RNA–Protein interactions for RNA: ENST00000520672.2

PCDHA2-202, Transcript of protocadherin alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHA2, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2-202ENST00000520672 OR1A1Q9P1Q5 309 aa11.46□□□□□ -0.57
PCDHA2-202ENST00000520672 USF3Q68DE3 2245 aa11.46□□□□□ -0.58
PCDHA2-202ENST00000520672 NPY1RP25929 384 aa11.46□□□□□ -0.58
PCDHA2-202ENST00000520672 HERV-K104P63124 156 aa11.46□□□□□ -0.58
PCDHA2-202ENST00000520672 RAB31Q13636 194 aa11.46□□□□□ -0.58
PCDHA2-202ENST00000520672 PRR31Q5SQ13 230 aa11.46□□□□□ -0.58
PCDHA2-202ENST00000520672 SCNM1Q9BWG6 230 aa11.46□□□□□ -0.58
PCDHA2-202ENST00000520672 GEMIN7Q9H840 131 aaKnown RBP11.46□□□□□ -0.58
PCDHA2-202ENST00000520672 TSSC4Q9Y5U2 329 aaPredicted RBP11.46□□□□□ -0.58
PCDHA2-202ENST00000520672 TEX48A0A1B0GUV7 120 aa11.45□□□□□ -0.58
PCDHA2-202ENST00000520672 H3BUT2 72 aa11.45□□□□□ -0.58
PCDHA2-202ENST00000520672 IGKV1-39P01597 117 aa11.45□□□□□ -0.58
PCDHA2-202ENST00000520672 IGKV1D-39P04432 117 aa11.45□□□□□ -0.58
PCDHA2-202ENST00000520672 SRIP30626 198 aa11.45□□□□□ -0.58
PCDHA2-202ENST00000520672 LTC4SQ16873 150 aa11.45□□□□□ -0.58
PCDHA2-202ENST00000520672 LRP5LA4QPB2 252 aa11.45□□□□□ -0.58
PCDHA2-202ENST00000520672 MLNRO43193 412 aa11.45□□□□□ -0.58
PCDHA2-202ENST00000520672 TUSC2O75896 110 aa11.45□□□□□ -0.58
PCDHA2-202ENST00000520672 FAM27E3Q08E93 113 aa11.45□□□□□ -0.58
PCDHA2-202ENST00000520672 LRRC75BQ2VPJ9 315 aa11.45□□□□□ -0.58
PCDHA2-202ENST00000520672 PCSK4Q6UW60 755 aa11.45□□□□□ -0.58
PCDHA2-202ENST00000520672 BHLHA15Q7RTS1 189 aaPredicted RBP11.45□□□□□ -0.58
PCDHA2-202ENST00000520672 RAB37Q96AX2 223 aa11.45□□□□□ -0.58
PCDHA2-202ENST00000520672 ATP23Q9Y6H3 246 aa11.45□□□□□ -0.58
PCDHA2-202ENST00000520672 C17orf112F2Z3M2 114 aa11.44□□□□□ -0.58
PCDHA2-202ENST00000520672 SSTR5P35346 364 aa11.44□□□□□ -0.58
PCDHA2-202ENST00000520672 HBG1P69891 147 aa11.44□□□□□ -0.58
PCDHA2-202ENST00000520672 HBG2P69892 147 aa11.44□□□□□ -0.58
PCDHA2-202ENST00000520672 MCRIP2Q9BUT9 160 aaKnown RBP11.44□□□□□ -0.58
PCDHA2-202ENST00000520672 KCNS2Q9ULS6 477 aa11.44□□□□□ -0.58
PCDHA2-202ENST00000520672 IGHV1-18A0A0C4DH31 117 aa11.44□□□□□ -0.58
PCDHA2-202ENST00000520672 KIR2DS1A0A191URI9 304 aa11.44□□□□□ -0.58
PCDHA2-202ENST00000520672 OR10J4P0C629 311 aa11.44□□□□□ -0.58
PCDHA2-202ENST00000520672 KIR2DS4P43632 304 aa11.44□□□□□ -0.58
PCDHA2-202ENST00000520672 ATP5G3P48201 142 aa11.44□□□□□ -0.58
PCDHA2-202ENST00000520672 SERF2P84101 59 aa11.44□□□□□ -0.58
PCDHA2-202ENST00000520672 Q0VG73 95 aa11.44□□□□□ -0.58
PCDHA2-202ENST00000520672 KIR2DS1Q14954 304 aa11.44□□□□□ -0.58
PCDHA2-202ENST00000520672 ZNF324BQ6AW86 544 aaPredicted RBP11.44□□□□□ -0.58
PCDHA2-202ENST00000520672 ZNF474Q6S9Z5 364 aaPredicted RBP11.44□□□□□ -0.58
PCDHA2-202ENST00000520672 QTRT1Q9BXR0 403 aaKnown RBP11.44□□□□□ -0.58
PCDHA2-202ENST00000520672 FAM215AQ9Y5M1 114 aa11.44□□□□□ -0.58
PCDHA2-202ENST00000520672 SPTBN1Q01082 2364 aaKnown RBP11.44□□□□□ -0.58
PCDHA2-202ENST00000520672 H0Y8G0 127 aa11.44□□□□□ -0.58
PCDHA2-202ENST00000520672 APOA2P02652 100 aa11.44□□□□□ -0.58
PCDHA2-202ENST00000520672 PMCHL1Q16048 86 aa11.44□□□□□ -0.58
PCDHA2-202ENST00000520672 BLNKQ8WV28 456 aa11.44□□□□□ -0.58
PCDHA2-202ENST00000520672 TAF15Q92804 592 aaKnown RBP eCLIP11.44□□□□□ -0.58
PCDHA2-202ENST00000520672 HIF1ANQ9NWT6 349 aa11.44□□□□□ -0.58
PCDHA2-202ENST00000520672 CEACAM4O75871 244 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 CNIH1O95406 144 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 IGKV1-5P01602 117 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 IGHV3-13P01766 116 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 IGHV3-7P01780 117 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 TCL1AP56279 114 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 HSD52Q0P140 79 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 GUSBP1Q15486 140 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 CCDC144NLQ6NUI1 221 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 ACSM6Q6P461 480 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 Q6ZS92 163 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 C22orf34Q6ZV56 151 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 TCF24Q7RTU0 167 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 KIR3DL3Q8N743 410 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 RFESDQ8TAC1 157 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 TSKUQ8WUA8 353 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 JMJD8Q96S16 334 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 PSMG3Q9BT73 122 aaPredicted RBP11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 C19orf24Q9BVV8 132 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 OR2W1Q9Y3N9 320 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 BSNQ9UPA5 3926 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 PSPNO60542 156 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 CLDN1O95832 211 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 IGKV3-15P01624 115 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 GNB1P62873 340 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 AESQ08117 197 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 FOXE3Q13461 319 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 EDDM3AQ14507 147 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 EBLN2Q6P2I7 272 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 Q6ZR03 302 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 SPATA12Q7Z6I5 190 aa11.43□□□□□ -0.58
PCDHA2-202ENST00000520672 VENTXO95231 258 aa11.42□□□□□ -0.58
PCDHA2-202ENST00000520672 SLC38A11Q08AI6 406 aa11.42□□□□□ -0.58
PCDHA2-202ENST00000520672 PRR30Q53SZ7 412 aaPredicted RBP11.42□□□□□ -0.58
PCDHA2-202ENST00000520672 C12orf54Q6X4T0 127 aa11.42□□□□□ -0.58
PCDHA2-202ENST00000520672 OR10G8Q8NGN5 311 aa11.42□□□□□ -0.58
PCDHA2-202ENST00000520672 METRNQ9UJH8 293 aa11.42□□□□□ -0.58
PCDHA2-202ENST00000520672 POLDIP2Q9Y2S7 368 aa11.42□□□□□ -0.58
PCDHA2-202ENST00000520672 KALRNO60229 2985 aa11.42□□□□□ -0.58
PCDHA2-202ENST00000520672 SPTAN1Q13813 2472 aaKnown RBP11.42□□□□□ -0.58
PCDHA2-202ENST00000520672 TRBV20OR9-2A0A075B6H5 130 aa11.42□□□□□ -0.58
PCDHA2-202ENST00000520672 A0A1B0GW15 77 aa11.42□□□□□ -0.58
PCDHA2-202ENST00000520672 CD5LO43866 347 aa11.42□□□□□ -0.58
PCDHA2-202ENST00000520672 COX5AP20674 150 aa11.42□□□□□ -0.58
PCDHA2-202ENST00000520672 MSMPQ1L6U9 139 aa11.42□□□□□ -0.58
PCDHA2-202ENST00000520672 ZNF718Q3SXZ3 478 aa11.42□□□□□ -0.58
PCDHA2-202ENST00000520672 SPRY3O43610 288 aa11.41□□□□□ -0.58
PCDHA2-202ENST00000520672 MGST1P10620 155 aaKnown RBP11.41□□□□□ -0.58
PCDHA2-202ENST00000520672 FAM201AQ5SY85 155 aa11.41□□□□□ -0.58
PCDHA2-202ENST00000520672 SPATA31B1PQ5VZV4 182 aa11.41□□□□□ -0.58
PCDHA2-202ENST00000520672 Q6P435 159 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms