RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 PRELID3BQ9Y3B1 194 aa2.17□□□□□ -2.06
CHD1-211ENST00000514344 HLA-DRB4X5D2U9 266 aa2.17□□□□□ -2.06
CHD1-211ENST00000514344 LRCOL1A6NCL2 159 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 CBY3A6NI87 242 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 G3V2T6 193 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 EBAG9O00559 213 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 LECT2O14960 151 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 FKBP6O75344 327 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 CCNKO75909 580 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 C1QBP02746 253 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 AZU1P20160 251 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 NPPCP23582 126 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 GBX2P52951 348 aaPredicted RBP2.16□□□□□ -2.06
CHD1-211ENST00000514344 CMTM1Q8IZ96 169 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 PUSL1Q8N0Z8 303 aaKnown RBP2.16□□□□□ -2.06
CHD1-211ENST00000514344 TCTEX1D2Q8WW35 142 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 MOB3AQ96BX8 217 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 TMEM59Q9BXS4 323 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 TMEM231Q9H6L2 316 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 A0A1B0GU03 582 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 SMIM30A4D0T7 59 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 ZAR1LA6NP61 321 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 FAM90A26D6RGX4 464 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 F6UB75 175 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 DENRO43583 198 aaKnown RBP2.16□□□□□ -2.06
CHD1-211ENST00000514344 MRPS15P82914 257 aaKnown RBP2.16□□□□□ -2.06
CHD1-211ENST00000514344 P2RY14Q15391 338 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 SPINK9Q5DT21 86 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 ZNF773Q6PK81 442 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 TMED4Q7Z7H5 227 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 OR4S2Q8NH73 311 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 RFKQ969G6 155 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 LINC00052Q96N35 136 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 CMSS1Q9BQ75 279 aaKnown RBP2.16□□□□□ -2.06
CHD1-211ENST00000514344 QTRT1Q9BXR0 403 aaKnown RBP2.16□□□□□ -2.06
CHD1-211ENST00000514344 MAGIXQ9H6Y5 334 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 C12orf4Q9NQ89 552 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 TAGLN3Q9UI15 199 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 LY96Q9Y6Y9 160 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 A0A1W2PS18 150 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 FABP7O15540 132 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 LALBAP00709 142 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 CELP19835 753 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 MNAT1P51948 309 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 TAS2R43P59537 309 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 TIMM50Q3ZCQ8 353 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 FAM78BQ5VT40 261 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 C12orf73Q69YU5 71 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 OR51H1Q8NH63 302 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 TMEM203Q969S6 136 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 LGALS12Q96DT0 336 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 ARHGAP5-AS1Q96IT6 56 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 Q9HAA7 133 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 PLGRKTQ9HBL7 147 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 NOP10Q9NPE3 64 aaKnown RBP2.16□□□□□ -2.06
CHD1-211ENST00000514344 GHRLQ9UBU3 117 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 CLEC2DQ9UHP7 191 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 OAZ3Q9UMX2 235 aa2.16□□□□□ -2.06
CHD1-211ENST00000514344 F11RQ9Y624 299 aaKnown RBP2.16□□□□□ -2.06
CHD1-211ENST00000514344 TRAV9-2A0A087WT02 112 aa2.15□□□□□ -2.07
CHD1-211ENST00000514344 PLAC8L1A1L4L8 177 aa2.15□□□□□ -2.07
CHD1-211ENST00000514344 TRDCB7Z8K6 153 aa2.15□□□□□ -2.07
CHD1-211ENST00000514344 M0R2Z0 102 aa2.15□□□□□ -2.07
CHD1-211ENST00000514344 PTHLHP12272 177 aa2.15□□□□□ -2.07
CHD1-211ENST00000514344 NKX2-1P43699 371 aaPredicted RBP2.15□□□□□ -2.07
CHD1-211ENST00000514344 MFAP4P55083 255 aa2.15□□□□□ -2.07
CHD1-211ENST00000514344 BRWD1-AS2P59051 145 aa2.15□□□□□ -2.07
CHD1-211ENST00000514344 DMBX1Q8NFW5 382 aa2.15□□□□□ -2.07
CHD1-211ENST00000514344 RBPMSQ93062 196 aaKnown RBP2.15□□□□□ -2.07
CHD1-211ENST00000514344 METTL26Q96S19 204 aa2.15□□□□□ -2.07
CHD1-211ENST00000514344 ERVK13-1Q9NX77 482 aa2.15□□□□□ -2.07
CHD1-211ENST00000514344 ELF5Q9UKW6 265 aaPredicted RBP2.15□□□□□ -2.07
CHD1-211ENST00000514344 A0A0A6YYD4 124 aa2.15□□□□□ -2.07
CHD1-211ENST00000514344 MARCH11A6NNE9 402 aa2.15□□□□□ -2.07
CHD1-211ENST00000514344 MT-CO2P00403 227 aa2.15□□□□□ -2.07
CHD1-211ENST00000514344 HRASP01112 189 aa2.15□□□□□ -2.07
CHD1-211ENST00000514344 CD37P11049 281 aa2.15□□□□□ -2.07
CHD1-211ENST00000514344 SRMP19623 302 aa2.15□□□□□ -2.07
CHD1-211ENST00000514344 SERPINB10P48595 397 aa2.15□□□□□ -2.07
CHD1-211ENST00000514344 EIF2B2P49770 351 aaKnown RBP2.15□□□□□ -2.07
CHD1-211ENST00000514344 FXYD4P59646 89 aa2.15□□□□□ -2.07
CHD1-211ENST00000514344 WFDC2Q14508 124 aa2.15□□□□□ -2.07
CHD1-211ENST00000514344 SPINK13Q1W4C9 94 aa2.15□□□□□ -2.07
CHD1-211ENST00000514344 ACOT6Q3I5F7 207 aaPredicted RBP2.15□□□□□ -2.07
CHD1-211ENST00000514344 ACSM3Q53FZ2 586 aa2.15□□□□□ -2.07
CHD1-211ENST00000514344 RBM48Q5RL73 367 aaKnown RBP2.15□□□□□ -2.07
CHD1-211ENST00000514344 TMEM17Q86X19 198 aa2.15□□□□□ -2.07
CHD1-211ENST00000514344 WFDC10BQ8IUB3 73 aa2.15□□□□□ -2.07
CHD1-211ENST00000514344 BAP18Q8IXM2 172 aa2.15□□□□□ -2.07
CHD1-211ENST00000514344 OR4A4PQ8NGN8 299 aa2.15□□□□□ -2.07
CHD1-211ENST00000514344 TRAV12-2A0A075B6T6 113 aa2.14□□□□□ -2.07
CHD1-211ENST00000514344 TRBV6-7A0A0A0MS04 114 aa2.14□□□□□ -2.07
CHD1-211ENST00000514344 GAGE12BA1L429 117 aa2.14□□□□□ -2.07
CHD1-211ENST00000514344 J3QRE1 110 aa2.14□□□□□ -2.07
CHD1-211ENST00000514344 GAGE7O76087 117 aa2.14□□□□□ -2.07
CHD1-211ENST00000514344 GAGE12FP0CL80 117 aa2.14□□□□□ -2.07
CHD1-211ENST00000514344 GAGE12GP0CL81 117 aa2.14□□□□□ -2.07
CHD1-211ENST00000514344 GAGE12IP0CL82 117 aa2.14□□□□□ -2.07
CHD1-211ENST00000514344 TRAPPC2P0DI81 140 aa2.14□□□□□ -2.07
CHD1-211ENST00000514344 TRAPPC2BP0DI82 140 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms