RNA–Protein interactions for RNA: ENST00000515460.5

NUP54-218, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-218ENST00000515460 DSCR9P59020 149 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 SEC61GP60059 68 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 PLGLB1Q02325 96 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 KLRD1Q13241 179 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 EXOSC7Q15024 291 aaKnown RBP4.47□□□□□ -1.69
NUP54-218ENST00000515460 MSMO1Q15800 293 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 LRRC37A5PQ49AS3 106 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 TIMM23BQ5SRD1 257 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 BVES-AS1Q5T3Y7 98 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 SPSB3Q6PJ21 355 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 ZNF322Q6U7Q0 402 aaPredicted RBP4.47□□□□□ -1.69
NUP54-218ENST00000515460 DGAT2L6Q6ZPD8 337 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 PRSS45Q7RTY3 260 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 SLC25A42Q86VD7 318 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 LRP11Q86VZ4 500 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 ZNF595Q8IYB9 648 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 ZIC4Q8N9L1 334 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.47□□□□□ -1.69
NUP54-218ENST00000515460 MORN4Q8NDC4 146 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 OR4F17Q8NGA8 305 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 OR10P1Q8NGE3 313 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 OR10V1Q8NGI7 309 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 OR5D13Q8NGL4 314 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 KIR2DL5BQ8NHK3 375 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 OR51E1Q8TCB6 317 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 SLC25A38Q96DW6 304 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 ADTRPQ96IZ2 230 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 FRG2BQ96QU4 278 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 OR4F4Q96R69 305 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 FAM173AQ9BQD7 235 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 AGMATQ9BSE5 352 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 SMIM3Q9BZL3 60 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 TMEM133Q9H2Q1 129 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 NPVFQ9HCQ7 196 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 SH2D2AQ9NP31 389 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 ALKBH4Q9NXW9 302 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 SIGLEC8Q9NYZ4 499 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 B4GALT7Q9UBV7 327 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 AK3Q9UIJ7 227 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 DHDHQ9UQ10 334 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 WSB1Q9Y6I7 421 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 NCOA6Q14686 2063 aaPredicted RBP4.47□□□□□ -1.69
NUP54-218ENST00000515460 ANKRD12Q6UB98 2062 aa4.47□□□□□ -1.69
NUP54-218ENST00000515460 TRAV9-2A0A087WT02 112 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 TRGV5A0A0B4J1U4 118 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 A0A1W2PRE2 83 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 TMEM212A6NML5 194 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 CDC42EP2O14613 210 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 LDB3O75112 727 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 FCN3O75636 299 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 SOX14O95416 240 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 HLA-AP01891 365 aaKnown RBP4.46□□□□□ -1.7
NUP54-218ENST00000515460 APOA2P02652 100 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 LINC00869P0C866 280 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 PGCP20142 388 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 S100A3P33764 101 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 MTCP1P56278 107 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 IL13RA2Q14627 380 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 MPV17LQ2QL34 196 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 LRRC75BQ2VPJ9 315 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 ZNF791Q3KP31 576 aaPredicted RBP4.46□□□□□ -1.7
NUP54-218ENST00000515460 SLC25A35Q3KQZ1 300 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 FAM174BQ3ZCQ3 159 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 RPL7L1Q6DKI1 246 aaKnown RBP4.46□□□□□ -1.7
NUP54-218ENST00000515460 DGAT2L7PQ6IED9 249 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 KRTCAP2Q8N6L1 136 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 ZNF676Q8N7Q3 588 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 SIGLECL1Q8N7X8 197 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 OR6T1Q8NGN1 323 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 OR10G9Q8NGN4 311 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 OR2K2Q8NGT1 345 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 ZNF721Q8TF20 911 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 RTBDNQ9BSG5 229 aaPredicted RBP4.46□□□□□ -1.7
NUP54-218ENST00000515460 RNF126Q9BV68 326 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 GGTLC1Q9BX51 225 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 IFI27L2Q9H2X8 130 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 PLEKHF2Q9H8W4 249 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 WDR76Q9H967 626 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 EHFQ9NZC4 300 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 IL36GQ9NZH8 169 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 SPRR3Q9UBC9 169 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 PIGLQ9Y2B2 252 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 OARD1Q9Y530 152 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 ZNF780BQ9Y6R6 833 aa4.46□□□□□ -1.7
NUP54-218ENST00000515460 COL7A1Q02388 2944 aa4.45□□□□□ -1.7
NUP54-218ENST00000515460 A0A0G2JLM5 398 aa4.45□□□□□ -1.7
NUP54-218ENST00000515460 A0A1W2PPR1 153 aa4.45□□□□□ -1.7
NUP54-218ENST00000515460 LIPT2A6NK58 231 aa4.45□□□□□ -1.7
NUP54-218ENST00000515460 TMEM250H0YL14 139 aa4.45□□□□□ -1.7
NUP54-218ENST00000515460 H0YL77 283 aa4.45□□□□□ -1.7
NUP54-218ENST00000515460 J3KT08 172 aa4.45□□□□□ -1.7
NUP54-218ENST00000515460 K7N7A8 449 aa4.45□□□□□ -1.7
NUP54-218ENST00000515460 M0R129 80 aa4.45□□□□□ -1.7
NUP54-218ENST00000515460 SAP18O00422 153 aaKnown RBP4.45□□□□□ -1.7
NUP54-218ENST00000515460 SYNGR1O43759 233 aa4.45□□□□□ -1.7
NUP54-218ENST00000515460 SLC2A10O95528 541 aa4.45□□□□□ -1.7
NUP54-218ENST00000515460 EPPINO95925 133 aa4.45□□□□□ -1.7
NUP54-218ENST00000515460 PRH1P02810 166 aa4.45□□□□□ -1.7
NUP54-218ENST00000515460 IGKV3-11P04433 115 aa4.45□□□□□ -1.7
NUP54-218ENST00000515460 P04436 131 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms