RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 FAM19A5Q7Z5A7 132 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P13-201ENST00000511263 BPIFA4PQ86YQ2 179 aa3.75□□□□□ -1.81
HMGB3P13-201ENST00000511263 APRG1Q8IVJ8 170 aa3.75□□□□□ -1.81
HMGB3P13-201ENST00000511263 ZNF695Q8IW36 515 aa3.75□□□□□ -1.81
HMGB3P13-201ENST00000511263 C10orf111Q8N326 155 aa3.75□□□□□ -1.81
HMGB3P13-201ENST00000511263 SPEM1Q8N4L4 309 aa3.75□□□□□ -1.81
HMGB3P13-201ENST00000511263 TMEM178AQ8NBL3 297 aa3.75□□□□□ -1.81
HMGB3P13-201ENST00000511263 OR51H1Q8NH63 302 aa3.75□□□□□ -1.81
HMGB3P13-201ENST00000511263 CLDND2Q8NHS1 167 aa3.75□□□□□ -1.81
HMGB3P13-201ENST00000511263 LSM10Q969L4 123 aaKnown RBP3.75□□□□□ -1.81
HMGB3P13-201ENST00000511263 RAB37Q96AX2 223 aa3.75□□□□□ -1.81
HMGB3P13-201ENST00000511263 ZNF501Q96CX3 271 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P13-201ENST00000511263 GPR21Q99679 349 aa3.75□□□□□ -1.81
HMGB3P13-201ENST00000511263 VGLL1Q99990 258 aa3.75□□□□□ -1.81
HMGB3P13-201ENST00000511263 C19orf24Q9BVV8 132 aa3.75□□□□□ -1.81
HMGB3P13-201ENST00000511263 PDFQ9HBH1 243 aa3.75□□□□□ -1.81
HMGB3P13-201ENST00000511263 ZNF581Q9P0T4 197 aa3.75□□□□□ -1.81
HMGB3P13-201ENST00000511263 YTHDF2Q9Y5A9 579 aaKnown RBP3.75□□□□□ -1.81
HMGB3P13-201ENST00000511263 LINC00312Q9Y6C7 94 aa3.75□□□□□ -1.81
HMGB3P13-201ENST00000511263 HELZP42694 1942 aaKnown RBP3.75□□□□□ -1.81
HMGB3P13-201ENST00000511263 DAPL1A0PJW8 107 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 C5orf49A4QMS7 147 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 OR4C46A6NHA9 309 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 MSGN1A6NI15 193 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 LRRC30A6NM36 301 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 H3BUT2 72 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 SOCS1O15524 211 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 PITX3O75364 302 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 DEDDO75618 318 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 WISP3O95389 354 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 ATP5G1P05496 136 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 CSN3P07498 182 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 SCTP09683 121 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 PPP1CCP36873 323 aaKnown RBP3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 ATP5G3P48201 142 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 RPL31P62899 125 aaKnown RBP3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 ATP5G2Q06055 141 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 TIGITQ495A1 244 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 LYRM7Q5U5X0 104 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 DMKNQ6E0U4 476 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 DUX4L9Q6RFH8 374 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 RASL11AQ6T310 242 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 FAM159AQ6UWV7 190 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 TMEM64Q6YI46 380 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 ZNF584Q8IVC4 421 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 TMEM256Q8N2U0 113 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 OR4X2Q8NGF9 303 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 OR10G7Q8NGN6 311 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 OR4C13Q8NGP0 309 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 OR10Q1Q8NGQ4 319 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 OR1L8Q8NGR8 309 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 ZNF563Q8TA94 476 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 SLC37A2Q8TED4 501 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 RTN4IP1Q8WWV3 396 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 RDH5Q92781 318 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 FGF11Q92914 225 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 RPEQ96AT9 228 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 CLDN23Q96B33 292 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 SMIM7Q9BQ49 75 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 CHST6Q9GZX3 395 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 SH3BGRL3Q9H299 93 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 NAA60Q9H7X0 242 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 PLEKHF2Q9H8W4 249 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 ISG20L2Q9H9L3 353 aaKnown RBP3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 HRASLS2Q9NWW9 162 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 IDI2-AS1Q9NZ38 188 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 PCTPQ9UKL6 214 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 RARRES3Q9UL19 164 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 CCL26Q9Y258 94 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 LTBP2Q14767 1821 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 MYO10Q9HD67 2058 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 MIA3Q5JRA6 1907 aa3.74□□□□□ -1.81
HMGB3P13-201ENST00000511263 GGTLC3B5MD39 225 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 H3BMG7 143 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 K7EQS6 105 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 NPFFO15130 113 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 ENSAO43768 121 aaKnown RBP3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 ATP5LO75964 103 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 WISP2O76076 250 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 APOMO95445 188 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 APOHP02749 345 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 CD3DP04234 171 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 KLK1P06870 262 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 C3orf79P0CE67 100 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 B4GALT1P15291 398 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 RPL7P18124 248 aaKnown RBP3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 GABRG2P18507 467 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 IL3RAP26951 378 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 BLVRBP30043 206 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 PRDX2P32119 198 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 CD70P32970 193 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 NKX2-1P43699 371 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 VDAC2P45880 294 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 HILS1P60008 231 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 UBE2G1P62253 170 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 TGFBR3Q03167 851 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 MEF2CQ06413 473 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 VWC2Q2TAL6 325 aa3.73□□□□□ -1.81
HMGB3P13-201ENST00000511263 TMEM52BQ4KMG9 183 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms