RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 CHP2O43745 196 aa1.02□□□□□ -2.25
TRAPPC11-207ENST00000511409 OR5F1O95221 314 aa1.02□□□□□ -2.25
TRAPPC11-207ENST00000511409 IGKV1-5P01602 117 aa1.02□□□□□ -2.25
TRAPPC11-207ENST00000511409 RPS17P08708 135 aaKnown RBP1.02□□□□□ -2.25
TRAPPC11-207ENST00000511409 HIST1H1TP22492 207 aaPredicted RBP1.02□□□□□ -2.25
TRAPPC11-207ENST00000511409 OMPP47874 163 aa1.02□□□□□ -2.25
TRAPPC11-207ENST00000511409 ACOT6Q3I5F7 207 aaPredicted RBP1.02□□□□□ -2.25
TRAPPC11-207ENST00000511409 TRAPPC5Q8IUR0 188 aa1.02□□□□□ -2.25
TRAPPC11-207ENST00000511409 Q8N2B8 174 aa1.02□□□□□ -2.25
TRAPPC11-207ENST00000511409 CLDN22Q8N7P3 220 aa1.02□□□□□ -2.25
TRAPPC11-207ENST00000511409 OR13C4Q8NGS5 318 aa1.02□□□□□ -2.25
TRAPPC11-207ENST00000511409 PPP1R14BQ96C90 147 aa1.02□□□□□ -2.25
TRAPPC11-207ENST00000511409 SLC39A9Q9NUM3 307 aa1.02□□□□□ -2.25
TRAPPC11-207ENST00000511409 OR5AC2Q9NZP5 309 aa1.02□□□□□ -2.25
TRAPPC11-207ENST00000511409 TP73-AS1Q9UF72 201 aa1.02□□□□□ -2.25
TRAPPC11-207ENST00000511409 EXOC1LA0A1B0GW35 172 aa1.01□□□□□ -2.25
TRAPPC11-207ENST00000511409 RPP14O95059 124 aaKnown RBP1.01□□□□□ -2.25
TRAPPC11-207ENST00000511409 HTR1AP08908 422 aa1.01□□□□□ -2.25
TRAPPC11-207ENST00000511409 RPS20P60866 119 aaKnown RBP1.01□□□□□ -2.25
TRAPPC11-207ENST00000511409 UBE2IP63279 158 aaKnown RBP1.01□□□□□ -2.25
TRAPPC11-207ENST00000511409 ZNF846Q147U1 533 aa1.01□□□□□ -2.25
TRAPPC11-207ENST00000511409 KHDC3LQ587J8 217 aa1.01□□□□□ -2.25
TRAPPC11-207ENST00000511409 C10orf55Q5SWW7 151 aa1.01□□□□□ -2.25
TRAPPC11-207ENST00000511409 MIR17HGQ75NE6 70 aa1.01□□□□□ -2.25
TRAPPC11-207ENST00000511409 OR4E2Q8NGC2 313 aa1.01□□□□□ -2.25
TRAPPC11-207ENST00000511409 TOMM6Q96B49 74 aa1.01□□□□□ -2.25
TRAPPC11-207ENST00000511409 C8orf76Q96K31 380 aa1.01□□□□□ -2.25
TRAPPC11-207ENST00000511409 NIPSNAP1Q9BPW8 284 aa1.01□□□□□ -2.25
TRAPPC11-207ENST00000511409 UBAP1Q9NZ09 502 aa1.01□□□□□ -2.25
TRAPPC11-207ENST00000511409 SNURFQ9Y675 71 aa1.01□□□□□ -2.25
TRAPPC11-207ENST00000511409 TMEM56-RWDD3S4R434 201 aa1.01□□□□□ -2.25
TRAPPC11-207ENST00000511409 DOCK5Q9H7D0 1870 aa1.01□□□□□ -2.25
TRAPPC11-207ENST00000511409 WRNQ14191 1432 aaPredicted RBP eCLIP1□□□□□ -2.25
TRAPPC11-207ENST00000511409 MTUS2Q5JR59 1369 aa1□□□□□ -2.25
TRAPPC11-207ENST00000511409 IGKV1D-42A0A075B6H8 117 aa1□□□□□ -2.25
TRAPPC11-207ENST00000511409 IGKV2D-26A0A0A0MRZ7 120 aa1□□□□□ -2.25
TRAPPC11-207ENST00000511409 OR4C46A6NHA9 309 aa1□□□□□ -2.25
TRAPPC11-207ENST00000511409 GOLGA6L19H0YKK7 550 aa1□□□□□ -2.25
TRAPPC11-207ENST00000511409 IFNA10P01566 189 aa1□□□□□ -2.25
TRAPPC11-207ENST00000511409 CLPSP04118 112 aa1□□□□□ -2.25
TRAPPC11-207ENST00000511409 SHBGP04278 402 aa1□□□□□ -2.25
TRAPPC11-207ENST00000511409 SERPINA6P08185 405 aa1□□□□□ -2.25
TRAPPC11-207ENST00000511409 CRYGAP11844 174 aa1□□□□□ -2.25
TRAPPC11-207ENST00000511409 SPI1P17947 270 aa1□□□□□ -2.25
TRAPPC11-207ENST00000511409 FKBP2P26885 142 aaKnown RBP1□□□□□ -2.25
TRAPPC11-207ENST00000511409 C12orf29Q8N999 325 aa1□□□□□ -2.25
TRAPPC11-207ENST00000511409 OR5A1Q8NGJ0 315 aa1□□□□□ -2.25
TRAPPC11-207ENST00000511409 H1FXQ92522 213 aaKnown RBP1□□□□□ -2.25
TRAPPC11-207ENST00000511409 SLC50A1Q9BRV3 221 aa1□□□□□ -2.25
TRAPPC11-207ENST00000511409 TMEM147Q9BVK8 224 aa1□□□□□ -2.25
TRAPPC11-207ENST00000511409 V9GYY5 206 aaPredicted RBP1□□□□□ -2.25
TRAPPC11-207ENST00000511409 ARFGEF3Q5TH69 2177 aa1□□□□□ -2.25
TRAPPC11-207ENST00000511409 HELZ2Q9BYK8 2649 aaKnown RBP0.99□□□□□ -2.25
TRAPPC11-207ENST00000511409 A0A0D9SG52 128 aa0.99□□□□□ -2.25
TRAPPC11-207ENST00000511409 PQLC2LA1A4F0 135 aa0.99□□□□□ -2.25
TRAPPC11-207ENST00000511409 PIRO00625 290 aa0.99□□□□□ -2.25
TRAPPC11-207ENST00000511409 KRTAP10-4P60372 401 aaPredicted RBP0.99□□□□□ -2.25
TRAPPC11-207ENST00000511409 KRT222Q8N1A0 295 aa0.99□□□□□ -2.25
TRAPPC11-207ENST00000511409 ZNF565Q8N9K5 539 aa0.99□□□□□ -2.25
TRAPPC11-207ENST00000511409 OR8J2Q8NGG1 315 aa0.99□□□□□ -2.25
TRAPPC11-207ENST00000511409 OR4D11Q8NGI4 311 aa0.99□□□□□ -2.25
TRAPPC11-207ENST00000511409 TERB2Q8NHR7 220 aa0.99□□□□□ -2.25
TRAPPC11-207ENST00000511409 PFN4Q8NHR9 129 aa0.99□□□□□ -2.25
TRAPPC11-207ENST00000511409 AQP3Q92482 292 aa0.99□□□□□ -2.25
TRAPPC11-207ENST00000511409 CMSS1Q9BQ75 279 aaKnown RBP0.99□□□□□ -2.25
TRAPPC11-207ENST00000511409 CCDC90BQ9GZT6 254 aa0.99□□□□□ -2.25
TRAPPC11-207ENST00000511409 TRABDQ9H4I3 376 aa0.99□□□□□ -2.25
TRAPPC11-207ENST00000511409 MRPL27Q9P0M9 148 aaKnown RBP0.99□□□□□ -2.25
TRAPPC11-207ENST00000511409 ERGIC3Q9Y282 383 aa0.99□□□□□ -2.25
TRAPPC11-207ENST00000511409 MED12LQ86YW9 2145 aa0.98□□□□□ -2.25
TRAPPC11-207ENST00000511409 NUP155O75694 1391 aa0.98□□□□□ -2.25
TRAPPC11-207ENST00000511409 TRAV26-2A0A0B4J265 109 aa0.98□□□□□ -2.25
TRAPPC11-207ENST00000511409 FAM236DA0A1B0GTK5 79 aa0.98□□□□□ -2.25
TRAPPC11-207ENST00000511409 FADS1O60427 444 aa0.98□□□□□ -2.25
TRAPPC11-207ENST00000511409 FAM236CP0DP71 79 aa0.98□□□□□ -2.25
TRAPPC11-207ENST00000511409 S100A4P26447 101 aaKnown RBP0.98□□□□□ -2.25
TRAPPC11-207ENST00000511409 BRS3P32247 399 aa0.98□□□□□ -2.25
TRAPPC11-207ENST00000511409 AESQ08117 197 aa0.98□□□□□ -2.25
TRAPPC11-207ENST00000511409 PLCXD2Q0VAA5 305 aa0.98□□□□□ -2.25
TRAPPC11-207ENST00000511409 Q6ZQT0 140 aa0.98□□□□□ -2.25
TRAPPC11-207ENST00000511409 ZNF826PQ6ZT77 177 aa0.98□□□□□ -2.25
TRAPPC11-207ENST00000511409 DEFB128Q7Z7B8 93 aa0.98□□□□□ -2.25
TRAPPC11-207ENST00000511409 OOSP2Q86WS3 158 aa0.98□□□□□ -2.25
TRAPPC11-207ENST00000511409 HIST3H2BBQ8N257 126 aa0.98□□□□□ -2.25
TRAPPC11-207ENST00000511409 TSPAN32Q96QS1 320 aa0.98□□□□□ -2.25
TRAPPC11-207ENST00000511409 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.98□□□□□ -2.25
TRAPPC11-207ENST00000511409 RP1P56715 2156 aa0.98□□□□□ -2.25
TRAPPC11-207ENST00000511409 TOPBP1Q92547 1522 aa0.98□□□□□ -2.25
TRAPPC11-207ENST00000511409 FLG2Q5D862 2391 aaPredicted RBP0.97□□□□□ -2.25
TRAPPC11-207ENST00000511409 BUB1B-PAK6H3BSN5 160 aa0.97□□□□□ -2.25
TRAPPC11-207ENST00000511409 HCRTO43612 131 aa0.97□□□□□ -2.25
TRAPPC11-207ENST00000511409 CNIH1O95406 144 aa0.97□□□□□ -2.25
TRAPPC11-207ENST00000511409 TCL1BO95988 128 aa0.97□□□□□ -2.25
TRAPPC11-207ENST00000511409 TTRP02766 147 aa0.97□□□□□ -2.25
TRAPPC11-207ENST00000511409 ASAH2BP0C7U1 165 aa0.97□□□□□ -2.25
TRAPPC11-207ENST00000511409 MYL6P60660 151 aa0.97□□□□□ -2.25
TRAPPC11-207ENST00000511409 RHEBQ15382 184 aa0.97□□□□□ -2.25
TRAPPC11-207ENST00000511409 SPANXN5Q5MJ07 72 aa0.97□□□□□ -2.25
TRAPPC11-207ENST00000511409 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.97□□□□□ -2.25
TRAPPC11-207ENST00000511409 PHF13Q86YI8 300 aaPredicted RBP0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms