RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 DLK1P80370 383 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 HOXA4Q00056 320 aaPredicted RBP4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 TMEM267Q0VDI3 215 aaPredicted RBP4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 ZNF266Q14584 549 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 ICAM4Q14773 271 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 VMA21Q3ZAQ7 101 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 ABCA11PQ4W5N1 156 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 AKR1C8PQ5T2L2 129 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 ZNF66Q6ZN08 573 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 TMEM183AQ8IXX5 376 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 ZNF645Q8N7E2 425 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 CCDC71LQ8N9Z2 235 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 OR4D5Q8NGN0 318 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 OR4S2Q8NH73 311 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 OR1L1Q8NH94 360 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 FAM213BQ8TBF2 198 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 ABHD5Q8WTS1 349 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 RTN4IP1Q8WWV3 396 aaPredicted RBP4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 FRZBQ92765 325 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 R3HDM4Q96D70 268 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 GNPNAT1Q96EK6 184 aaPredicted RBP4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 MISP3Q96FF7 219 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 FAM210BQ96KR6 192 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 PACRGQ96M98 296 aaPredicted RBP4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 HIST1H2BLQ99880 126 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 PYGO2Q9BRQ0 406 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 NIPSNAP3BQ9BS92 247 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 SLC25A33Q9BSK2 321 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 C19orf24Q9BVV8 132 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 OR2D2Q9H210 308 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 LIN7CQ9NUP9 197 aaKnown RBP4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 GAB2Q9UQC2 676 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 OR2W1Q9Y3N9 320 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 RNF114Q9Y508 228 aa4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 SETD2Q9BYW2 2564 aaPredicted RBP4.55□□□□□ -1.68
CTNNA1-220ENST00000520260 TGIF2-C20orf24A0A0A6YYL0 155 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 IGHV3-43A0A0B4J1X8 118 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 LOC102723971A0A1B0GUV8 181 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 TMEM89A2RUT3 159 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 ZNF727A8MUV8 499 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 M0QZ24 198 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 M0R1X1 148 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 SCGB2A1O75556 95 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 CDS2O95674 445 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 IGHV4-59P01825 116 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 TRGC2P03986 189 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 IGHV3-43DP0DP04 118 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 FABP4P15090 132 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 VDAC1P21796 283 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 COMPP49747 757 aaPredicted RBP4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 FHITP49789 147 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 SRPXP78539 464 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 CCL20P78556 96 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 EWSR1Q01844 656 aaKnown RBP eCLIP4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 PMS2P11Q13670 270 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 MMDQ15546 238 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 HAGHQ16775 308 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 GFI1BQ5VTD9 330 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 ZNF343Q6P1L6 599 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 TMEM182Q6ZP80 229 aaPredicted RBP4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 ZNF833PQ6ZTB9 187 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 TCF23Q7RTU1 214 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 RNF144BQ7Z419 303 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 LGI3Q8N145 548 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 FGFRL1Q8N441 504 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 C11orf42Q8N5U0 333 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 HSD17B11Q8NBQ5 300 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 OR52L2PQ8NGH6 319 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 OR2G3Q8NGZ4 309 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 SGMS2Q8NHU3 365 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 OSR1Q8TAX0 266 aaPredicted RBP4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 FLYWCH2Q96CP2 140 aaKnown RBP4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 ACY3Q96HD9 319 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 RARRES2Q99969 163 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 ZNF2Q9BSG1 426 aaPredicted RBP4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 PARP12Q9H0J9 701 aaKnown RBP4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 SH3BGRL3Q9H299 93 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 PRO1933Q9H354 126 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 C16orf95Q9H693 158 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 SRD5A3Q9H8P0 318 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 TNFRSF19Q9NS68 423 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 VAX2Q9UIW0 290 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 RCL1Q9Y2P8 373 aaKnown RBP4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 WSB1Q9Y6I7 421 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 JMJD1CQ15652 2540 aa4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 NIPBLQ6KC79 2804 aaeCLIP4.54□□□□□ -1.68
CTNNA1-220ENST00000520260 YLPM1P49750 1951 aaKnown RBP4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 ZANQ9Y493 2812 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 SAA2-SAA4A0A096LPE2 208 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 A0A1B0GU03 582 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 DUXBA0A1W2PPF3 345 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 A6NDX4 124 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 A6NJY4 79 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 NBR2O15453 112 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 GGCTO75223 188 aaKnown RBP4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 DFFBO76075 338 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 VENTXO95231 258 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 SCGB1D2O95969 90 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 PPYP01298 95 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 IGKV1D-33P01593 117 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms