RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 TMEM204Q9BSN7 226 aa11.16□□□□□ -0.62
LDLRAD3-202ENST00000524419 CHODLQ9H9P2 273 aa11.16□□□□□ -0.62
LDLRAD3-202ENST00000524419 NDUFA4L2Q9NRX3 87 aa11.16□□□□□ -0.62
LDLRAD3-202ENST00000524419 A0A1W2PN81 502 aa11.15□□□□□ -0.62
LDLRAD3-202ENST00000524419 NDUFB4O95168 129 aa11.15□□□□□ -0.62
LDLRAD3-202ENST00000524419 ARL14EPLP0DKL9 152 aa11.15□□□□□ -0.62
LDLRAD3-202ENST00000524419 RNASE2P10153 161 aaKnown RBP11.15□□□□□ -0.62
LDLRAD3-202ENST00000524419 IGFBP2P18065 325 aa11.15□□□□□ -0.62
LDLRAD3-202ENST00000524419 CHRNA7P36544 502 aa11.15□□□□□ -0.62
LDLRAD3-202ENST00000524419 ERHP84090 104 aaKnown RBP11.15□□□□□ -0.62
LDLRAD3-202ENST00000524419 CDSNQ15517 529 aa11.15□□□□□ -0.62
LDLRAD3-202ENST00000524419 VMA21Q3ZAQ7 101 aa11.15□□□□□ -0.62
LDLRAD3-202ENST00000524419 ACTL10Q5JWF8 245 aa11.15□□□□□ -0.62
LDLRAD3-202ENST00000524419 PRRX1P54821 245 aa11.14□□□□□ -0.63
LDLRAD3-202ENST00000524419 C11orf42Q8N5U0 333 aa11.14□□□□□ -0.63
LDLRAD3-202ENST00000524419 OR10W1Q8NGF6 305 aa11.14□□□□□ -0.63
LDLRAD3-202ENST00000524419 SMG1Q96Q15 3661 aaKnown RBP11.14□□□□□ -0.63
LDLRAD3-202ENST00000524419 IGHV2-26A0A0B4J1V2 119 aa11.14□□□□□ -0.63
LDLRAD3-202ENST00000524419 INS-IGF2F8WCM5 200 aa11.14□□□□□ -0.63
LDLRAD3-202ENST00000524419 IGLV2-23P01705 113 aa11.14□□□□□ -0.63
LDLRAD3-202ENST00000524419 PDLIM4P50479 330 aa11.14□□□□□ -0.63
LDLRAD3-202ENST00000524419 FAM209BQ5JX69 171 aa11.14□□□□□ -0.63
LDLRAD3-202ENST00000524419 ZNF841Q6ZN19 808 aa11.14□□□□□ -0.63
LDLRAD3-202ENST00000524419 TMEM144Q7Z5S9 345 aa11.14□□□□□ -0.63
LDLRAD3-202ENST00000524419 LURAP1LQ8IV03 231 aa11.14□□□□□ -0.63
LDLRAD3-202ENST00000524419 RNASEH2CQ8TDP1 164 aaKnown RBP11.14□□□□□ -0.63
LDLRAD3-202ENST00000524419 RAB1BQ9H0U4 201 aa11.14□□□□□ -0.63
LDLRAD3-202ENST00000524419 BAHCC1Q9P281 2608 aa11.13□□□□□ -0.63
LDLRAD3-202ENST00000524419 XKRY2A2RUG3 117 aa11.13□□□□□ -0.63
LDLRAD3-202ENST00000524419 MT-CO2P00403 227 aa11.13□□□□□ -0.63
LDLRAD3-202ENST00000524419 RBP4P02753 201 aa11.13□□□□□ -0.63
LDLRAD3-202ENST00000524419 PRR20EP86478 221 aa11.13□□□□□ -0.63
LDLRAD3-202ENST00000524419 PRR20CP86479 221 aa11.13□□□□□ -0.63
LDLRAD3-202ENST00000524419 PRR20DP86480 221 aa11.13□□□□□ -0.63
LDLRAD3-202ENST00000524419 PRR20BP86481 221 aa11.13□□□□□ -0.63
LDLRAD3-202ENST00000524419 PRR20AP86496 221 aa11.13□□□□□ -0.63
LDLRAD3-202ENST00000524419 CDPF1Q6NVV7 123 aa11.13□□□□□ -0.63
LDLRAD3-202ENST00000524419 OR8B3Q8NGG8 313 aa11.13□□□□□ -0.63
LDLRAD3-202ENST00000524419 SLC35E1Q96K37 410 aa11.13□□□□□ -0.63
LDLRAD3-202ENST00000524419 OR8B2Q96RD0 313 aa11.13□□□□□ -0.63
LDLRAD3-202ENST00000524419 PRDM13Q9H4Q3 707 aa11.13□□□□□ -0.63
LDLRAD3-202ENST00000524419 ZNF430Q9H8G1 570 aaPredicted RBP11.13□□□□□ -0.63
LDLRAD3-202ENST00000524419 ZFYVE26Q68DK2 2539 aa11.13□□□□□ -0.63
LDLRAD3-202ENST00000524419 ENSAO43768 121 aaKnown RBP11.12□□□□□ -0.63
LDLRAD3-202ENST00000524419 GCHFRP30047 84 aa11.12□□□□□ -0.63
LDLRAD3-202ENST00000524419 CD69Q07108 199 aa11.12□□□□□ -0.63
LDLRAD3-202ENST00000524419 FOXL1Q12952 345 aa11.12□□□□□ -0.63
LDLRAD3-202ENST00000524419 OR5T1Q8NG75 326 aa11.12□□□□□ -0.63
LDLRAD3-202ENST00000524419 OR5R1Q8NH85 324 aa11.12□□□□□ -0.63
LDLRAD3-202ENST00000524419 CLEC7AQ9BXN2 247 aa11.12□□□□□ -0.63
LDLRAD3-202ENST00000524419 SLC45A2Q9UMX9 530 aa11.12□□□□□ -0.63
LDLRAD3-202ENST00000524419 PPIAL4CA0A0B4J2A2 164 aa11.12□□□□□ -0.63
LDLRAD3-202ENST00000524419 GATCO43716 136 aaKnown RBP11.12□□□□□ -0.63
LDLRAD3-202ENST00000524419 SLC25A17O43808 307 aa11.12□□□□□ -0.63
LDLRAD3-202ENST00000524419 PPIAL4GP0DN37 164 aa11.12□□□□□ -0.63
LDLRAD3-202ENST00000524419 LGALS7P47929 136 aa11.12□□□□□ -0.63
LDLRAD3-202ENST00000524419 SUB1P53999 127 aaKnown RBP eCLIP11.12□□□□□ -0.63
LDLRAD3-202ENST00000524419 GAMTQ14353 236 aa11.12□□□□□ -0.63
LDLRAD3-202ENST00000524419 CLEC12BQ2HXU8 276 aa11.12□□□□□ -0.63
LDLRAD3-202ENST00000524419 HLA-DRB5Q30154 266 aa11.12□□□□□ -0.63
LDLRAD3-202ENST00000524419 FAM78BQ5VT40 261 aa11.12□□□□□ -0.63
LDLRAD3-202ENST00000524419 DERL1Q9BUN8 251 aa11.12□□□□□ -0.63
LDLRAD3-202ENST00000524419 CBLN4Q9NTU7 201 aa11.12□□□□□ -0.63
LDLRAD3-202ENST00000524419 MDFIC2A0A1B0GVS7 189 aa11.11□□□□□ -0.63
LDLRAD3-202ENST00000524419 AMBPP02760 352 aa11.11□□□□□ -0.63
LDLRAD3-202ENST00000524419 LINC00869P0C866 280 aa11.11□□□□□ -0.63
LDLRAD3-202ENST00000524419 SFTPCP11686 197 aa11.11□□□□□ -0.63
LDLRAD3-202ENST00000524419 OR10J1P30954 320 aa11.11□□□□□ -0.63
LDLRAD3-202ENST00000524419 GPX4P36969 197 aaPredicted RBP11.11□□□□□ -0.63
LDLRAD3-202ENST00000524419 SPATA31B1PQ5VZV4 182 aa11.11□□□□□ -0.63
LDLRAD3-202ENST00000524419 MOB3BQ86TA1 216 aa11.11□□□□□ -0.63
LDLRAD3-202ENST00000524419 C8orf46Q8TAG6 207 aa11.11□□□□□ -0.63
LDLRAD3-202ENST00000524419 CACNG8Q8WXS5 425 aa11.11□□□□□ -0.63
LDLRAD3-202ENST00000524419 TIMD4Q96H15 378 aa11.11□□□□□ -0.63
LDLRAD3-202ENST00000524419 SFRP2Q96HF1 295 aa11.11□□□□□ -0.63
LDLRAD3-202ENST00000524419 FUT9Q9Y231 359 aa11.11□□□□□ -0.63
LDLRAD3-202ENST00000524419 AMMECR1Q9Y4X0 333 aaPredicted RBP11.11□□□□□ -0.63
LDLRAD3-202ENST00000524419 SCO2A0A1W2PP80 73 aa11.1□□□□□ -0.63
LDLRAD3-202ENST00000524419 IGLV1-47P01700 117 aa11.1□□□□□ -0.63
LDLRAD3-202ENST00000524419 JOSD1Q15040 202 aaPredicted RBP11.1□□□□□ -0.63
LDLRAD3-202ENST00000524419 C10orf55Q5SWW7 151 aa11.1□□□□□ -0.63
LDLRAD3-202ENST00000524419 ZNF114Q8NC26 417 aa11.1□□□□□ -0.63
LDLRAD3-202ENST00000524419 BEND2Q8NDZ0 799 aa11.1□□□□□ -0.63
LDLRAD3-202ENST00000524419 C11orf52Q96A22 123 aa11.1□□□□□ -0.63
LDLRAD3-202ENST00000524419 SEPSECSQ9HD40 501 aaKnown RBP11.1□□□□□ -0.63
LDLRAD3-202ENST00000524419 YTHDF2Q9Y5A9 579 aaKnown RBP11.1□□□□□ -0.63
LDLRAD3-202ENST00000524419 ARL2-SNX15V9GYD0 113 aa11.1□□□□□ -0.63
LDLRAD3-202ENST00000524419 IGHV3-72A0A0B4J1Y9 119 aa11.1□□□□□ -0.63
LDLRAD3-202ENST00000524419 AREGP15514 252 aa11.1□□□□□ -0.63
LDLRAD3-202ENST00000524419 COX7A1P24310 79 aa11.1□□□□□ -0.63
LDLRAD3-202ENST00000524419 RPL15P61313 204 aaKnown RBP11.1□□□□□ -0.63
LDLRAD3-202ENST00000524419 PKIAP61925 76 aa11.1□□□□□ -0.63
LDLRAD3-202ENST00000524419 MRPL41Q8IXM3 137 aaKnown RBP11.1□□□□□ -0.63
LDLRAD3-202ENST00000524419 TEX45Q8NA69 505 aa11.1□□□□□ -0.63
LDLRAD3-202ENST00000524419 TMEM37Q8WXS4 190 aa11.1□□□□□ -0.63
LDLRAD3-202ENST00000524419 TPSG1Q9NRR2 321 aa11.1□□□□□ -0.63
LDLRAD3-202ENST00000524419 ONECUT1Q9UBC0 465 aa11.1□□□□□ -0.63
LDLRAD3-202ENST00000524419 LY96Q9Y6Y9 160 aa11.1□□□□□ -0.63
LDLRAD3-202ENST00000524419 MALRD1Q5VYJ5 2156 aa11.09□□□□□ -0.63
LDLRAD3-202ENST00000524419 ZZEF1O43149 2961 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms