RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 AMBPP02760 352 aa9.76□□□□□ -0.85
SYNPO-204ENST00000519664 SELENOTP62341 195 aa9.76□□□□□ -0.85
SYNPO-204ENST00000519664 RPL23P62829 140 aaKnown RBP9.76□□□□□ -0.85
SYNPO-204ENST00000519664 MORN2Q502X0 79 aa9.76□□□□□ -0.85
SYNPO-204ENST00000519664 SSX8Q7RTT4 187 aa9.76□□□□□ -0.85
SYNPO-204ENST00000519664 TCF23Q7RTU1 214 aa9.76□□□□□ -0.85
SYNPO-204ENST00000519664 ZNF664Q8N3J9 261 aa9.76□□□□□ -0.85
SYNPO-204ENST00000519664 LRTM2Q8N967 370 aa9.76□□□□□ -0.85
SYNPO-204ENST00000519664 U3KQA8 63 aa9.76□□□□□ -0.85
SYNPO-204ENST00000519664 IGHV3-49A0A0A0MS15 119 aa9.76□□□□□ -0.85
SYNPO-204ENST00000519664 MUC21A0A0G2JKD1 596 aa9.76□□□□□ -0.85
SYNPO-204ENST00000519664 MUC21A0A140T8X8 626 aa9.76□□□□□ -0.85
SYNPO-204ENST00000519664 KIR2DL2P43627 348 aaPredicted RBP9.76□□□□□ -0.85
SYNPO-204ENST00000519664 MUC21Q5SSG8 566 aa9.76□□□□□ -0.85
SYNPO-204ENST00000519664 TMEM42Q69YG0 159 aa9.76□□□□□ -0.85
SYNPO-204ENST00000519664 ZNF788Q6ZQV5 615 aa9.76□□□□□ -0.85
SYNPO-204ENST00000519664 RPP25LQ8N5L8 163 aaKnown RBP9.76□□□□□ -0.85
SYNPO-204ENST00000519664 NCOR1P1Q9H4R4 102 aa9.76□□□□□ -0.85
SYNPO-204ENST00000519664 TMEM106BQ9NUM4 274 aa9.76□□□□□ -0.85
SYNPO-204ENST00000519664 DYSFO75923 2080 aa9.76□□□□□ -0.85
SYNPO-204ENST00000519664 A8MWL6 223 aa9.76□□□□□ -0.85
SYNPO-204ENST00000519664 TMEM177Q53S58 311 aa9.76□□□□□ -0.85
SYNPO-204ENST00000519664 NMSQ5H8A3 153 aa9.76□□□□□ -0.85
SYNPO-204ENST00000519664 PRR31Q5SQ13 230 aa9.76□□□□□ -0.85
SYNPO-204ENST00000519664 TECTAO75443 2155 aa9.75□□□□□ -0.85
SYNPO-204ENST00000519664 C1RLQ9NZP8 487 aa9.75□□□□□ -0.85
SYNPO-204ENST00000519664 C2CD3Q4AC94 2353 aa9.75□□□□□ -0.85
SYNPO-204ENST00000519664 ISLRO14498 428 aa9.75□□□□□ -0.85
SYNPO-204ENST00000519664 EREGO14944 169 aa9.75□□□□□ -0.85
SYNPO-204ENST00000519664 ANOS1P23352 680 aa9.75□□□□□ -0.85
SYNPO-204ENST00000519664 C10orf91Q5T1B1 145 aa9.75□□□□□ -0.85
SYNPO-204ENST00000519664 C1orf194Q5T5A4 169 aa9.75□□□□□ -0.85
SYNPO-204ENST00000519664 MRPL52Q86TS9 123 aaKnown RBP9.75□□□□□ -0.85
SYNPO-204ENST00000519664 KIR3DL3Q8N743 410 aa9.75□□□□□ -0.85
SYNPO-204ENST00000519664 ZFP30Q9Y2G7 519 aa9.75□□□□□ -0.85
SYNPO-204ENST00000519664 RNF115Q9Y4L5 304 aa9.75□□□□□ -0.85
SYNPO-204ENST00000519664 TNCP24821 2201 aa9.75□□□□□ -0.85
SYNPO-204ENST00000519664 IGHV3-23P01764 117 aa9.75□□□□□ -0.85
SYNPO-204ENST00000519664 CXCL1P09341 107 aa9.75□□□□□ -0.85
SYNPO-204ENST00000519664 MYOD1P15172 320 aa9.75□□□□□ -0.85
SYNPO-204ENST00000519664 TDGF1P3P51864 188 aa9.75□□□□□ -0.85
SYNPO-204ENST00000519664 C10orf55Q5SWW7 151 aa9.75□□□□□ -0.85
SYNPO-204ENST00000519664 GOLT1AQ6ZVE7 132 aa9.75□□□□□ -0.85
SYNPO-204ENST00000519664 LINC00305Q7Z4B0 112 aa9.75□□□□□ -0.85
SYNPO-204ENST00000519664 SMIM17P0DL12 118 aa9.75□□□□□ -0.85
SYNPO-204ENST00000519664 PLP1P60201 277 aa9.75□□□□□ -0.85
SYNPO-204ENST00000519664 ZNF146Q15072 292 aa9.75□□□□□ -0.85
SYNPO-204ENST00000519664 OR4A5Q8NH83 315 aa9.75□□□□□ -0.85
SYNPO-204ENST00000519664 NUDT11Q96G61 164 aa9.75□□□□□ -0.85
SYNPO-204ENST00000519664 TEX50A0A1B0GTY4 177 aa9.74□□□□□ -0.85
SYNPO-204ENST00000519664 DUTP33316 252 aaKnown RBP9.74□□□□□ -0.85
SYNPO-204ENST00000519664 NIT1Q86X76 327 aa9.74□□□□□ -0.85
SYNPO-204ENST00000519664 GBGT1Q8N5D6 347 aa9.74□□□□□ -0.85
SYNPO-204ENST00000519664 OR10W1Q8NGF6 305 aa9.74□□□□□ -0.85
SYNPO-204ENST00000519664 SNRNP40Q96DI7 357 aaKnown RBP9.74□□□□□ -0.85
SYNPO-204ENST00000519664 DIRC2Q96SL1 478 aa9.74□□□□□ -0.85
SYNPO-204ENST00000519664 CRIM1Q9NZV1 1036 aa9.74□□□□□ -0.85
SYNPO-204ENST00000519664 LAMTOR2Q9Y2Q5 125 aa9.74□□□□□ -0.85
SYNPO-204ENST00000519664 IGKV1-6A0A0C4DH72 117 aa9.74□□□□□ -0.85
SYNPO-204ENST00000519664 NDUFS8O00217 210 aa9.74□□□□□ -0.85
SYNPO-204ENST00000519664 RNF166Q96A37 237 aaPredicted RBP9.74□□□□□ -0.85
SYNPO-204ENST00000519664 TXNDC17Q9BRA2 123 aa9.74□□□□□ -0.85
SYNPO-204ENST00000519664 TRAV3A0A0B4J244 114 aa9.74□□□□□ -0.85
SYNPO-204ENST00000519664 SS18L1O75177 396 aaPredicted RBP9.74□□□□□ -0.85
SYNPO-204ENST00000519664 RELBQ01201 579 aa9.74□□□□□ -0.85
SYNPO-204ENST00000519664 SRSF12Q8WXF0 261 aaKnown RBP9.74□□□□□ -0.85
SYNPO-204ENST00000519664 KIF26AQ9ULI4 1882 aaPredicted RBP9.74□□□□□ -0.85
SYNPO-204ENST00000519664 MT-ND6P03923 174 aa9.73□□□□□ -0.85
SYNPO-204ENST00000519664 LCN2P80188 198 aa9.73□□□□□ -0.85
SYNPO-204ENST00000519664 Q5PR19 223 aa9.73□□□□□ -0.85
SYNPO-204ENST00000519664 SCNM1Q9BWG6 230 aa9.73□□□□□ -0.85
SYNPO-204ENST00000519664 RNASE7Q9H1E1 156 aaKnown RBP9.73□□□□□ -0.85
SYNPO-204ENST00000519664 HSPB7Q9UBY9 170 aa9.73□□□□□ -0.85
SYNPO-204ENST00000519664 ZNF503-AS2A6NEH8 195 aa9.73□□□□□ -0.85
SYNPO-204ENST00000519664 SAA1P0DJI8 122 aaPredicted RBP9.73□□□□□ -0.85
SYNPO-204ENST00000519664 RIGQ13278 110 aa9.73□□□□□ -0.85
SYNPO-204ENST00000519664 TMEM170AQ8WVE7 144 aa9.73□□□□□ -0.85
SYNPO-204ENST00000519664 TMEM50AO95807 157 aa9.73□□□□□ -0.85
SYNPO-204ENST00000519664 BPIFA4PQ86YQ2 179 aa9.73□□□□□ -0.85
SYNPO-204ENST00000519664 TMEM186Q96B77 213 aa9.73□□□□□ -0.85
SYNPO-204ENST00000519664 IFI27L2Q9H2X8 130 aa9.73□□□□□ -0.85
SYNPO-204ENST00000519664 RABAC1Q9UI14 185 aa9.73□□□□□ -0.85
SYNPO-204ENST00000519664 LINC00473A8K010 186 aa9.73□□□□□ -0.85
SYNPO-204ENST00000519664 C17orf100A8MU93 164 aa9.73□□□□□ -0.85
SYNPO-204ENST00000519664 IL4P05112 153 aa9.73□□□□□ -0.85
SYNPO-204ENST00000519664 TFPI2P48307 235 aa9.73□□□□□ -0.85
SYNPO-204ENST00000519664 FAM19A2Q8N3H0 131 aa9.73□□□□□ -0.85
SYNPO-204ENST00000519664 NUDT10Q8NFP7 164 aa9.73□□□□□ -0.85
SYNPO-204ENST00000519664 TRBV24-1A0A075B6N3 115 aa9.72□□□□□ -0.85
SYNPO-204ENST00000519664 GZMBP10144 247 aa9.72□□□□□ -0.85
SYNPO-204ENST00000519664 C1orf162Q8NEQ5 155 aaPredicted RBP9.72□□□□□ -0.85
SYNPO-204ENST00000519664 DERL1Q9BUN8 251 aa9.72□□□□□ -0.85
SYNPO-204ENST00000519664 CLEC7AQ9BXN2 247 aa9.72□□□□□ -0.85
SYNPO-204ENST00000519664 NBEAP1P0C6P0 100 aa9.72□□□□□ -0.85
SYNPO-204ENST00000519664 MST1LQ2TV78 715 aa9.72□□□□□ -0.85
SYNPO-204ENST00000519664 UNQ5815/PRO19632Q6UWF5 114 aa9.72□□□□□ -0.85
SYNPO-204ENST00000519664 FAM90A1Q86YD7 464 aa9.72□□□□□ -0.85
SYNPO-204ENST00000519664 MTURNQ8N3F0 131 aa9.72□□□□□ -0.85
SYNPO-204ENST00000519664 WNT10AQ9GZT5 417 aa9.72□□□□□ -0.85
SYNPO-204ENST00000519664 MLNRO43193 412 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms