RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 HIST1H1BP16401 226 aaKnown RBP9.79□□□□□ -0.84
PDPN-210ENST00000513143 CAV2P51636 162 aa9.79□□□□□ -0.84
PDPN-210ENST00000513143 RAB11AP62491 216 aa9.79□□□□□ -0.84
PDPN-210ENST00000513143 SLC25A24Q6NUK1 477 aa9.79□□□□□ -0.84
PDPN-210ENST00000513143 TEX38Q6PEX7 206 aa9.79□□□□□ -0.84
PDPN-210ENST00000513143 TMEM65Q6PI78 240 aa9.79□□□□□ -0.84
PDPN-210ENST00000513143 C10orf99Q6UWK7 81 aa9.79□□□□□ -0.84
PDPN-210ENST00000513143 TMEM252Q8N6L7 170 aa9.79□□□□□ -0.84
PDPN-210ENST00000513143 OR11H4Q8NGC9 324 aa9.79□□□□□ -0.84
PDPN-210ENST00000513143 RNF114Q9Y508 228 aa9.79□□□□□ -0.84
PDPN-210ENST00000513143 FXYD6-FXYD2A0A087WZ82 144 aa9.78□□□□□ -0.84
PDPN-210ENST00000513143 IGSF23A1L1A6 192 aa9.78□□□□□ -0.84
PDPN-210ENST00000513143 PMS2P5A8MQ11 134 aa9.78□□□□□ -0.84
PDPN-210ENST00000513143 CORTO00230 105 aa9.78□□□□□ -0.84
PDPN-210ENST00000513143 PFDN1O60925 122 aa9.78□□□□□ -0.84
PDPN-210ENST00000513143 C1QBP02746 253 aa9.78□□□□□ -0.84
PDPN-210ENST00000513143 ELANEP08246 267 aa9.78□□□□□ -0.84
PDPN-210ENST00000513143 OR8U8P0C7N1 319 aa9.78□□□□□ -0.84
PDPN-210ENST00000513143 METTL15P1P0C7V9 234 aa9.78□□□□□ -0.84
PDPN-210ENST00000513143 MDKP21741 143 aaPredicted RBP9.78□□□□□ -0.84
PDPN-210ENST00000513143 PSMB8P28062 276 aa9.78□□□□□ -0.84
PDPN-210ENST00000513143 PROK1P58294 105 aa9.78□□□□□ -0.84
PDPN-210ENST00000513143 FOXE3Q13461 319 aa9.78□□□□□ -0.84
PDPN-210ENST00000513143 ETV3LQ6ZN32 361 aa9.78□□□□□ -0.84
PDPN-210ENST00000513143 ZNF546Q86UE3 836 aa9.78□□□□□ -0.84
PDPN-210ENST00000513143 COMMD1Q8N668 190 aa9.78□□□□□ -0.84
PDPN-210ENST00000513143 KLHDC1Q8N7A1 406 aa9.78□□□□□ -0.84
PDPN-210ENST00000513143 RNF152Q8N8N0 203 aa9.78□□□□□ -0.84
PDPN-210ENST00000513143 RNASEH2CQ8TDP1 164 aaKnown RBP9.78□□□□□ -0.84
PDPN-210ENST00000513143 SLC25A31Q9H0C2 315 aa9.78□□□□□ -0.84
PDPN-210ENST00000513143 SLA2Q9H6Q3 261 aa9.78□□□□□ -0.84
PDPN-210ENST00000513143 ZNF355PQ9NSJ1 428 aa9.78□□□□□ -0.84
PDPN-210ENST00000513143 HMSDA8MTL9 139 aa9.77□□□□□ -0.85
PDPN-210ENST00000513143 PRSS46E5RG02 174 aa9.77□□□□□ -0.85
PDPN-210ENST00000513143 IFNA4P05014 189 aa9.77□□□□□ -0.85
PDPN-210ENST00000513143 PF4V1P10720 104 aa9.77□□□□□ -0.85
PDPN-210ENST00000513143 RPL12P30050 165 aaKnown RBP9.77□□□□□ -0.85
PDPN-210ENST00000513143 RAB9AP51151 201 aa9.77□□□□□ -0.85
PDPN-210ENST00000513143 RHOGP84095 191 aa9.77□□□□□ -0.85
PDPN-210ENST00000513143 FOXL1Q12952 345 aa9.77□□□□□ -0.85
PDPN-210ENST00000513143 EXOSC2Q13868 293 aaKnown RBP9.77□□□□□ -0.85
PDPN-210ENST00000513143 KRTAP24-1Q3LI83 254 aa9.77□□□□□ -0.85
PDPN-210ENST00000513143 NECAP1Q8NC96 275 aa9.77□□□□□ -0.85
PDPN-210ENST00000513143 OR5AU1Q8NGC0 362 aa9.77□□□□□ -0.85
PDPN-210ENST00000513143 MISP3Q96FF7 219 aa9.77□□□□□ -0.85
PDPN-210ENST00000513143 MS4A10Q96PG2 267 aa9.77□□□□□ -0.85
PDPN-210ENST00000513143 KLK15Q9H2R5 256 aa9.77□□□□□ -0.85
PDPN-210ENST00000513143 THYN1Q9P016 225 aa9.77□□□□□ -0.85
PDPN-210ENST00000513143 FBXL7Q9UJT9 491 aa9.77□□□□□ -0.85
PDPN-210ENST00000513143 PAIP2BQ9ULR5 123 aaKnown RBP9.77□□□□□ -0.85
PDPN-210ENST00000513143 TNFSF18Q9UNG2 199 aa9.77□□□□□ -0.85
PDPN-210ENST00000513143 I3L2K1 104 aa9.76□□□□□ -0.85
PDPN-210ENST00000513143 OR2J3O76001 311 aa9.76□□□□□ -0.85
PDPN-210ENST00000513143 CST7O76096 145 aa9.76□□□□□ -0.85
PDPN-210ENST00000513143 SCAF4O95104 1147 aaKnown RBP9.76□□□□□ -0.85
PDPN-210ENST00000513143 NDUFB8O95169 186 aa9.76□□□□□ -0.85
PDPN-210ENST00000513143 TRGV3P03979 118 aa9.76□□□□□ -0.85
PDPN-210ENST00000513143 SULT1A1P50225 295 aa9.76□□□□□ -0.85
PDPN-210ENST00000513143 EWSR1Q01844 656 aaKnown RBP eCLIP9.76□□□□□ -0.85
PDPN-210ENST00000513143 BAXQ07812 192 aa9.76□□□□□ -0.85
PDPN-210ENST00000513143 ARL16Q0P5N6 197 aa9.76□□□□□ -0.85
PDPN-210ENST00000513143 HAPLN4Q86UW8 402 aa9.76□□□□□ -0.85
PDPN-210ENST00000513143 STX12Q86Y82 276 aa9.76□□□□□ -0.85
PDPN-210ENST00000513143 OR10P1Q8NGE3 313 aa9.76□□□□□ -0.85
PDPN-210ENST00000513143 MYOZ3Q8TDC0 251 aa9.76□□□□□ -0.85
PDPN-210ENST00000513143 AQP10Q96PS8 301 aa9.76□□□□□ -0.85
PDPN-210ENST00000513143 FNDC4Q9H6D8 234 aaPredicted RBP9.76□□□□□ -0.85
PDPN-210ENST00000513143 ATRQ13535 2644 aa9.75□□□□□ -0.85
PDPN-210ENST00000513143 RNF222A6NCQ9 220 aa9.75□□□□□ -0.85
PDPN-210ENST00000513143 FAM223BA6NKX1 122 aa9.75□□□□□ -0.85
PDPN-210ENST00000513143 K7EIM0 57 aa9.75□□□□□ -0.85
PDPN-210ENST00000513143 MT-CO2P00403 227 aa9.75□□□□□ -0.85
PDPN-210ENST00000513143 GPX4P36969 197 aaPredicted RBP9.75□□□□□ -0.85
PDPN-210ENST00000513143 NUP62P37198 522 aaPredicted RBP9.75□□□□□ -0.85
PDPN-210ENST00000513143 OPRK1P41145 380 aa9.75□□□□□ -0.85
PDPN-210ENST00000513143 TPPP2P59282 170 aa9.75□□□□□ -0.85
PDPN-210ENST00000513143 NHLH2Q02577 135 aa9.75□□□□□ -0.85
PDPN-210ENST00000513143 CD69Q07108 199 aa9.75□□□□□ -0.85
PDPN-210ENST00000513143 KIAA0141Q14154 515 aaPredicted RBP9.75□□□□□ -0.85
PDPN-210ENST00000513143 MLANAQ16655 118 aa9.75□□□□□ -0.85
PDPN-210ENST00000513143 ZFP69Q49AA0 526 aa9.75□□□□□ -0.85
PDPN-210ENST00000513143 OR8G2PQ6IF36 304 aa9.75□□□□□ -0.85
PDPN-210ENST00000513143 LCNL1Q6ZST4 164 aa9.75□□□□□ -0.85
PDPN-210ENST00000513143 FAM223AQ8IWN6 122 aa9.75□□□□□ -0.85
PDPN-210ENST00000513143 INO80EQ8NBZ0 244 aaPredicted RBP9.75□□□□□ -0.85
PDPN-210ENST00000513143 VN1R17PQ8TDU5 208 aa9.75□□□□□ -0.85
PDPN-210ENST00000513143 CACNG8Q8WXS5 425 aa9.75□□□□□ -0.85
PDPN-210ENST00000513143 PINX1Q96BK5 328 aaKnown RBP9.75□□□□□ -0.85
PDPN-210ENST00000513143 USMG5Q96IX5 58 aa9.75□□□□□ -0.85
PDPN-210ENST00000513143 HYLS1Q96M11 299 aa9.75□□□□□ -0.85
PDPN-210ENST00000513143 HSPB11Q9Y547 144 aa9.75□□□□□ -0.85
PDPN-210ENST00000513143 RPS10-NUDT3A0A1W2PQS6 291 aa9.74□□□□□ -0.85
PDPN-210ENST00000513143 ARPC5O15511 151 aa9.74□□□□□ -0.85
PDPN-210ENST00000513143 RPLP1P05386 114 aaKnown RBP9.74□□□□□ -0.85
PDPN-210ENST00000513143 S100A11P31949 105 aa9.74□□□□□ -0.85
PDPN-210ENST00000513143 HBG1P69891 147 aa9.74□□□□□ -0.85
PDPN-210ENST00000513143 HBG2P69892 147 aa9.74□□□□□ -0.85
PDPN-210ENST00000513143 DEFA5Q01523 94 aa9.74□□□□□ -0.85
PDPN-210ENST00000513143 C15orf32Q32M92 178 aa9.74□□□□□ -0.85
PDPN-210ENST00000513143 TCTEX1D4Q5JR98 221 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms