RNA–Protein interactions for RNA: ENST00000518910.5

CTNNA1-211, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-211ENST00000518910 ZNF429Q86V71 674 aa9.41□□□□□ -0.9
CTNNA1-211ENST00000518910 SRSF8Q9BRL6 282 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-211ENST00000518910 GSKIPQ9P0R6 139 aa9.41□□□□□ -0.9
CTNNA1-211ENST00000518910 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-211ENST00000518910 CYB5BO43169 146 aa9.4□□□□□ -0.9
CTNNA1-211ENST00000518910 ZNF207O43670 478 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-211ENST00000518910 MT-CO2P00403 227 aa9.4□□□□□ -0.9
CTNNA1-211ENST00000518910 IFNA10P01566 189 aa9.4□□□□□ -0.9
CTNNA1-211ENST00000518910 CLEC3BP05452 202 aa9.4□□□□□ -0.9
CTNNA1-211ENST00000518910 RNASE2P10153 161 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-211ENST00000518910 DEFA1P59665 94 aa9.4□□□□□ -0.9
CTNNA1-211ENST00000518910 DEFA3P59666 94 aa9.4□□□□□ -0.9
CTNNA1-211ENST00000518910 TNFRSF9Q07011 255 aa9.4□□□□□ -0.9
CTNNA1-211ENST00000518910 SAMD5Q5TGI4 173 aa9.4□□□□□ -0.9
CTNNA1-211ENST00000518910 ACSM6Q6P461 480 aa9.4□□□□□ -0.9
CTNNA1-211ENST00000518910 HSD17B13Q7Z5P4 300 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-211ENST00000518910 SCARB1Q8WTV0 552 aa9.4□□□□□ -0.9
CTNNA1-211ENST00000518910 C5orf51A6NDU8 294 aa9.39□□□□□ -0.91
CTNNA1-211ENST00000518910 H3BP45 60 aa9.39□□□□□ -0.91
CTNNA1-211ENST00000518910 K7EIM0 57 aa9.39□□□□□ -0.91
CTNNA1-211ENST00000518910 WRBO00258 174 aa9.39□□□□□ -0.91
CTNNA1-211ENST00000518910 DUS4LO95620 317 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-211ENST00000518910 IFNA21P01568 189 aa9.39□□□□□ -0.91
CTNNA1-211ENST00000518910 ZP3P21754 424 aa9.39□□□□□ -0.91
CTNNA1-211ENST00000518910 OPRK1P41145 380 aa9.39□□□□□ -0.91
CTNNA1-211ENST00000518910 BEAN1Q3B7T3 259 aa9.39□□□□□ -0.91
CTNNA1-211ENST00000518910 OR1P1Q8NH06 330 aa9.39□□□□□ -0.91
CTNNA1-211ENST00000518910 ZNF502Q8TBZ5 544 aa9.39□□□□□ -0.91
CTNNA1-211ENST00000518910 DTD1Q8TEA8 209 aa9.39□□□□□ -0.91
CTNNA1-211ENST00000518910 CACNG8Q8WXS5 425 aa9.39□□□□□ -0.91
CTNNA1-211ENST00000518910 RCC1LQ96I51 464 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-211ENST00000518910 CXorf58Q96LI9 332 aa9.39□□□□□ -0.91
CTNNA1-211ENST00000518910 C21orf62Q9NYP8 219 aa9.39□□□□□ -0.91
CTNNA1-211ENST00000518910 THYN1Q9P016 225 aa9.39□□□□□ -0.91
CTNNA1-211ENST00000518910 A0A1B0GU03 582 aa9.38□□□□□ -0.91
CTNNA1-211ENST00000518910 SSSCA1O60232 199 aa9.38□□□□□ -0.91
CTNNA1-211ENST00000518910 GGCTO75223 188 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-211ENST00000518910 SUB1P53999 127 aaKnown RBP eCLIP9.38□□□□□ -0.91
CTNNA1-211ENST00000518910 KRTAP10-11P60412 298 aa9.38□□□□□ -0.91
CTNNA1-211ENST00000518910 IAH1Q2TAA2 248 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-211ENST00000518910 PLET1Q6UQ28 207 aa9.38□□□□□ -0.91
CTNNA1-211ENST00000518910 CADM3Q8N126 398 aa9.38□□□□□ -0.91
CTNNA1-211ENST00000518910 C12orf45Q8N5I9 185 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-211ENST00000518910 SLC24A4Q8NFF2 622 aa9.38□□□□□ -0.91
CTNNA1-211ENST00000518910 ZNF431Q8TF32 576 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-211ENST00000518910 OR10C1Q96KK4 312 aa9.38□□□□□ -0.91
CTNNA1-211ENST00000518910 PRR25Q96S07 402 aa9.38□□□□□ -0.91
CTNNA1-211ENST00000518910 C20orf24Q9BUV8 137 aa9.38□□□□□ -0.91
CTNNA1-211ENST00000518910 HIPK2Q9H2X6 1198 aa9.38□□□□□ -0.91
CTNNA1-211ENST00000518910 MRPL36Q9P0J6 103 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-211ENST00000518910 TMED3Q9Y3Q3 217 aa9.38□□□□□ -0.91
CTNNA1-211ENST00000518910 IGHV3-49A0A0A0MS15 119 aa9.37□□□□□ -0.91
CTNNA1-211ENST00000518910 TRBV7-1A0A0A6YYK4 115 aa9.37□□□□□ -0.91
CTNNA1-211ENST00000518910 DUXBA0A1W2PPF3 345 aa9.37□□□□□ -0.91
CTNNA1-211ENST00000518910 INMT-MINDY4F8WBC2 141 aa9.37□□□□□ -0.91
CTNNA1-211ENST00000518910 I3L2K1 104 aa9.37□□□□□ -0.91
CTNNA1-211ENST00000518910 YIF1AO95070 293 aa9.37□□□□□ -0.91
CTNNA1-211ENST00000518910 SIX6O95475 246 aa9.37□□□□□ -0.91
CTNNA1-211ENST00000518910 NPY1RP25929 384 aa9.37□□□□□ -0.91
CTNNA1-211ENST00000518910 POLR2GP62487 172 aaKnown RBP eCLIP9.37□□□□□ -0.91
CTNNA1-211ENST00000518910 C9orf66Q5T8R8 295 aa9.37□□□□□ -0.91
CTNNA1-211ENST00000518910 LRTM2Q8N967 370 aa9.37□□□□□ -0.91
CTNNA1-211ENST00000518910 WFDC9Q8NEX5 89 aa9.37□□□□□ -0.91
CTNNA1-211ENST00000518910 OR9G4Q8NGQ1 327 aa9.37□□□□□ -0.91
CTNNA1-211ENST00000518910 ACY3Q96HD9 319 aa9.37□□□□□ -0.91
CTNNA1-211ENST00000518910 OR4C12Q96R67 309 aa9.37□□□□□ -0.91
CTNNA1-211ENST00000518910 CHRDL1Q9BU40 450 aa9.37□□□□□ -0.91
CTNNA1-211ENST00000518910 HSPB7Q9UBY9 170 aa9.37□□□□□ -0.91
CTNNA1-211ENST00000518910 LSM5Q9Y4Y9 91 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-211ENST00000518910 FBN3Q75N90 2809 aa9.37□□□□□ -0.91
CTNNA1-211ENST00000518910 GOSR2O14653 212 aa9.36□□□□□ -0.91
CTNNA1-211ENST00000518910 TGOLN2O43493 480 aa9.36□□□□□ -0.91
CTNNA1-211ENST00000518910 GNG7O60262 68 aa9.36□□□□□ -0.91
CTNNA1-211ENST00000518910 BRI3O95415 125 aa9.36□□□□□ -0.91
CTNNA1-211ENST00000518910 IFNA4P05014 189 aa9.36□□□□□ -0.91
CTNNA1-211ENST00000518910 HTR2BP41595 481 aa9.36□□□□□ -0.91
CTNNA1-211ENST00000518910 MFAP4P55083 255 aa9.36□□□□□ -0.91
CTNNA1-211ENST00000518910 S100A10P60903 97 aa9.36□□□□□ -0.91
CTNNA1-211ENST00000518910 KLF5Q13887 457 aaPredicted RBP9.36□□□□□ -0.91
CTNNA1-211ENST00000518910 TM4SF20Q53R12 229 aa9.36□□□□□ -0.91
CTNNA1-211ENST00000518910 SPANXN5Q5MJ07 72 aa9.36□□□□□ -0.91
CTNNA1-211ENST00000518910 UNQ9165/PRO28630Q6UXU0 137 aa9.36□□□□□ -0.91
CTNNA1-211ENST00000518910 OR52E5Q8NH55 327 aa9.36□□□□□ -0.91
CTNNA1-211ENST00000518910 VN1R17PQ8TDU5 208 aa9.36□□□□□ -0.91
CTNNA1-211ENST00000518910 DYNLRB2Q8TF09 96 aa9.36□□□□□ -0.91
CTNNA1-211ENST00000518910 MITD1Q8WV92 249 aa9.36□□□□□ -0.91
CTNNA1-211ENST00000518910 TMEM170AQ8WVE7 144 aa9.36□□□□□ -0.91
CTNNA1-211ENST00000518910 MCRIP2Q9BUT9 160 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-211ENST00000518910 FNDC4Q9H6D8 234 aaPredicted RBP9.36□□□□□ -0.91
CTNNA1-211ENST00000518910 IGHV3OR16-13A0A075B7E8 117 aa9.35□□□□□ -0.91
CTNNA1-211ENST00000518910 IGHV3-74A0A0B4J1X5 117 aa9.35□□□□□ -0.91
CTNNA1-211ENST00000518910 F8W735 103 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-211ENST00000518910 PITX3O75364 302 aa9.35□□□□□ -0.91
CTNNA1-211ENST00000518910 NKX2-1P43699 371 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-211ENST00000518910 RND2P52198 227 aa9.35□□□□□ -0.91
CTNNA1-211ENST00000518910 TATDN3Q17R31 274 aa9.35□□□□□ -0.91
CTNNA1-211ENST00000518910 ZBTB8BQ8NAP8 495 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-211ENST00000518910 ZNF114Q8NC26 417 aa9.35□□□□□ -0.91
CTNNA1-211ENST00000518910 OR1L6Q8NGR2 347 aa9.35□□□□□ -0.91
CTNNA1-211ENST00000518910 ELOVL1Q9BW60 279 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms