RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 PTGES3Q15185 160 aaKnown RBP1.86□□□□□ -2.11
HERC4-215ENST00000515753 TMEM97Q5BJF2 176 aa1.86□□□□□ -2.11
HERC4-215ENST00000515753 FAM71E1Q6IPT2 247 aa1.86□□□□□ -2.11
HERC4-215ENST00000515753 ZFP2Q6ZN57 461 aa1.86□□□□□ -2.11
HERC4-215ENST00000515753 SSX8Q7RTT4 187 aa1.86□□□□□ -2.11
HERC4-215ENST00000515753 APCDD1LQ8NCL9 501 aa1.86□□□□□ -2.11
HERC4-215ENST00000515753 MORN4Q8NDC4 146 aa1.86□□□□□ -2.11
HERC4-215ENST00000515753 Q8WTZ3 238 aa1.86□□□□□ -2.11
HERC4-215ENST00000515753 RTN4IP1Q8WWV3 396 aaPredicted RBP1.86□□□□□ -2.11
HERC4-215ENST00000515753 SLC35B4Q969S0 331 aa1.86□□□□□ -2.11
HERC4-215ENST00000515753 MS4A6EQ96DS6 147 aa1.86□□□□□ -2.11
HERC4-215ENST00000515753 RMI2Q96E14 147 aa1.86□□□□□ -2.11
HERC4-215ENST00000515753 ABHD14BQ96IU4 210 aa1.86□□□□□ -2.11
HERC4-215ENST00000515753 B9D2Q9BPU9 175 aa1.86□□□□□ -2.11
HERC4-215ENST00000515753 AIF1LQ9BQI0 150 aa1.86□□□□□ -2.11
HERC4-215ENST00000515753 SHANK2-AS3Q9BTD1 123 aa1.86□□□□□ -2.11
HERC4-215ENST00000515753 SCRT1Q9BWW7 348 aa1.86□□□□□ -2.11
HERC4-215ENST00000515753 ALX4Q9H161 411 aaPredicted RBP1.86□□□□□ -2.11
HERC4-215ENST00000515753 MED28Q9H204 178 aa1.86□□□□□ -2.11
HERC4-215ENST00000515753 VCXQ9H320 206 aa1.86□□□□□ -2.11
HERC4-215ENST00000515753 TXNIPQ9H3M7 391 aa1.86□□□□□ -2.11
HERC4-215ENST00000515753 BOKQ9UMX3 212 aaPredicted RBP1.86□□□□□ -2.11
HERC4-215ENST00000515753 FREM2Q5SZK8 3169 aa1.86□□□□□ -2.11
HERC4-215ENST00000515753 MYO16Q9Y6X6 1858 aa1.86□□□□□ -2.11
HERC4-215ENST00000515753 PI4KAP42356 2102 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 ZNF638Q14966 1978 aaKnown RBP1.85□□□□□ -2.11
HERC4-215ENST00000515753 SPTA1P02549 2419 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 FRYQ5TBA9 3013 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 DMXL2Q8TDJ6 3036 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 IGKV2D-24A0A075B6R9 120 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 TRGV5A0A0B4J1U4 118 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 LRCOL1A6NCL2 159 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 OR5H14A6NHG9 310 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 C19orf84I3L1E1 186 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 OR1I1O60431 355 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 ZNF324O75467 553 aaPredicted RBP1.85□□□□□ -2.11
HERC4-215ENST00000515753 DEDDO75618 318 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 GPR75O95800 540 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 SERPINA1P01009 418 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 PDYNP01213 254 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 CRHP06850 196 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 CD79AP11912 226 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 MUC1P15941 1255 aaPredicted RBP1.85□□□□□ -2.11
HERC4-215ENST00000515753 ORM2P19652 201 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 CDK2P24941 298 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 SERPINB1P30740 379 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 REG1BP48304 166 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 CDK9P50750 372 aaKnown RBP1.85□□□□□ -2.11
HERC4-215ENST00000515753 CTBP2P56545 445 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 HERVK_113P63121 156 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 TFF3Q07654 80 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 PMAIP1Q13794 54 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 ACOT6Q3I5F7 207 aaPredicted RBP1.85□□□□□ -2.11
HERC4-215ENST00000515753 AGTRAPQ6RW13 159 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 HIST2H3AQ71DI3 136 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 ATP5L2Q7Z4Y8 100 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 TMEM144Q7Z5S9 345 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 TMEM86BQ8N661 226 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 ST20-AS1Q8NBB2 130 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 LY6G5BQ8NDX9 201 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 OR1L8Q8NGR8 309 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 AP3S1Q92572 193 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 FRZBQ92765 325 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 DGCR14Q96DF8 476 aaKnown RBP1.85□□□□□ -2.11
HERC4-215ENST00000515753 DIRAS2Q96HU8 199 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 PRRT1Q99946 306 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 MED18Q9BUE0 208 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 KIFC1Q9BW19 673 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 TTTY12Q9BZ98 90 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 LINC00574Q9H8X3 128 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 PARVBQ9HBI1 364 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 PRTFDC1Q9NRG1 225 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 PRELID1Q9Y255 219 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 PLXNA2O75051 1894 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 SMG1Q96Q15 3661 aaKnown RBP1.85□□□□□ -2.11
HERC4-215ENST00000515753 MYH11P35749 1972 aa1.85□□□□□ -2.11
HERC4-215ENST00000515753 GOLGA4Q13439 2230 aaKnown RBP1.85□□□□□ -2.11
HERC4-215ENST00000515753 WDR87Q6ZQQ6 2873 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 NUMA1Q14980 2115 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 IGKV2-28A0A075B6P5 120 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 UQCRHLA0A096LP55 91 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 IGKV3D-11A0A0A0MRZ8 115 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 PQLC2LA1A4F0 135 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 OR51F1A6NGY5 319 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 CCL22O00626 93 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 MRASO14807 208 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 CHP2O43745 196 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 NOS1APO75052 506 aaPredicted RBP1.84□□□□□ -2.11
HERC4-215ENST00000515753 OR2J2O76002 312 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 FSTL3O95633 263 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 MT-CO2P00403 227 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 IGKV2D-28P01615 120 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 C1QAP02745 245 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 GUSBP08236 651 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 CST2P09228 141 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 CTLA4P16410 223 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 CD36P16671 472 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 NPY1RP25929 384 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 S100A2P29034 98 aa1.84□□□□□ -2.11
HERC4-215ENST00000515753 OR10J1P30954 320 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms