RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 A0A0G2JLM5 398 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 C2orf70A6NJV1 201 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 G3V3Q6 166 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 M0R1X1 148 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 PGLYRP1O75594 196 aaPredicted RBP6.69□□□□□ -1.34
NUP54-211ENST00000512151 RLN1P04808 185 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 DUTP33316 252 aaKnown RBP6.69□□□□□ -1.34
NUP54-211ENST00000512151 MFAP2P55001 183 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 APOC4P55056 127 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 RAP2BP61225 183 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 SSBP2P81877 361 aaPredicted RBP6.69□□□□□ -1.34
NUP54-211ENST00000512151 DHODHQ02127 395 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 MSMO1Q15800 293 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 PHLDA2Q53GA4 152 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 TM4SF20Q53R12 229 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 TMEM177Q53S58 311 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 FAM71F2Q6NXP2 309 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 ZNF767PQ75MW2 155 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.69□□□□□ -1.34
NUP54-211ENST00000512151 ADAD2Q8NCV1 583 aaKnown RBP6.69□□□□□ -1.34
NUP54-211ENST00000512151 OR11H4Q8NGC9 324 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 OR52B4Q8NGK2 314 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 TMEM230Q96A57 120 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 MFFQ9GZY8 342 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 C5orf66Q9H5L9 145 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 HSPB11Q9Y547 144 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 H3BUA1 57 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 GPR31O00270 319 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 UBE2CO00762 179 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 DEFB4AO15263 64 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 SCAF4O95104 1147 aaKnown RBP6.69□□□□□ -1.34
NUP54-211ENST00000512151 CA2P00918 260 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 CTSDP07339 412 aaPredicted RBP6.69□□□□□ -1.34
NUP54-211ENST00000512151 PGAM2P15259 253 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 S100A1P23297 94 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 PLGLAQ15195 96 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 LGALS9BQ3B8N2 356 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 LPCAT3Q6P1A2 487 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 ZNF562Q6V9R5 426 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 Q6ZR54 194 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 SLC38A6Q8IZM9 456 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 POM121L12Q8N7R1 296 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 ZBTB34Q8NCN2 500 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 FAT1Q14517 4588 aa6.69□□□□□ -1.34
NUP54-211ENST00000512151 H0YJW9 148 aa6.68□□□□□ -1.34
NUP54-211ENST00000512151 SLC22A5O76082 557 aa6.68□□□□□ -1.34
NUP54-211ENST00000512151 S1PR2O95136 353 aa6.68□□□□□ -1.34
NUP54-211ENST00000512151 OR4E1P0C645 316 aa6.68□□□□□ -1.34
NUP54-211ENST00000512151 INAFM2P0DMQ5 153 aa6.68□□□□□ -1.34
NUP54-211ENST00000512151 RPL35AP18077 110 aaKnown RBP6.68□□□□□ -1.34
NUP54-211ENST00000512151 C4BPBP20851 252 aa6.68□□□□□ -1.34
NUP54-211ENST00000512151 PIGPP57054 158 aa6.68□□□□□ -1.34
NUP54-211ENST00000512151 RND3P61587 244 aa6.68□□□□□ -1.34
NUP54-211ENST00000512151 SURF2Q15527 256 aaPredicted RBP6.68□□□□□ -1.34
NUP54-211ENST00000512151 LGALSLQ3ZCW2 172 aaPredicted RBP6.68□□□□□ -1.34
NUP54-211ENST00000512151 OR2B11Q5JQS5 317 aa6.68□□□□□ -1.34
NUP54-211ENST00000512151 ZNF66Q6ZN08 573 aa6.68□□□□□ -1.34
NUP54-211ENST00000512151 TBC1D26Q86UD7 250 aa6.68□□□□□ -1.34
NUP54-211ENST00000512151 SLC7A5P1Q8MH63 180 aa6.68□□□□□ -1.34
NUP54-211ENST00000512151 UXS1Q8NBZ7 420 aa6.68□□□□□ -1.34
NUP54-211ENST00000512151 OR5AN1Q8NGI8 311 aa6.68□□□□□ -1.34
NUP54-211ENST00000512151 OR2T35Q8NGX2 323 aa6.68□□□□□ -1.34
NUP54-211ENST00000512151 SLC2A9Q9NRM0 540 aa6.68□□□□□ -1.34
NUP54-211ENST00000512151 TECRQ9NZ01 308 aaKnown RBP6.68□□□□□ -1.34
NUP54-211ENST00000512151 MLXQ9UH92 298 aa6.68□□□□□ -1.34
NUP54-211ENST00000512151 SRRM2Q9UQ35 2752 aaKnown RBP6.68□□□□□ -1.34
NUP54-211ENST00000512151 IGHV4-4A0A075B6R2 117 aa6.67□□□□□ -1.34
NUP54-211ENST00000512151 MPPED1O15442 326 aa6.67□□□□□ -1.34
NUP54-211ENST00000512151 FCGR3BO75015 233 aa6.67□□□□□ -1.34
NUP54-211ENST00000512151 HLA-AP01891 365 aaKnown RBP6.67□□□□□ -1.34
NUP54-211ENST00000512151 IGKV1-16P04430 117 aa6.67□□□□□ -1.34
NUP54-211ENST00000512151 SUPT4H1P63272 117 aaKnown RBP6.67□□□□□ -1.34
NUP54-211ENST00000512151 FXYD3Q14802 87 aa6.67□□□□□ -1.34
NUP54-211ENST00000512151 PSG5Q15238 335 aa6.67□□□□□ -1.34
NUP54-211ENST00000512151 C4orf46Q504U0 113 aa6.67□□□□□ -1.34
NUP54-211ENST00000512151 ZNF585BQ52M93 769 aa6.67□□□□□ -1.34
NUP54-211ENST00000512151 SLC25A42Q86VD7 318 aa6.67□□□□□ -1.34
NUP54-211ENST00000512151 C12orf45Q8N5I9 185 aaPredicted RBP6.67□□□□□ -1.34
NUP54-211ENST00000512151 STPG3Q8N7X2 389 aa6.67□□□□□ -1.34
NUP54-211ENST00000512151 OR51H1Q8NH63 302 aa6.67□□□□□ -1.34
NUP54-211ENST00000512151 TCTEX1D2Q8WW35 142 aa6.67□□□□□ -1.34
NUP54-211ENST00000512151 TP53RKQ96S44 253 aa6.67□□□□□ -1.34
NUP54-211ENST00000512151 HSD17B10Q99714 261 aaKnown RBP6.67□□□□□ -1.34
NUP54-211ENST00000512151 C11orf68Q9H3H3 251 aaKnown RBP6.67□□□□□ -1.34
NUP54-211ENST00000512151 SLC35D1Q9NTN3 355 aa6.67□□□□□ -1.34
NUP54-211ENST00000512151 PRR13Q9NZ81 148 aa6.67□□□□□ -1.34
NUP54-211ENST00000512151 METTL1Q9UBP6 276 aaKnown RBP6.67□□□□□ -1.34
NUP54-211ENST00000512151 UBQLN2Q9UHD9 624 aa6.67□□□□□ -1.34
NUP54-211ENST00000512151 DMRT1Q9Y5R6 373 aa6.67□□□□□ -1.34
NUP54-211ENST00000512151 IGLV2-18A0A075B6J9 118 aa6.66□□□□□ -1.34
NUP54-211ENST00000512151 KIR2DL5BA0A0G2JN68 375 aa6.66□□□□□ -1.34
NUP54-211ENST00000512151 KIR2DL5BA0A0G2JPC4 375 aa6.66□□□□□ -1.34
NUP54-211ENST00000512151 CRYM-AS1A6NIL9 109 aa6.66□□□□□ -1.34
NUP54-211ENST00000512151 SRRM4A7MD48 611 aaKnown RBP6.66□□□□□ -1.34
NUP54-211ENST00000512151 HMSDA8MTL9 139 aa6.66□□□□□ -1.34
NUP54-211ENST00000512151 GOSR2O14653 212 aa6.66□□□□□ -1.34
NUP54-211ENST00000512151 IGKV1-39P01597 117 aa6.66□□□□□ -1.34
NUP54-211ENST00000512151 IGKV1D-39P04432 117 aa6.66□□□□□ -1.34
NUP54-211ENST00000512151 RBMY1A1P0DJD3 496 aaKnown RBP6.66□□□□□ -1.34
NUP54-211ENST00000512151 AKR1C4P17516 323 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms