RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 HBG2P69892 147 aa10.29□□□□□ -0.76
CPNE3-205ENST00000522240 AKIRIN2Q53H80 203 aa10.29□□□□□ -0.76
CPNE3-205ENST00000522240 ASPHD1Q5U4P2 390 aa10.29□□□□□ -0.76
CPNE3-205ENST00000522240 PRIMA1Q86XR5 153 aa10.29□□□□□ -0.76
CPNE3-205ENST00000522240 OR1P1Q8NH06 330 aa10.29□□□□□ -0.76
CPNE3-205ENST00000522240 RNASEH2CQ8TDP1 164 aaKnown RBP10.29□□□□□ -0.76
CPNE3-205ENST00000522240 TMEM170AQ8WVE7 144 aa10.29□□□□□ -0.76
CPNE3-205ENST00000522240 PINX1Q96BK5 328 aaKnown RBP10.29□□□□□ -0.76
CPNE3-205ENST00000522240 P2RX4Q99571 388 aa10.29□□□□□ -0.76
CPNE3-205ENST00000522240 FAM103A1Q9BTL3 118 aaKnown RBP10.29□□□□□ -0.76
CPNE3-205ENST00000522240 PRSS22Q9GZN4 317 aa10.29□□□□□ -0.76
CPNE3-205ENST00000522240 ARL6Q9H0F7 186 aa10.29□□□□□ -0.76
CPNE3-205ENST00000522240 ESM1Q9NQ30 184 aa10.29□□□□□ -0.76
CPNE3-205ENST00000522240 TNFRSF19Q9NS68 423 aa10.29□□□□□ -0.76
CPNE3-205ENST00000522240 PLXNB1O43157 2135 aa10.28□□□□□ -0.76
CPNE3-205ENST00000522240 SH2D7A6NKC9 451 aaPredicted RBP10.28□□□□□ -0.76
CPNE3-205ENST00000522240 PRSS46E5RG02 174 aa10.28□□□□□ -0.76
CPNE3-205ENST00000522240 TRIM77I1YAP6 450 aa10.28□□□□□ -0.76
CPNE3-205ENST00000522240 AP4M1O00189 453 aa10.28□□□□□ -0.76
CPNE3-205ENST00000522240 CORTO00230 105 aa10.28□□□□□ -0.76
CPNE3-205ENST00000522240 TAAR5O14804 337 aa10.28□□□□□ -0.76
CPNE3-205ENST00000522240 CYB5BO43169 146 aa10.28□□□□□ -0.76
CPNE3-205ENST00000522240 BCL2L11O43521 198 aa10.28□□□□□ -0.76
CPNE3-205ENST00000522240 CST7O76096 145 aa10.28□□□□□ -0.76
CPNE3-205ENST00000522240 AP2S1P53680 142 aaPredicted RBP10.28□□□□□ -0.76
CPNE3-205ENST00000522240 BLCAPP62952 87 aa10.28□□□□□ -0.76
CPNE3-205ENST00000522240 SLC38A11Q08AI6 406 aa10.28□□□□□ -0.76
CPNE3-205ENST00000522240 C19orf54Q5BKX5 351 aa10.28□□□□□ -0.76
CPNE3-205ENST00000522240 C9orf152Q5JTZ5 239 aa10.28□□□□□ -0.76
CPNE3-205ENST00000522240 ETV3LQ6ZN32 361 aa10.28□□□□□ -0.76
CPNE3-205ENST00000522240 TMUB2Q71RG4 321 aa10.28□□□□□ -0.76
CPNE3-205ENST00000522240 Q8N2B8 174 aa10.28□□□□□ -0.76
CPNE3-205ENST00000522240 TTC9CQ8N5M4 171 aa10.28□□□□□ -0.76
CPNE3-205ENST00000522240 OR10P1Q8NGE3 313 aa10.28□□□□□ -0.76
CPNE3-205ENST00000522240 OR1S2Q8NGQ3 325 aa10.28□□□□□ -0.76
CPNE3-205ENST00000522240 FAM110DQ8TAY7 271 aaPredicted RBP10.28□□□□□ -0.76
CPNE3-205ENST00000522240 MDFIQ99750 246 aa10.28□□□□□ -0.76
CPNE3-205ENST00000522240 ARPC5LQ9BPX5 153 aa10.28□□□□□ -0.76
CPNE3-205ENST00000522240 FBXL17Q9UF56 701 aa10.28□□□□□ -0.76
CPNE3-205ENST00000522240 PAIP2BQ9ULR5 123 aaKnown RBP10.28□□□□□ -0.76
CPNE3-205ENST00000522240 KANTRA0A1W2PQU2 76 aa10.27□□□□□ -0.77
CPNE3-205ENST00000522240 FNDC10F2Z333 226 aa10.27□□□□□ -0.77
CPNE3-205ENST00000522240 IFNA4P05014 189 aa10.27□□□□□ -0.77
CPNE3-205ENST00000522240 REG1AP05451 166 aa10.27□□□□□ -0.77
CPNE3-205ENST00000522240 DLK1P80370 383 aa10.27□□□□□ -0.77
CPNE3-205ENST00000522240 NHLH2Q02577 135 aa10.27□□□□□ -0.77
CPNE3-205ENST00000522240 ATP6V1FQ16864 119 aa10.27□□□□□ -0.77
CPNE3-205ENST00000522240 ECSCRQ19T08 205 aa10.27□□□□□ -0.77
CPNE3-205ENST00000522240 KLK9Q2XQG4 91 aa10.27□□□□□ -0.77
CPNE3-205ENST00000522240 OR8G2PQ6IF36 304 aa10.27□□□□□ -0.77
CPNE3-205ENST00000522240 UNQ5815/PRO19632Q6UWF5 114 aa10.27□□□□□ -0.77
CPNE3-205ENST00000522240 HAPLN4Q86UW8 402 aa10.27□□□□□ -0.77
CPNE3-205ENST00000522240 LFNGQ8NES3 379 aa10.27□□□□□ -0.77
CPNE3-205ENST00000522240 OR5C1Q8NGR4 320 aa10.27□□□□□ -0.77
CPNE3-205ENST00000522240 GGACTQ9BVM4 153 aa10.27□□□□□ -0.77
CPNE3-205ENST00000522240 ZNF702PQ9H963 129 aa10.27□□□□□ -0.77
CPNE3-205ENST00000522240 KLK9Q9UKQ9 250 aa10.27□□□□□ -0.77
CPNE3-205ENST00000522240 TRAV41A0A0B4J266 112 aa10.26□□□□□ -0.77
CPNE3-205ENST00000522240 DFFBO76075 338 aa10.26□□□□□ -0.77
CPNE3-205ENST00000522240 APELAP0DMC3 54 aa10.26□□□□□ -0.77
CPNE3-205ENST00000522240 UBA52P62987 128 aaKnown RBP10.26□□□□□ -0.77
CPNE3-205ENST00000522240 ARL16Q0P5N6 197 aa10.26□□□□□ -0.77
CPNE3-205ENST00000522240 EXOSC2Q13868 293 aaKnown RBP10.26□□□□□ -0.77
CPNE3-205ENST00000522240 OPCMLQ14982 345 aa10.26□□□□□ -0.77
CPNE3-205ENST00000522240 LILRB2Q8N423 598 aa10.26□□□□□ -0.77
CPNE3-205ENST00000522240 BSCL2Q96G97 398 aaPredicted RBP10.26□□□□□ -0.77
CPNE3-205ENST00000522240 DUX5Q96PT3 197 aa10.26□□□□□ -0.77
CPNE3-205ENST00000522240 ATP5SQ99766 215 aa10.26□□□□□ -0.77
CPNE3-205ENST00000522240 TMEM147Q9BVK8 224 aa10.26□□□□□ -0.77
CPNE3-205ENST00000522240 IGLV11-55A0A075B6I3 123 aa10.25□□□□□ -0.77
CPNE3-205ENST00000522240 RPS10-NUDT3A0A1W2PQS6 291 aa10.25□□□□□ -0.77
CPNE3-205ENST00000522240 LINC01548A6NM66 108 aa10.25□□□□□ -0.77
CPNE3-205ENST00000522240 H3BUA1 57 aa10.25□□□□□ -0.77
CPNE3-205ENST00000522240 LCE2BO14633 110 aa10.25□□□□□ -0.77
CPNE3-205ENST00000522240 BRI3O95415 125 aa10.25□□□□□ -0.77
CPNE3-205ENST00000522240 DEFA4P12838 97 aa10.25□□□□□ -0.77
CPNE3-205ENST00000522240 HIST1H1BP16401 226 aaKnown RBP10.25□□□□□ -0.77
CPNE3-205ENST00000522240 MFAP2P55001 183 aa10.25□□□□□ -0.77
CPNE3-205ENST00000522240 ZNF266Q14584 549 aa10.25□□□□□ -0.77
CPNE3-205ENST00000522240 VWC2Q2TAL6 325 aa10.25□□□□□ -0.77
CPNE3-205ENST00000522240 Q6ZS46 218 aa10.25□□□□□ -0.77
CPNE3-205ENST00000522240 TMEM217Q8N7C4 229 aa10.25□□□□□ -0.77
CPNE3-205ENST00000522240 CACNG8Q8WXS5 425 aa10.25□□□□□ -0.77
CPNE3-205ENST00000522240 WNT10AQ9GZT5 417 aa10.25□□□□□ -0.77
CPNE3-205ENST00000522240 FAM181BA6NEQ2 426 aa10.24□□□□□ -0.77
CPNE3-205ENST00000522240 TCF21O43680 179 aa10.24□□□□□ -0.77
CPNE3-205ENST00000522240 GPX4P36969 197 aaPredicted RBP10.24□□□□□ -0.77
CPNE3-205ENST00000522240 EIF5AP63241 154 aaKnown RBP10.24□□□□□ -0.77
CPNE3-205ENST00000522240 CFHR3Q02985 330 aa10.24□□□□□ -0.77
CPNE3-205ENST00000522240 CD69Q07108 199 aa10.24□□□□□ -0.77
CPNE3-205ENST00000522240 CLINT1Q14677 625 aa10.24□□□□□ -0.77
CPNE3-205ENST00000522240 ETFRF1Q6IPR1 90 aa10.24□□□□□ -0.77
CPNE3-205ENST00000522240 C19orf35Q6ZS72 473 aa10.24□□□□□ -0.77
CPNE3-205ENST00000522240 SLC51BQ86UW2 128 aa10.24□□□□□ -0.77
CPNE3-205ENST00000522240 STOML3Q8TAV4 291 aa10.24□□□□□ -0.77
CPNE3-205ENST00000522240 FANCD2OSQ96PS1 177 aa10.24□□□□□ -0.77
CPNE3-205ENST00000522240 GON7Q9BXV9 100 aa10.24□□□□□ -0.77
CPNE3-205ENST00000522240 PARD6GQ9BYG4 376 aaPredicted RBP10.24□□□□□ -0.77
CPNE3-205ENST00000522240 SMIM3Q9BZL3 60 aa10.24□□□□□ -0.77
CPNE3-205ENST00000522240 UQCC1Q9NVA1 299 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms