RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 OR10C1Q96KK4 312 aa4.5□□□□□ -1.69
RNF4-217ENST00000511892 PRR25Q96S07 402 aa4.5□□□□□ -1.69
RNF4-217ENST00000511892 B9D2Q9BPU9 175 aa4.5□□□□□ -1.69
RNF4-217ENST00000511892 OR2D2Q9H210 308 aa4.5□□□□□ -1.69
RNF4-217ENST00000511892 CCL28Q9NRJ3 127 aa4.5□□□□□ -1.69
RNF4-217ENST00000511892 METTL1Q9UBP6 276 aaKnown RBP4.5□□□□□ -1.69
RNF4-217ENST00000511892 CACFD1Q9UGQ2 172 aa4.5□□□□□ -1.69
RNF4-217ENST00000511892 LSM4Q9Y4Z0 139 aaKnown RBP4.5□□□□□ -1.69
RNF4-217ENST00000511892 RBM7Q9Y580 266 aaKnown RBP4.5□□□□□ -1.69
RNF4-217ENST00000511892 SACSQ9NZJ4 4579 aa4.5□□□□□ -1.69
RNF4-217ENST00000511892 DNAH1Q9P2D7 4330 aa4.5□□□□□ -1.69
RNF4-217ENST00000511892 IGHV4OR15-8A0A075B7B6 117 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 A0A087WW49 117 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 IGKV1D-13A0A0B4J2D9 117 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 RPS10-NUDT3A0A1W2PQS6 291 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 LINC00473A8K010 186 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 FAM90A26D6RGX4 464 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 H0YIZ8 118 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 K7EPK0 472 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 SLC25A17O43808 307 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 RAMP3O60896 148 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 JTBO76095 146 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 SCAF4O95104 1147 aaKnown RBP4.49□□□□□ -1.69
RNF4-217ENST00000511892 SPDEFO95238 335 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 IGHV3-11P01762 117 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 APOA2P02652 100 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 LGALS1P09382 135 aaKnown RBP4.49□□□□□ -1.69
RNF4-217ENST00000511892 OR8U8P0C7N1 319 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 IGKV1-13P0DP09 117 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 RPL12P30050 165 aaKnown RBP4.49□□□□□ -1.69
RNF4-217ENST00000511892 DUTP33316 252 aaKnown RBP4.49□□□□□ -1.69
RNF4-217ENST00000511892 KIR2DS2P43631 304 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 NKX2-1P43699 371 aaPredicted RBP4.49□□□□□ -1.69
RNF4-217ENST00000511892 SLURP1P55000 103 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 S100A10P60903 97 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 RPS16P62249 146 aaKnown RBP4.49□□□□□ -1.69
RNF4-217ENST00000511892 PLGLAQ15195 96 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 SP6Q3SY56 376 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 LRRC37A5PQ49AS3 106 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 TMEM177Q53S58 311 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 NMSQ5H8A3 153 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 UNQ5815/PRO19632Q6UWF5 114 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 LYZL2Q7Z4W2 148 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 SLC35G3Q8N808 338 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 OR1S1Q8NH92 325 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 ABHD5Q8WTS1 349 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 DDB2Q92466 427 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 ARPC1AQ92747 370 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 DLX4Q92988 240 aaPredicted RBP4.49□□□□□ -1.69
RNF4-217ENST00000511892 FLYWCH2Q96CP2 140 aaKnown RBP4.49□□□□□ -1.69
RNF4-217ENST00000511892 RHOVQ96L33 236 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 MS4A10Q96PG2 267 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 TP53RKQ96S44 253 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 TSNAXQ99598 290 aaKnown RBP4.49□□□□□ -1.69
RNF4-217ENST00000511892 HSD17B10Q99714 261 aaKnown RBP4.49□□□□□ -1.69
RNF4-217ENST00000511892 ZNF471Q9BX82 626 aaPredicted RBP4.49□□□□□ -1.69
RNF4-217ENST00000511892 SLC25A31Q9H0C2 315 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 SLC35D1Q9NTN3 355 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 COA4Q9NYJ1 87 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 GSKIPQ9P0R6 139 aa4.49□□□□□ -1.69
RNF4-217ENST00000511892 FOXA2Q9Y261 457 aaPredicted RBP4.49□□□□□ -1.69
RNF4-217ENST00000511892 TENM2Q9NT68 2774 aa4.48□□□□□ -1.69
RNF4-217ENST00000511892 BORCS7-ASMTA0A0B4J1R7 106 aa4.48□□□□□ -1.69
RNF4-217ENST00000511892 MPTX1A8MV57 137 aa4.48□□□□□ -1.69
RNF4-217ENST00000511892 LINC01619G3V211 115 aa4.48□□□□□ -1.69
RNF4-217ENST00000511892 RBFOX2O43251 390 aaKnown RBP eCLIP4.48□□□□□ -1.69
RNF4-217ENST00000511892 CFDP00746 253 aaPredicted RBP4.48□□□□□ -1.69
RNF4-217ENST00000511892 IGLV2-14P01704 120 aa4.48□□□□□ -1.69
RNF4-217ENST00000511892 MBPP02686 304 aaPredicted RBP4.48□□□□□ -1.69
RNF4-217ENST00000511892 HSPB1P04792 205 aaKnown RBP4.48□□□□□ -1.69
RNF4-217ENST00000511892 RRASP10301 218 aa4.48□□□□□ -1.69
RNF4-217ENST00000511892 ADMP35318 185 aa4.48□□□□□ -1.69
RNF4-217ENST00000511892 LGALS7P47929 136 aa4.48□□□□□ -1.69
RNF4-217ENST00000511892 TPPP2P59282 170 aa4.48□□□□□ -1.69
RNF4-217ENST00000511892 TAS2R30P59541 319 aa4.48□□□□□ -1.69
RNF4-217ENST00000511892 ID3Q02535 119 aa4.48□□□□□ -1.69
RNF4-217ENST00000511892 CD69Q07108 199 aa4.48□□□□□ -1.69
RNF4-217ENST00000511892 BAXQ07812 192 aa4.48□□□□□ -1.69
RNF4-217ENST00000511892 TMEM267Q0VDI3 215 aaPredicted RBP4.48□□□□□ -1.69
RNF4-217ENST00000511892 FXYD3Q14802 87 aa4.48□□□□□ -1.69
RNF4-217ENST00000511892 LCE4AQ5TA78 99 aa4.48□□□□□ -1.69
RNF4-217ENST00000511892 BAP18Q8IXM2 172 aa4.48□□□□□ -1.69
RNF4-217ENST00000511892 SLC7A5P1Q8MH63 180 aa4.48□□□□□ -1.69
RNF4-217ENST00000511892 OR5T1Q8NG75 326 aa4.48□□□□□ -1.69
RNF4-217ENST00000511892 LHFPL5Q8TAF8 219 aa4.48□□□□□ -1.69
RNF4-217ENST00000511892 RRNAD1Q96FB5 475 aaKnown RBP4.48□□□□□ -1.69
RNF4-217ENST00000511892 HARBI1Q96MB7 349 aa4.48□□□□□ -1.69
RNF4-217ENST00000511892 RAB40CQ96S21 281 aa4.48□□□□□ -1.69
RNF4-217ENST00000511892 ZC4H2Q9NQZ6 224 aa4.48□□□□□ -1.69
RNF4-217ENST00000511892 PRR13Q9NZ81 148 aa4.48□□□□□ -1.69
RNF4-217ENST00000511892 OR5AC2Q9NZP5 309 aa4.48□□□□□ -1.69
RNF4-217ENST00000511892 ZMAT5Q9UDW3 170 aaKnown RBP4.48□□□□□ -1.69
RNF4-217ENST00000511892 PFDN2Q9UHV9 154 aa4.48□□□□□ -1.69
RNF4-217ENST00000511892 LSM5Q9Y4Y9 91 aaKnown RBP4.48□□□□□ -1.69
RNF4-217ENST00000511892 RYR2Q92736 4967 aa4.47□□□□□ -1.69
RNF4-217ENST00000511892 WRBO00258 174 aa4.47□□□□□ -1.69
RNF4-217ENST00000511892 OVOL1O14753 267 aa4.47□□□□□ -1.69
RNF4-217ENST00000511892 SHOXO15266 292 aa4.47□□□□□ -1.69
RNF4-217ENST00000511892 PITX3O75364 302 aa4.47□□□□□ -1.69
RNF4-217ENST00000511892 RBMXL2O75526 392 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms