RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 ARHGEF5Q12774 1597 aa0.31□□□□□ -2.36
SCARNA1-201ENST00000517138 LPAP08519 4548 aa0.31□□□□□ -2.36
SCARNA1-201ENST00000517138 SYNE1Q8NF91 8797 aaKnown RBP0.31□□□□□ -2.36
SCARNA1-201ENST00000517138 QRICH2Q9H0J4 1663 aa0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 LRRC37AA6NMS7 1700 aa0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 ERVK-7P63135 1459 aa0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 PLEKHH2Q8IVE3 1493 aa0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 RGPD8O14715 1765 aaPredicted RBP0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 COL14A1Q05707 1796 aaKnown RBP0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 N4BP2Q86UW6 1770 aaPredicted RBP0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 RGPD5Q99666 1765 aa0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 NEXMIFQ5QGS0 1516 aa0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 ABCC2Q92887 1545 aa0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 OR6C6A6NF89 314 aa0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 IBA57-AS1B1ANH7 110 aa0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 COPEO14579 308 aa0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 GEMIN2O14893 280 aaKnown RBP0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 LIN7AO14910 233 aaPredicted RBP0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 CD79BP40259 229 aa0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 MT4P47944 62 aa0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 TMEM33P57088 247 aa0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 TAS2R20P59543 309 aa0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 TBPL1P62380 186 aa0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 BTN3A2P78410 334 aa0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 EXOC3L4Q17RC7 722 aa0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 GRINAQ7Z429 371 aa0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 SAMD9LQ8IVG5 1584 aa0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 TTC21AQ8NDW8 1320 aa0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 EML6Q6ZMW3 1958 aa0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 TNRC6AQ8NDV7 1962 aaKnown RBP0.3□□□□□ -2.36
SCARNA1-201ENST00000517138 ATP10BO94823 1461 aa0.29□□□□□ -2.36
SCARNA1-201ENST00000517138 IFT140Q96RY7 1462 aa0.29□□□□□ -2.36
SCARNA1-201ENST00000517138 AFDNP55196 1824 aaKnown RBP0.29□□□□□ -2.36
SCARNA1-201ENST00000517138 SCRIBQ14160 1630 aa0.29□□□□□ -2.36
SCARNA1-201ENST00000517138 DNAH11Q96DT5 4516 aa0.29□□□□□ -2.36
SCARNA1-201ENST00000517138 TRAV8-1A0A0A6YYK1 113 aa0.29□□□□□ -2.36
SCARNA1-201ENST00000517138 TRAV38-1A0A0B4J264 116 aa0.29□□□□□ -2.36
SCARNA1-201ENST00000517138 A0A0J9YW62 118 aa0.29□□□□□ -2.36
SCARNA1-201ENST00000517138 H0YC42 278 aa0.29□□□□□ -2.36
SCARNA1-201ENST00000517138 FADS2O95864 444 aaKnown RBP0.29□□□□□ -2.36
SCARNA1-201ENST00000517138 TFPTP0C1Z6 253 aa0.29□□□□□ -2.36
SCARNA1-201ENST00000517138 FXYD7P58549 80 aa0.29□□□□□ -2.36
SCARNA1-201ENST00000517138 RAB14P61106 215 aa0.29□□□□□ -2.36
SCARNA1-201ENST00000517138 GPHB5Q86YW7 130 aa0.29□□□□□ -2.36
SCARNA1-201ENST00000517138 PPWD1Q96BP3 646 aaKnown RBP0.29□□□□□ -2.36
SCARNA1-201ENST00000517138 SMIM12Q96EX1 92 aa0.29□□□□□ -2.36
SCARNA1-201ENST00000517138 PRDM2Q13029 1718 aa0.29□□□□□ -2.36
SCARNA1-201ENST00000517138 QSER1Q2KHR3 1735 aa0.29□□□□□ -2.36
SCARNA1-201ENST00000517138 TMEM94Q12767 1356 aa0.29□□□□□ -2.36
SCARNA1-201ENST00000517138 LOC285556D6RIA3 1793 aa0.29□□□□□ -2.36
SCARNA1-201ENST00000517138 KNTC1P50748 2209 aa0.29□□□□□ -2.36
SCARNA1-201ENST00000517138 SBF2Q86WG5 1849 aa0.29□□□□□ -2.36
SCARNA1-201ENST00000517138 ARFGEF1Q9Y6D6 1849 aa0.29□□□□□ -2.36
SCARNA1-201ENST00000517138 MAGI3Q5TCQ9 1506 aa0.28□□□□□ -2.36
SCARNA1-201ENST00000517138 LMTK2Q8IWU2 1503 aa0.28□□□□□ -2.36
SCARNA1-201ENST00000517138 DUOX2Q9NRD8 1548 aa0.28□□□□□ -2.36
SCARNA1-201ENST00000517138 DEPDC5O75140 1603 aa0.28□□□□□ -2.36
SCARNA1-201ENST00000517138 MUC17Q685J3 4493 aa0.28□□□□□ -2.36
SCARNA1-201ENST00000517138 TNCP24821 2201 aa0.28□□□□□ -2.36
SCARNA1-201ENST00000517138 LCE6AA0A183 80 aa0.28□□□□□ -2.36
SCARNA1-201ENST00000517138 C9JCJ5 164 aa0.28□□□□□ -2.36
SCARNA1-201ENST00000517138 TRAPPC2LH3BP13 241 aa0.28□□□□□ -2.36
SCARNA1-201ENST00000517138 F8A1P23610 371 aa0.28□□□□□ -2.36
SCARNA1-201ENST00000517138 PSMB8P28062 276 aa0.28□□□□□ -2.36
SCARNA1-201ENST00000517138 GRPRP30550 384 aa0.28□□□□□ -2.36
SCARNA1-201ENST00000517138 H2BFSP57053 126 aa0.28□□□□□ -2.36
SCARNA1-201ENST00000517138 SNAP25P60880 206 aa0.28□□□□□ -2.36
SCARNA1-201ENST00000517138 HPCAP84074 193 aa0.28□□□□□ -2.36
SCARNA1-201ENST00000517138 SAPCD1Q5SSQ6 148 aa0.28□□□□□ -2.36
SCARNA1-201ENST00000517138 BLIDQ8IZY5 108 aa0.28□□□□□ -2.36
SCARNA1-201ENST00000517138 MSANTD3Q96H12 275 aa0.28□□□□□ -2.36
SCARNA1-201ENST00000517138 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.28□□□□□ -2.36
SCARNA1-201ENST00000517138 HDGFL3Q9Y3E1 203 aa0.28□□□□□ -2.36
SCARNA1-201ENST00000517138 PLXNA1Q9UIW2 1896 aa0.28□□□□□ -2.36
SCARNA1-201ENST00000517138 CCDC88BA6NC98 1476 aa0.28□□□□□ -2.37
SCARNA1-201ENST00000517138 ZFYVE16Q7Z3T8 1539 aa0.28□□□□□ -2.37
SCARNA1-201ENST00000517138 DNAH2Q9P225 4427 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 PLXNA4Q9HCM2 1894 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 ANAPC1Q9H1A4 1944 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 MEIS3P1A6NDR6 274 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 OR51F1A6NGY5 319 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 METTL15A6NJ78 407 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 SCN2BO60939 215 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 CCDC172P0C7W6 258 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 TRGC1P0CF51 173 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 SPRR2EP22531 72 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 SPRR2BP35325 72 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 SPRR2AP35326 72 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 EMP1P54849 157 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 SMAGPQ0VAQ4 97 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 GNA13Q14344 377 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 C10orf55Q5SWW7 151 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 PPCDCQ96CD2 204 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 CCDC124Q96CT7 223 aaKnown RBP0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 MS4A6EQ96DS6 147 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 ASCL3Q9NQ33 180 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 PARVAQ9NVD7 372 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 NAT8Q9UHE5 227 aa0.27□□□□□ -2.37
SCARNA1-201ENST00000517138 GMEB1Q9Y692 573 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms