.82□□□□□ -0.2
CAPN1-203ENST00000525013 IGHV3-74A0A0B4J1X5 117 aa13.82□□□□□ -0.2
CAPN1-203ENST00000525013 CORTO00230 105 aa13.82□□□□□ -0.2
CAPN1-203ENST00000525013 CHEK1O14757 476 aa13.82□□□□□ -0.2
CAPN1-203ENST00000525013 SPCS3P61009 180 aa13.82□□□□□ -0.2
CAPN1-203ENST00000525013 TOMM20LQ6UXN7 152 aa13.82□□□□□ -0.2
CAPN1-203ENST00000525013 OR10C1Q96KK4 312 aa13.82□□□□□ -0.2
CAPN1-203ENST00000525013 SCGB3A2Q96PL1 93 aa13.82□□□□□ -0.2
CAPN1-203ENST00000525013 GINS3Q9BRX5 216 aa13.82□□□□□ -0.2
CAPN1-203ENST00000525013 CACNG5Q9UF02 275 aa13.82□□□□□ -0.2
CAPN1-203ENST00000525013 KCNIP3Q9Y2W7 256 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms