RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 ID3Q02535 119 aa15.67■□□□□ 0.1
USP53-208ENST00000514305 ATP5G2Q06055 141 aa15.67■□□□□ 0.1
USP53-208ENST00000514305 SPINK9Q5DT21 86 aa15.67■□□□□ 0.1
USP53-208ENST00000514305 C10orf99Q6UWK7 81 aa15.67■□□□□ 0.1
USP53-208ENST00000514305 OR4D5Q8NGN0 318 aa15.67■□□□□ 0.1
USP53-208ENST00000514305 MRAPQ8TCY5 172 aa15.67■□□□□ 0.1
USP53-208ENST00000514305 OR10C1Q96KK4 312 aa15.67■□□□□ 0.1
USP53-208ENST00000514305 CXorf58Q96LI9 332 aa15.67■□□□□ 0.1
USP53-208ENST00000514305 NOTCH3Q9UM47 2321 aa15.66■□□□□ 0.1
USP53-208ENST00000514305 TRBV9A0A0B4J1U6 114 aa15.66■□□□□ 0.1
USP53-208ENST00000514305 NXPH3O95157 252 aa15.66■□□□□ 0.1
USP53-208ENST00000514305 SCGB1D2O95969 90 aa15.66■□□□□ 0.1
USP53-208ENST00000514305 IFNA10P01566 189 aa15.66■□□□□ 0.1
USP53-208ENST00000514305 RLN2P04090 185 aa15.66■□□□□ 0.1
USP53-208ENST00000514305 RPLP1P05386 114 aaKnown RBP15.66■□□□□ 0.1
USP53-208ENST00000514305 PVALBP20472 110 aaPredicted RBP15.66■□□□□ 0.1
USP53-208ENST00000514305 RPL23AP62750 156 aaKnown RBP15.66■□□□□ 0.1
USP53-208ENST00000514305 KLK9Q2XQG4 91 aa15.66■□□□□ 0.1
USP53-208ENST00000514305 MGAT4CQ9UBM8 478 aa15.66■□□□□ 0.1
USP53-208ENST00000514305 FBXL7Q9UJT9 491 aa15.66■□□□□ 0.1
USP53-208ENST00000514305 KLK9Q9UKQ9 250 aa15.66■□□□□ 0.1
USP53-208ENST00000514305 MPTX1A8MV57 137 aa15.65■□□□□ 0.1
USP53-208ENST00000514305 PF4P02776 101 aa15.65■□□□□ 0.1
USP53-208ENST00000514305 RAB11AP62491 216 aa15.65■□□□□ 0.1
USP53-208ENST00000514305 RHOGP84095 191 aa15.65■□□□□ 0.1
USP53-208ENST00000514305 EXOSC2Q13868 293 aaKnown RBP15.65■□□□□ 0.1
USP53-208ENST00000514305 ZNF491Q8N8L2 437 aa15.65■□□□□ 0.1
USP53-208ENST00000514305 SLC24A4Q8NFF2 622 aa15.65■□□□□ 0.1
USP53-208ENST00000514305 ASB13Q8WXK3 278 aa15.65■□□□□ 0.1
USP53-208ENST00000514305 RAB40CQ96S21 281 aa15.65■□□□□ 0.1
USP53-208ENST00000514305 P2RX4Q99571 388 aa15.65■□□□□ 0.1
USP53-208ENST00000514305 NMES1Q9C002 83 aa15.65■□□□□ 0.1
USP53-208ENST00000514305 KLK15Q9H2R5 256 aa15.65■□□□□ 0.1
USP53-208ENST00000514305 IGLV11-55A0A075B6I3 123 aa15.64■□□□□ 0.09
USP53-208ENST00000514305 L7N2F9 121 aa15.64■□□□□ 0.09
USP53-208ENST00000514305 OR2J3O76001 311 aa15.64■□□□□ 0.09
USP53-208ENST00000514305 VAMP2P63027 116 aa15.64■□□□□ 0.09
USP53-208ENST00000514305 MYOZ3Q8TDC0 251 aa15.64■□□□□ 0.09
USP53-208ENST00000514305 EEF1AKMT3Q96AZ1 226 aa15.64■□□□□ 0.09
USP53-208ENST00000514305 RPS10-NUDT3A0A1W2PQS6 291 aa15.63■□□□□ 0.09
USP53-208ENST00000514305 PET100P0DJ07 73 aa15.63■□□□□ 0.09
USP53-208ENST00000514305 NPY1RP25929 384 aa15.63■□□□□ 0.09
USP53-208ENST00000514305 TAS2R30P59541 319 aa15.63■□□□□ 0.09
USP53-208ENST00000514305 C2orf83Q53S99 150 aa15.63■□□□□ 0.09
USP53-208ENST00000514305 TCTEX1D4Q5JR98 221 aa15.63■□□□□ 0.09
USP53-208ENST00000514305 ETFRF1Q6IPR1 90 aa15.63■□□□□ 0.09
USP53-208ENST00000514305 KLHL30-AS1Q8NEE0 82 aa15.63■□□□□ 0.09
USP53-208ENST00000514305 RNASEH2CQ8TDP1 164 aaKnown RBP15.63■□□□□ 0.09
USP53-208ENST00000514305 VN1R17PQ8TDU5 208 aa15.63■□□□□ 0.09
USP53-208ENST00000514305 C4orf3Q8WVX3 66 aa15.63■□□□□ 0.09
USP53-208ENST00000514305 FANCD2OSQ96PS1 177 aa15.63■□□□□ 0.09
USP53-208ENST00000514305 AURKAIP1Q9NWT8 199 aaPredicted RBP15.63■□□□□ 0.09
USP53-208ENST00000514305 GAR1Q9NY12 217 aaKnown RBP15.63■□□□□ 0.09
USP53-208ENST00000514305 TRBV7-1A0A0A6YYK4 115 aa15.62■□□□□ 0.09
USP53-208ENST00000514305 SCGB2A1O75556 95 aa15.62■□□□□ 0.09
USP53-208ENST00000514305 SCAF4O95104 1147 aaKnown RBP15.62■□□□□ 0.09
USP53-208ENST00000514305 PRH1P02810 166 aa15.62■□□□□ 0.09
USP53-208ENST00000514305 RRAS2P62070 204 aaPredicted RBP15.62■□□□□ 0.09
USP53-208ENST00000514305 POLR2GP62487 172 aaKnown RBP eCLIP15.62■□□□□ 0.09
USP53-208ENST00000514305 C15orf32Q32M92 178 aa15.62■□□□□ 0.09
USP53-208ENST00000514305 WFDC9Q8NEX5 89 aa15.62■□□□□ 0.09
USP53-208ENST00000514305 MISP3Q96FF7 219 aa15.62■□□□□ 0.09
USP53-208ENST00000514305 ATP6V0BQ99437 205 aa15.62■□□□□ 0.09
USP53-208ENST00000514305 MAGT1Q9H0U3 335 aa15.62■□□□□ 0.09
USP53-208ENST00000514305 STRAPQ9Y3F4 350 aaKnown RBP15.62■□□□□ 0.09
USP53-208ENST00000514305 RNASE2P10153 161 aaKnown RBP15.61■□□□□ 0.09
USP53-208ENST00000514305 IAPPP10997 89 aa15.61■□□□□ 0.09
USP53-208ENST00000514305 IGLL1P15814 213 aa15.61■□□□□ 0.09
USP53-208ENST00000514305 RUNX1Q01196 453 aa15.61■□□□□ 0.09
USP53-208ENST00000514305 BSXQ3C1V8 233 aa15.61■□□□□ 0.09
USP53-208ENST00000514305 LCNL1Q6ZST4 164 aa15.61■□□□□ 0.09
USP53-208ENST00000514305 DPF1Q92782 380 aa15.61■□□□□ 0.09
USP53-208ENST00000514305 SMIM8Q96KF7 97 aa15.61■□□□□ 0.09
USP53-208ENST00000514305 PSENENQ9NZ42 101 aa15.61■□□□□ 0.09
USP53-208ENST00000514305 LSM5Q9Y4Y9 91 aaKnown RBP15.61■□□□□ 0.09
USP53-208ENST00000514305 SSSCA1O60232 199 aa15.6■□□□□ 0.09
USP53-208ENST00000514305 MBPP02686 304 aaPredicted RBP15.6■□□□□ 0.09
USP53-208ENST00000514305 IFNA4P05014 189 aa15.6■□□□□ 0.09
USP53-208ENST00000514305 LGALS1P09382 135 aaKnown RBP15.6■□□□□ 0.09
USP53-208ENST00000514305 OR8U8P0C7N1 319 aa15.6■□□□□ 0.09
USP53-208ENST00000514305 S100A10P60903 97 aa15.6■□□□□ 0.09
USP53-208ENST00000514305 RANGRFQ9HD47 186 aaPredicted RBP15.6■□□□□ 0.09
USP53-208ENST00000514305 NDUFB8O95169 186 aa15.59■□□□□ 0.09
USP53-208ENST00000514305 SIX6O95475 246 aa15.59■□□□□ 0.09
USP53-208ENST00000514305 OPRK1P41145 380 aa15.59■□□□□ 0.09
USP53-208ENST00000514305 KIAA0141Q14154 515 aaPredicted RBP15.59■□□□□ 0.09
USP53-208ENST00000514305 SPANXN5Q5MJ07 72 aa15.59■□□□□ 0.09
USP53-208ENST00000514305 ZNF343Q6P1L6 599 aa15.59■□□□□ 0.09
USP53-208ENST00000514305 PINX1Q96BK5 328 aaKnown RBP15.59■□□□□ 0.09
USP53-208ENST00000514305 TXN2Q99757 166 aa15.59■□□□□ 0.09
USP53-208ENST00000514305 PAIP2BQ9ULR5 123 aaKnown RBP15.59■□□□□ 0.09
USP53-208ENST00000514305 K7EPK0 472 aa15.58■□□□□ 0.08
USP53-208ENST00000514305 TSC22D2O75157 780 aa15.58■□□□□ 0.08
USP53-208ENST00000514305 HSPB1P04792 205 aaKnown RBP15.58■□□□□ 0.08
USP53-208ENST00000514305 MYCNOSP40205 109 aa15.58■□□□□ 0.08
USP53-208ENST00000514305 NPBWR1P48145 328 aa15.58■□□□□ 0.08
USP53-208ENST00000514305 MFAP4P55083 255 aa15.58■□□□□ 0.08
USP53-208ENST00000514305 FGL1Q08830 312 aa15.58■□□□□ 0.08
USP53-208ENST00000514305 PVRIGQ6DKI7 326 aa15.58■□□□□ 0.08
USP53-208ENST00000514305 RCC1LQ96I51 464 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms