RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 IGKV1-6A0A0C4DH72 117 aa10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 A8MWL6 223 aa10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 ZNF207O43670 478 aaKnown RBP10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 OR10W1Q8NGF6 305 aa10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 GAFA1Q96PS6 74 aa10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 C19orf24Q9BVV8 132 aa10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 HSPB7Q9UBY9 170 aa10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 TRBV6-6A0A0A6YYG2 114 aa10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 TGIF2-C20orf24A0A0A6YYL0 155 aa10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 LINC00473A8K010 186 aa10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 TMEM250H0YL14 139 aa10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 ATP5G2Q06055 141 aa10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 LYPD2Q6UXB3 125 aa10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 WNT10AQ9GZT5 417 aa10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 FBXL7Q9UJT9 491 aa10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 SH2D7A6NKC9 451 aaPredicted RBP10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 RPL7P18124 248 aaKnown RBP10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 GOLT1AQ6ZVE7 132 aa10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 FAM169BQ8N8A8 192 aa10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 ARPC1AQ92747 370 aa10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 NBR2O15453 112 aa10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 TRGV3P03979 118 aa10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 SRP19P09132 144 aaKnown RBP10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 ATP5G3P48201 142 aa10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 PAFAH1B2P68402 229 aa10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 IQCJQ1A5X6 159 aa10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 TMEM78Q5T7P6 136 aa10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 MIR17HGQ75NE6 70 aa10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 WDR86Q86TI4 376 aa10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 VAMP8Q9BV40 100 aa10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 MRPL32Q9BYC8 188 aaKnown RBP10.8□□□□□ -0.68
PCDHGB1-201ENST00000523390 TMEM144Q7Z5S9 345 aa10.79□□□□□ -0.68
PCDHGB1-201ENST00000523390 CEACAM8P31997 349 aaPredicted RBP10.79□□□□□ -0.68
PCDHGB1-201ENST00000523390 C21orf62Q9NYP8 219 aa10.79□□□□□ -0.68
PCDHGB1-201ENST00000523390 RFNGQ9Y644 331 aa10.79□□□□□ -0.68
PCDHGB1-201ENST00000523390 TRAV3A0A0B4J244 114 aa10.79□□□□□ -0.68
PCDHGB1-201ENST00000523390 TRAV34A0A0B4J273 112 aa10.79□□□□□ -0.68
PCDHGB1-201ENST00000523390 A0A0G2JRQ6 117 aa10.79□□□□□ -0.68
PCDHGB1-201ENST00000523390 C1QTNF9BB2RNN3 333 aa10.79□□□□□ -0.68
PCDHGB1-201ENST00000523390 NBEAP1P0C6P0 100 aa10.79□□□□□ -0.68
PCDHGB1-201ENST00000523390 C1QTNF9P0C862 333 aa10.79□□□□□ -0.68
PCDHGB1-201ENST00000523390 IGHV1-8P0DP01 117 aa10.79□□□□□ -0.68
PCDHGB1-201ENST00000523390 COL8A2P25067 703 aa10.79□□□□□ -0.68
PCDHGB1-201ENST00000523390 GPR183P32249 361 aa10.79□□□□□ -0.68
PCDHGB1-201ENST00000523390 GCSAMLQ5JQS6 135 aa10.79□□□□□ -0.68
PCDHGB1-201ENST00000523390 ZNF738Q8NE65 137 aa10.79□□□□□ -0.68
PCDHGB1-201ENST00000523390 ISLRO14498 428 aa10.79□□□□□ -0.68
PCDHGB1-201ENST00000523390 KLRD1Q13241 179 aa10.79□□□□□ -0.68
PCDHGB1-201ENST00000523390 CACNG8Q8WXS5 425 aa10.79□□□□□ -0.68
PCDHGB1-201ENST00000523390 IGHV3-66A0A0C4DH42 116 aa10.78□□□□□ -0.68
PCDHGB1-201ENST00000523390 AGAP20933 346 aa10.78□□□□□ -0.68
PCDHGB1-201ENST00000523390 TMEM177Q53S58 311 aa10.78□□□□□ -0.68
PCDHGB1-201ENST00000523390 CENPWQ5EE01 88 aa10.78□□□□□ -0.68
PCDHGB1-201ENST00000523390 PACRGQ96M98 296 aaPredicted RBP10.78□□□□□ -0.68
PCDHGB1-201ENST00000523390 IGHV2-26A0A0B4J1V2 119 aa10.78□□□□□ -0.68
PCDHGB1-201ENST00000523390 HAX1O00165 279 aa10.78□□□□□ -0.68
PCDHGB1-201ENST00000523390 OR5AL1P0C617 328 aa10.78□□□□□ -0.68
PCDHGB1-201ENST00000523390 CCL20P78556 96 aa10.78□□□□□ -0.68
PCDHGB1-201ENST00000523390 M0R2Z0 102 aa10.78□□□□□ -0.68
PCDHGB1-201ENST00000523390 APCSP02743 223 aa10.78□□□□□ -0.68
PCDHGB1-201ENST00000523390 AMY1AP04745 511 aa10.78□□□□□ -0.68
PCDHGB1-201ENST00000523390 CD81P60033 236 aa10.78□□□□□ -0.68
PCDHGB1-201ENST00000523390 PRCDQ00LT1 54 aa10.78□□□□□ -0.68
PCDHGB1-201ENST00000523390 ICAM4Q14773 271 aa10.78□□□□□ -0.68
PCDHGB1-201ENST00000523390 FAM53AQ6NSI3 398 aaPredicted RBP10.78□□□□□ -0.68
PCDHGB1-201ENST00000523390 CYTL1Q9NRR1 136 aa10.78□□□□□ -0.68
PCDHGB1-201ENST00000523390 FGF16O43320 207 aa10.77□□□□□ -0.68
PCDHGB1-201ENST00000523390 MYOD1P15172 320 aa10.77□□□□□ -0.68
PCDHGB1-201ENST00000523390 NPPCP23582 126 aa10.77□□□□□ -0.68
PCDHGB1-201ENST00000523390 RNASEH2CQ8TDP1 164 aaKnown RBP10.77□□□□□ -0.68
PCDHGB1-201ENST00000523390 EEF1AKMT3Q96AZ1 226 aa10.77□□□□□ -0.68
PCDHGB1-201ENST00000523390 SLC25A33Q9BSK2 321 aa10.77□□□□□ -0.68
PCDHGB1-201ENST00000523390 A0A1W2PS18 150 aa10.77□□□□□ -0.69
PCDHGB1-201ENST00000523390 TM4SF20Q53R12 229 aa10.77□□□□□ -0.69
PCDHGB1-201ENST00000523390 Q6ZRM9 215 aa10.77□□□□□ -0.69
PCDHGB1-201ENST00000523390 Q6ZS49 121 aa10.77□□□□□ -0.69
PCDHGB1-201ENST00000523390 VSIRQ9H7M9 311 aa10.77□□□□□ -0.69
PCDHGB1-201ENST00000523390 CCDC168Q8NDH2 2452 aa10.77□□□□□ -0.69
PCDHGB1-201ENST00000523390 KIAA1549LQ6ZVL6 1849 aa10.77□□□□□ -0.69
PCDHGB1-201ENST00000523390 EFNA4P52798 201 aa10.77□□□□□ -0.69
PCDHGB1-201ENST00000523390 CLDND2Q8NHS1 167 aa10.77□□□□□ -0.69
PCDHGB1-201ENST00000523390 SPRY4Q9C004 299 aa10.77□□□□□ -0.69
PCDHGB1-201ENST00000523390 ZNRD1Q9P1U0 126 aa10.77□□□□□ -0.69
PCDHGB1-201ENST00000523390 WDR83OSQ9Y284 106 aa10.77□□□□□ -0.69
PCDHGB1-201ENST00000523390 DENND4AQ7Z401 1863 aa10.77□□□□□ -0.69
PCDHGB1-201ENST00000523390 SCO2A0A1W2PP80 73 aa10.77□□□□□ -0.69
PCDHGB1-201ENST00000523390 TMEM189A5PLL7 270 aa10.77□□□□□ -0.69
PCDHGB1-201ENST00000523390 ID1P41134 155 aa10.77□□□□□ -0.69
PCDHGB1-201ENST00000523390 SPANXN1Q5VSR9 72 aa10.77□□□□□ -0.69
PCDHGB1-201ENST00000523390 LIME1Q9H400 295 aa10.77□□□□□ -0.69
PCDHGB1-201ENST00000523390 FAM106AQ4KMX7 169 aa10.76□□□□□ -0.69
PCDHGB1-201ENST00000523390 RNF166Q96A37 237 aaPredicted RBP10.76□□□□□ -0.69
PCDHGB1-201ENST00000523390 TEX50A0A1B0GTY4 177 aa10.76□□□□□ -0.69
PCDHGB1-201ENST00000523390 IGHV3-11P01762 117 aa10.76□□□□□ -0.69
PCDHGB1-201ENST00000523390 CD69Q07108 199 aa10.76□□□□□ -0.69
PCDHGB1-201ENST00000523390 KIAA1644Q3SXP7 199 aa10.76□□□□□ -0.69
PCDHGB1-201ENST00000523390 CENPVQ7Z7K6 275 aaPredicted RBP10.76□□□□□ -0.69
PCDHGB1-201ENST00000523390 KLHDC1Q8N7A1 406 aa10.76□□□□□ -0.69
PCDHGB1-201ENST00000523390 MBNL3Q9NUK0 354 aaKnown RBP10.76□□□□□ -0.69
PCDHGB1-201ENST00000523390 TRAV40A0A0B4J280 105 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms