RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 TEX15Q9BXT5 2789 aa10.21□□□□□ -0.78
PVT1-203ENST00000513868 PRRC2AP48634 2157 aaKnown RBP10.21□□□□□ -0.78
PVT1-203ENST00000513868 ITPR2Q14571 2701 aa10.2□□□□□ -0.78
PVT1-203ENST00000513868 C9JQL5 133 aa10.2□□□□□ -0.78
PVT1-203ENST00000513868 C17orf112F2Z3M2 114 aa10.2□□□□□ -0.78
PVT1-203ENST00000513868 YIF1AO95070 293 aa10.2□□□□□ -0.78
PVT1-203ENST00000513868 FAM106CPP0CH98 169 aa10.2□□□□□ -0.78
PVT1-203ENST00000513868 TMEM11P17152 192 aa10.2□□□□□ -0.78
PVT1-203ENST00000513868 OPRK1P41145 380 aa10.2□□□□□ -0.78
PVT1-203ENST00000513868 SUB1P53999 127 aaKnown RBP eCLIP10.2□□□□□ -0.78
PVT1-203ENST00000513868 TMEM144Q7Z5S9 345 aa10.2□□□□□ -0.78
PVT1-203ENST00000513868 LINC01356Q8N9X3 169 aa10.2□□□□□ -0.78
PVT1-203ENST00000513868 SRSF8Q9BRL6 282 aaKnown RBP10.2□□□□□ -0.78
PVT1-203ENST00000513868 DMRT1Q9Y5R6 373 aa10.2□□□□□ -0.78
PVT1-203ENST00000513868 TMEM218A2RU14 115 aa10.19□□□□□ -0.78
PVT1-203ENST00000513868 BTBD17A6NE02 478 aa10.19□□□□□ -0.78
PVT1-203ENST00000513868 RNF223E7ERA6 249 aa10.19□□□□□ -0.78
PVT1-203ENST00000513868 GATA3P23771 443 aa10.19□□□□□ -0.78
PVT1-203ENST00000513868 BRS3P32247 399 aa10.19□□□□□ -0.78
PVT1-203ENST00000513868 FXYD3Q14802 87 aa10.19□□□□□ -0.78
PVT1-203ENST00000513868 KLF17Q5JT82 389 aaPredicted RBP10.19□□□□□ -0.78
PVT1-203ENST00000513868 Q5PR19 223 aa10.19□□□□□ -0.78
PVT1-203ENST00000513868 SLC16A13Q7RTY0 426 aa10.19□□□□□ -0.78
PVT1-203ENST00000513868 MRPL41Q8IXM3 137 aaKnown RBP10.19□□□□□ -0.78
PVT1-203ENST00000513868 Q8N9W7 124 aa10.19□□□□□ -0.78
PVT1-203ENST00000513868 MAPK1IP1LQ8NDC0 245 aa10.19□□□□□ -0.78
PVT1-203ENST00000513868 LFNGQ8NES3 379 aa10.19□□□□□ -0.78
PVT1-203ENST00000513868 OR2T6Q8NHC8 308 aa10.19□□□□□ -0.78
PVT1-203ENST00000513868 PIFOQ8TCI5 191 aa10.19□□□□□ -0.78
PVT1-203ENST00000513868 SSMEM1Q8WWF3 244 aa10.19□□□□□ -0.78
PVT1-203ENST00000513868 ITPR3Q14573 2671 aa10.19□□□□□ -0.78
PVT1-203ENST00000513868 A0A0U1RQK1 487 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 NCBP2LA6PVI3 153 aaKnown RBP10.18□□□□□ -0.78
PVT1-203ENST00000513868 EIF3GO75821 320 aaKnown RBP eCLIP10.18□□□□□ -0.78
PVT1-203ENST00000513868 CNIH1O95406 144 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 MBP02144 154 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 CRYGCP07315 174 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 ADCYAP1P18509 176 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 CX3CL1P78423 397 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 GUK1Q16774 197 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 GCSAMLQ5JQS6 135 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 MIC13Q5XKP0 118 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 ZNF562Q6V9R5 426 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 OR10G4Q8NGN3 311 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 OR10G9Q8NGN4 311 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 OR10G7Q8NGN6 311 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 OR1P1Q8NH06 330 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 MEGF9Q9H1U4 602 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 MRPL36Q9P0J6 103 aaKnown RBP10.18□□□□□ -0.78
PVT1-203ENST00000513868 F11RQ9Y624 299 aaKnown RBP10.18□□□□□ -0.78
PVT1-203ENST00000513868 SOX21Q9Y651 276 aaPredicted RBP10.18□□□□□ -0.78
PVT1-203ENST00000513868 PXMP4Q9Y6I8 212 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 SOX15O60248 233 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 LINC00869P0C866 280 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 DEFA4P12838 97 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 M6PRP20645 277 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 RPL29P47914 159 aaKnown RBP10.18□□□□□ -0.78
PVT1-203ENST00000513868 PRR20EP86478 221 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 PRR20CP86479 221 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 PRR20DP86480 221 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 PRR20BP86481 221 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 PRR20AP86496 221 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 NDPQ00604 133 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 LCN15Q6UWW0 184 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 FAM103A1Q9BTL3 118 aaKnown RBP10.18□□□□□ -0.78
PVT1-203ENST00000513868 TREM1Q9NP99 234 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 SLC45A2Q9UMX9 530 aa10.18□□□□□ -0.78
PVT1-203ENST00000513868 SEC14L6B5MCN3 397 aa10.17□□□□□ -0.78
PVT1-203ENST00000513868 IGHV3-48P01763 117 aa10.17□□□□□ -0.78
PVT1-203ENST00000513868 HBE1P02100 147 aa10.17□□□□□ -0.78
PVT1-203ENST00000513868 CTRB1P17538 263 aa10.17□□□□□ -0.78
PVT1-203ENST00000513868 FGF8P55075 233 aaPredicted RBP10.17□□□□□ -0.78
PVT1-203ENST00000513868 C10orf91Q5T1B1 145 aa10.17□□□□□ -0.78
PVT1-203ENST00000513868 ASPHD1Q5U4P2 390 aa10.17□□□□□ -0.78
PVT1-203ENST00000513868 CTRB2Q6GPI1 263 aa10.17□□□□□ -0.78
PVT1-203ENST00000513868 PRSS57Q6UWY2 283 aa10.17□□□□□ -0.78
PVT1-203ENST00000513868 STPG3Q8N7X2 389 aa10.17□□□□□ -0.78
PVT1-203ENST00000513868 NARS2Q96I59 477 aaKnown RBP10.17□□□□□ -0.78
PVT1-203ENST00000513868 RARRES2Q99969 163 aa10.17□□□□□ -0.78
PVT1-203ENST00000513868 UNC79Q9P2D8 2635 aa10.16□□□□□ -0.78
PVT1-203ENST00000513868 IGHV7-81A0A0B4J1V7 117 aa10.16□□□□□ -0.78
PVT1-203ENST00000513868 CTXND1A0A1B0GTU2 59 aa10.16□□□□□ -0.78
PVT1-203ENST00000513868 MAP1LC3B2A6NCE7 125 aa10.16□□□□□ -0.78
PVT1-203ENST00000513868 IGHV4-31P0DP07 118 aa10.16□□□□□ -0.78
PVT1-203ENST00000513868 EGR2P11161 476 aaPredicted RBP10.16□□□□□ -0.78
PVT1-203ENST00000513868 ACOT6Q3I5F7 207 aaPredicted RBP10.16□□□□□ -0.78
PVT1-203ENST00000513868 FAM122CQ6P4D5 195 aa10.16□□□□□ -0.78
PVT1-203ENST00000513868 ARPC1AQ92747 370 aa10.16□□□□□ -0.78
PVT1-203ENST00000513868 RAB24Q969Q5 203 aa10.16□□□□□ -0.78
PVT1-203ENST00000513868 SLC35E1Q96K37 410 aa10.16□□□□□ -0.78
PVT1-203ENST00000513868 ACTR3CQ9C0K3 210 aaPredicted RBP10.16□□□□□ -0.78
PVT1-203ENST00000513868 MAP1LC3BQ9GZQ8 125 aa10.16□□□□□ -0.78
PVT1-203ENST00000513868 SLC25A22Q9H936 323 aa10.16□□□□□ -0.78
PVT1-203ENST00000513868 SLC39A9Q9NUM3 307 aa10.16□□□□□ -0.78
PVT1-203ENST00000513868 C1RLQ9NZP8 487 aa10.16□□□□□ -0.78
PVT1-203ENST00000513868 CREBBPQ92793 2442 aa10.16□□□□□ -0.78
PVT1-203ENST00000513868 IGKV1D-37A0A075B6S9 117 aa10.15□□□□□ -0.78
PVT1-203ENST00000513868 RBFOX3A6NFN3 312 aa10.15□□□□□ -0.78
PVT1-203ENST00000513868 HMGB3O15347 200 aaKnown RBP10.15□□□□□ -0.78
PVT1-203ENST00000513868 TGFAP01135 160 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms