RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 BPIFA4PQ86YQ2 179 aa1.2□□□□□ -2.22
NPM1-206ENST00000519955 NIPSNAP1Q9BPW8 284 aa1.2□□□□□ -2.22
NPM1-206ENST00000519955 GINS4Q9BRT9 223 aa1.2□□□□□ -2.22
NPM1-206ENST00000519955 TP73-AS1Q9UF72 201 aa1.2□□□□□ -2.22
NPM1-206ENST00000519955 C22orf24Q9Y442 160 aa1.2□□□□□ -2.22
NPM1-206ENST00000519955 SNAPC4Q5SXM2 1469 aa1.19□□□□□ -2.22
NPM1-206ENST00000519955 TGIF2-C20orf24A0A0A6YYL0 155 aa1.19□□□□□ -2.22
NPM1-206ENST00000519955 A0A0D9SG52 128 aa1.19□□□□□ -2.22
NPM1-206ENST00000519955 IFNA10P01566 189 aa1.19□□□□□ -2.22
NPM1-206ENST00000519955 CTSDP07339 412 aaPredicted RBP1.19□□□□□ -2.22
NPM1-206ENST00000519955 HIST1H1TP22492 207 aaPredicted RBP1.19□□□□□ -2.22
NPM1-206ENST00000519955 SULT1A1P50225 295 aa1.19□□□□□ -2.22
NPM1-206ENST00000519955 SPANXN5Q5MJ07 72 aa1.19□□□□□ -2.22
NPM1-206ENST00000519955 DPPA3Q6W0C5 159 aa1.19□□□□□ -2.22
NPM1-206ENST00000519955 MIR17HGQ75NE6 70 aa1.19□□□□□ -2.22
NPM1-206ENST00000519955 FAM19A2Q8N3H0 131 aa1.19□□□□□ -2.22
NPM1-206ENST00000519955 TOMM6Q96B49 74 aa1.19□□□□□ -2.22
NPM1-206ENST00000519955 SLC50A1Q9BRV3 221 aa1.19□□□□□ -2.22
NPM1-206ENST00000519955 TOPBP1Q92547 1522 aa1.19□□□□□ -2.22
NPM1-206ENST00000519955 ARFGEF3Q5TH69 2177 aa1.18□□□□□ -2.22
NPM1-206ENST00000519955 IGKV1D-42A0A075B6H8 117 aa1.18□□□□□ -2.22
NPM1-206ENST00000519955 A0A087WX48 190 aa1.18□□□□□ -2.22
NPM1-206ENST00000519955 COX6A1P12074 109 aa1.18□□□□□ -2.22
NPM1-206ENST00000519955 FKBP2P26885 142 aaKnown RBP1.18□□□□□ -2.22
NPM1-206ENST00000519955 BRS3P32247 399 aa1.18□□□□□ -2.22
NPM1-206ENST00000519955 PRB3Q04118 309 aaPredicted RBP1.18□□□□□ -2.22
NPM1-206ENST00000519955 PHF13Q86YI8 300 aaPredicted RBP1.18□□□□□ -2.22
NPM1-206ENST00000519955 TERB2Q8NHR7 220 aa1.18□□□□□ -2.22
NPM1-206ENST00000519955 MIXL1Q9H2W2 232 aa1.18□□□□□ -2.22
NPM1-206ENST00000519955 RIC1Q4ADV7 1423 aa1.17□□□□□ -2.22
NPM1-206ENST00000519955 DPRXA6NFQ7 191 aa1.17□□□□□ -2.22
NPM1-206ENST00000519955 FADS1O60427 444 aa1.17□□□□□ -2.22
NPM1-206ENST00000519955 AHSA1O95433 338 aa1.17□□□□□ -2.22
NPM1-206ENST00000519955 ACOT6Q3I5F7 207 aaPredicted RBP1.17□□□□□ -2.22
NPM1-206ENST00000519955 CLVS1Q8IUQ0 354 aaPredicted RBP1.17□□□□□ -2.22
NPM1-206ENST00000519955 ANKRD29Q8N6D5 301 aa1.17□□□□□ -2.22
NPM1-206ENST00000519955 OR4E2Q8NGC2 313 aa1.17□□□□□ -2.22
NPM1-206ENST00000519955 H1FXQ92522 213 aaKnown RBP1.17□□□□□ -2.22
NPM1-206ENST00000519955 PPP1R2P1Q96PQ5 205 aa1.17□□□□□ -2.22
NPM1-206ENST00000519955 C11orf68Q9H3H3 251 aaKnown RBP1.17□□□□□ -2.22
NPM1-206ENST00000519955 TMEM56-RWDD3S4R434 201 aa1.17□□□□□ -2.22
NPM1-206ENST00000519955 NUP155O75694 1391 aa1.17□□□□□ -2.22
NPM1-206ENST00000519955 TRAV9-1A0A075B6T8 112 aa1.16□□□□□ -2.22
NPM1-206ENST00000519955 SMIM23A6NLE4 172 aa1.16□□□□□ -2.22
NPM1-206ENST00000519955 GOLGA6L19H0YKK7 550 aa1.16□□□□□ -2.22
NPM1-206ENST00000519955 FAAHO00519 579 aa1.16□□□□□ -2.22
NPM1-206ENST00000519955 IFNA16P05015 189 aa1.16□□□□□ -2.22
NPM1-206ENST00000519955 CRYGAP11844 174 aa1.16□□□□□ -2.22
NPM1-206ENST00000519955 SPI1P17947 270 aa1.16□□□□□ -2.22
NPM1-206ENST00000519955 RPL5P46777 297 aaKnown RBP1.16□□□□□ -2.22
NPM1-206ENST00000519955 KCNJ8Q15842 424 aa1.16□□□□□ -2.22
NPM1-206ENST00000519955 IMPG1Q17R60 797 aa1.16□□□□□ -2.22
NPM1-206ENST00000519955 KHDC3LQ587J8 217 aa1.16□□□□□ -2.22
NPM1-206ENST00000519955 DNAJC9Q8WXX5 260 aa1.16□□□□□ -2.22
NPM1-206ENST00000519955 VPS29Q9UBQ0 182 aa1.16□□□□□ -2.22
NPM1-206ENST00000519955 CACNA1BQ00975 2339 aa1.15□□□□□ -2.23
NPM1-206ENST00000519955 IGKV1-9A0A0C4DH69 117 aa1.15□□□□□ -2.23
NPM1-206ENST00000519955 EXOC1LA0A1B0GW35 172 aa1.15□□□□□ -2.23
NPM1-206ENST00000519955 TCL1BO95988 128 aa1.15□□□□□ -2.23
NPM1-206ENST00000519955 ASAH2BP0C7U1 165 aa1.15□□□□□ -2.23
NPM1-206ENST00000519955 RHEBQ15382 184 aa1.15□□□□□ -2.23
NPM1-206ENST00000519955 SPOPLQ6IQ16 392 aa1.15□□□□□ -2.23
NPM1-206ENST00000519955 LINC00311Q8N616 119 aa1.15□□□□□ -2.23
NPM1-206ENST00000519955 OR5A1Q8NGJ0 315 aa1.15□□□□□ -2.23
NPM1-206ENST00000519955 DCUN1D1Q96GG9 259 aa1.15□□□□□ -2.23
NPM1-206ENST00000519955 SLC39A9Q9NUM3 307 aa1.15□□□□□ -2.23
NPM1-206ENST00000519955 PKIGQ9Y2B9 76 aa1.15□□□□□ -2.23
NPM1-206ENST00000519955 TECTAO75443 2155 aa1.15□□□□□ -2.23
NPM1-206ENST00000519955 POLEQ07864 2286 aa1.15□□□□□ -2.23
NPM1-206ENST00000519955 KIF13BQ9NQT8 1826 aa1.15□□□□□ -2.23
NPM1-206ENST00000519955 WRNQ14191 1432 aaPredicted RBP eCLIP1.15□□□□□ -2.23
NPM1-206ENST00000519955 COL4A5P29400 1685 aa1.14□□□□□ -2.23
NPM1-206ENST00000519955 MTUS2Q5JR59 1369 aa1.14□□□□□ -2.23
NPM1-206ENST00000519955 LOC110117498A0A087WWA1 95 aa1.14□□□□□ -2.23
NPM1-206ENST00000519955 PQLC2LA1A4F0 135 aa1.14□□□□□ -2.23
NPM1-206ENST00000519955 CHP2O43745 196 aa1.14□□□□□ -2.23
NPM1-206ENST00000519955 MIFP14174 115 aa1.14□□□□□ -2.23
NPM1-206ENST00000519955 PDE6HQ13956 83 aa1.14□□□□□ -2.23
NPM1-206ENST00000519955 PTRHD1Q6GMV3 140 aaKnown RBP1.14□□□□□ -2.23
NPM1-206ENST00000519955 TSPAN32Q96QS1 320 aa1.14□□□□□ -2.23
NPM1-206ENST00000519955 ULBP3Q9BZM4 244 aa1.14□□□□□ -2.23
NPM1-206ENST00000519955 MRPL27Q9P0M9 148 aaKnown RBP1.14□□□□□ -2.23
NPM1-206ENST00000519955 ERGIC3Q9Y282 383 aa1.14□□□□□ -2.23
NPM1-206ENST00000519955 ALPK2Q86TB3 2170 aa1.13□□□□□ -2.23
NPM1-206ENST00000519955 C2orf70A6NJV1 201 aa1.13□□□□□ -2.23
NPM1-206ENST00000519955 OR1I1O60431 355 aa1.13□□□□□ -2.23
NPM1-206ENST00000519955 HYPMO75409 117 aa1.13□□□□□ -2.23
NPM1-206ENST00000519955 CRYZL1O95825 349 aa1.13□□□□□ -2.23
NPM1-206ENST00000519955 SERPINA6P08185 405 aa1.13□□□□□ -2.23
NPM1-206ENST00000519955 RPS20P60866 119 aaKnown RBP1.13□□□□□ -2.23
NPM1-206ENST00000519955 OOSP2Q86WS3 158 aa1.13□□□□□ -2.23
NPM1-206ENST00000519955 HIST3H2BBQ8N257 126 aa1.13□□□□□ -2.23
NPM1-206ENST00000519955 SIGLECL1Q8N7X8 197 aa1.13□□□□□ -2.23
NPM1-206ENST00000519955 ARL5BQ96KC2 179 aa1.13□□□□□ -2.23
NPM1-206ENST00000519955 C20orf27Q9GZN8 174 aa1.13□□□□□ -2.23
NPM1-206ENST00000519955 ROS1P08922 2347 aa1.13□□□□□ -2.23
NPM1-206ENST00000519955 CCDC88AQ3V6T2 1871 aa1.13□□□□□ -2.23
NPM1-206ENST00000519955 TRBV6-7A0A0A0MS04 114 aa1.12□□□□□ -2.23
NPM1-206ENST00000519955 OR4C46A6NHA9 309 aa1.12□□□□□ -2.23
NPM1-206ENST00000519955 BUB1B-PAK6H3BSN5 160 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms