RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 FCN1O00602 326 aa5.3□□□□□ -1.56
SDC2-208ENST00000523877 SPRY3O43610 288 aa5.3□□□□□ -1.56
SDC2-208ENST00000523877 ZNF737O75373 536 aa5.3□□□□□ -1.56
SDC2-208ENST00000523877 ZNF688P0C7X2 276 aa5.3□□□□□ -1.56
SDC2-208ENST00000523877 ELK1P19419 428 aa5.3□□□□□ -1.56
SDC2-208ENST00000523877 VDAC1P21796 283 aa5.3□□□□□ -1.56
SDC2-208ENST00000523877 SLC25A1P53007 311 aa5.3□□□□□ -1.56
SDC2-208ENST00000523877 DAZ2Q13117 558 aaKnown RBP5.3□□□□□ -1.56
SDC2-208ENST00000523877 LAGE3Q14657 143 aa5.3□□□□□ -1.56
SDC2-208ENST00000523877 ANXA2RQ3ZCQ2 193 aa5.3□□□□□ -1.56
SDC2-208ENST00000523877 ZNF260Q3ZCT1 412 aa5.3□□□□□ -1.56
SDC2-208ENST00000523877 SCGB1D4Q6XE38 83 aa5.3□□□□□ -1.56
SDC2-208ENST00000523877 DAZ4Q86SG3 579 aaKnown RBP5.3□□□□□ -1.56
SDC2-208ENST00000523877 PRR15Q8IV56 129 aa5.3□□□□□ -1.56
SDC2-208ENST00000523877 OR52P1PQ8NH57 321 aa5.3□□□□□ -1.56
SDC2-208ENST00000523877 GEMIN6Q8WXD5 167 aaKnown RBP5.3□□□□□ -1.56
SDC2-208ENST00000523877 KLK6Q92876 244 aa5.3□□□□□ -1.56
SDC2-208ENST00000523877 IGF2BP2-AS1Q96M15 143 aa5.3□□□□□ -1.56
SDC2-208ENST00000523877 SCRT1Q9BWW7 348 aa5.3□□□□□ -1.56
SDC2-208ENST00000523877 IMUPQ9GZP8 106 aa5.3□□□□□ -1.56
SDC2-208ENST00000523877 CST11Q9H112 138 aa5.3□□□□□ -1.56
SDC2-208ENST00000523877 DAZ1Q9NQZ3 744 aaKnown RBP5.3□□□□□ -1.56
SDC2-208ENST00000523877 DAZ3Q9NR90 486 aaKnown RBP5.3□□□□□ -1.56
SDC2-208ENST00000523877 ZNF835Q9Y2P0 537 aa5.3□□□□□ -1.56
SDC2-208ENST00000523877 MON2Q7Z3U7 1717 aa5.3□□□□□ -1.56
SDC2-208ENST00000523877 HELZP42694 1942 aaKnown RBP5.3□□□□□ -1.56
SDC2-208ENST00000523877 TIAM2Q8IVF5 1701 aa5.29□□□□□ -1.56
SDC2-208ENST00000523877 TRAV8-2A0A0B4J237 113 aa5.29□□□□□ -1.56
SDC2-208ENST00000523877 GRIFINA4D1Z8 144 aa5.29□□□□□ -1.56
SDC2-208ENST00000523877 FAM24AA6NFZ4 105 aa5.29□□□□□ -1.56
SDC2-208ENST00000523877 ZAR1LA6NP61 321 aa5.29□□□□□ -1.56
SDC2-208ENST00000523877 JTBO76095 146 aa5.29□□□□□ -1.56
SDC2-208ENST00000523877 PTHLHP12272 177 aa5.29□□□□□ -1.56
SDC2-208ENST00000523877 CD59P13987 128 aa5.29□□□□□ -1.56
SDC2-208ENST00000523877 FKBP1AP62942 108 aaKnown RBP5.29□□□□□ -1.56
SDC2-208ENST00000523877 ECSCRQ19T08 205 aa5.29□□□□□ -1.56
SDC2-208ENST00000523877 ETDBQ3ZM63 59 aa5.29□□□□□ -1.56
SDC2-208ENST00000523877 FHL5Q5TD97 284 aa5.29□□□□□ -1.56
SDC2-208ENST00000523877 C22orf39Q6P5X5 142 aa5.29□□□□□ -1.56
SDC2-208ENST00000523877 TRAPPC6BQ86SZ2 158 aa5.29□□□□□ -1.56
SDC2-208ENST00000523877 BPIFA4PQ86YQ2 179 aa5.29□□□□□ -1.56
SDC2-208ENST00000523877 PAQR4Q8N4S7 273 aaPredicted RBP5.29□□□□□ -1.56
SDC2-208ENST00000523877 DCAF4L2Q8NA75 395 aa5.29□□□□□ -1.56
SDC2-208ENST00000523877 MRPL30Q8TCC3 161 aaKnown RBP5.29□□□□□ -1.56
SDC2-208ENST00000523877 AMELYQ99218 206 aa5.29□□□□□ -1.56
SDC2-208ENST00000523877 PRSS22Q9GZN4 317 aa5.29□□□□□ -1.56
SDC2-208ENST00000523877 AGPAT4-IT1Q9H0P7 198 aa5.29□□□□□ -1.56
SDC2-208ENST00000523877 PLEKHF2Q9H8W4 249 aa5.29□□□□□ -1.56
SDC2-208ENST00000523877 MANBALQ9NQG1 85 aa5.29□□□□□ -1.56
SDC2-208ENST00000523877 CYTL1Q9NRR1 136 aa5.29□□□□□ -1.56
SDC2-208ENST00000523877 PCTPQ9UKL6 214 aa5.29□□□□□ -1.56
SDC2-208ENST00000523877 LSM2Q9Y333 95 aaKnown RBP5.29□□□□□ -1.56
SDC2-208ENST00000523877 U3KQE9 123 aa5.29□□□□□ -1.56
SDC2-208ENST00000523877 TRPM7Q96QT4 1865 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 NUP205Q92621 2012 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 TRAV12-2A0A075B6T6 113 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 TRAV9-1A0A075B6T8 112 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 SMIM26A0A096LP01 95 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 TRAV8-4A0A0B4J246 113 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 LOC107986453A0A1B0GWG9 222 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 A1L4Q6 167 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 IZUMO1RA6ND01 250 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 OOSP1A8MZH6 123 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 LYPD3O95274 346 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 WISP1O95388 367 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 WNT1P04628 370 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 GNB2P62879 340 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 EBI3Q14213 229 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 KIR3DS1Q14943 382 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 DGAT2L6Q6ZPD8 337 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 ZNF493Q6ZR52 646 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 TMEM136Q6ZRR5 245 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 ZCCHC23Q6ZST2 131 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 TMEM179BQ7Z7N9 219 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 PIANPQ8IYJ0 282 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 LINC01356Q8N9X3 169 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 OR2T10Q8NGZ9 312 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 RPS4Y2Q8TD47 263 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 BRK1Q8WUW1 75 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 RBMXL1Q96E39 390 aaKnown RBP5.28□□□□□ -1.56
SDC2-208ENST00000523877 NRN1Q9NPD7 142 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 VSIG4Q9Y279 399 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 AMMECR1Q9Y4X0 333 aaPredicted RBP5.28□□□□□ -1.56
SDC2-208ENST00000523877 C4BP0C0L5 1744 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 COL11A2P13942 1736 aaPredicted RBP5.28□□□□□ -1.56
SDC2-208ENST00000523877 DOCK1Q14185 1865 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 NUP210Q8TEM1 1887 aaPredicted RBP5.28□□□□□ -1.56
SDC2-208ENST00000523877 KIF26AQ9ULI4 1882 aaPredicted RBP5.28□□□□□ -1.56
SDC2-208ENST00000523877 CUL9Q8IWT3 2517 aa5.28□□□□□ -1.56
SDC2-208ENST00000523877 AFDNP55196 1824 aaKnown RBP5.27□□□□□ -1.57
SDC2-208ENST00000523877 SIPA1L3O60292 1781 aaPredicted RBP5.27□□□□□ -1.57
SDC2-208ENST00000523877 DDTLA6NHG4 134 aaPredicted RBP5.27□□□□□ -1.57
SDC2-208ENST00000523877 OVOL3O00110 214 aa5.27□□□□□ -1.57
SDC2-208ENST00000523877 SOD1P00441 154 aa5.27□□□□□ -1.57
SDC2-208ENST00000523877 IGKV1D-16P01601 117 aa5.27□□□□□ -1.57
SDC2-208ENST00000523877 RBP4P02753 201 aa5.27□□□□□ -1.57
SDC2-208ENST00000523877 HLA-DPB1P04440 258 aa5.27□□□□□ -1.57
SDC2-208ENST00000523877 LGALS2P05162 132 aa5.27□□□□□ -1.57
SDC2-208ENST00000523877 SRP19P09132 144 aaKnown RBP5.27□□□□□ -1.57
SDC2-208ENST00000523877 SMIM13P0DJ93 91 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms