RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 COL6A6A6NMZ7 2263 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 APC2O95996 2303 aa1.54□□□□□ -2.16
PDE4D-218ENST00000509368 URB1O60287 2271 aaKnown RBP1.54□□□□□ -2.16
PDE4D-218ENST00000509368 A0A087WX48 190 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 IGHV2-26A0A0B4J1V2 119 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 LOC389332A0A1B0GUA5 103 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 TMEM269A0A1B0GVZ9 245 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 A0A1W2PRE2 83 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 RBFOX3A6NFN3 312 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 OR4C46A6NHA9 309 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 IFITM5A6NNB3 132 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 M0R143 59 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 M0R1X1 148 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 MFNGO00587 321 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 TCF21O43680 179 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 POP7O75817 140 aaKnown RBP1.53□□□□□ -2.16
PDE4D-218ENST00000509368 MUC1P15941 1255 aaPredicted RBP1.53□□□□□ -2.16
PDE4D-218ENST00000509368 HIST1H1DP16402 221 aaKnown RBP1.53□□□□□ -2.16
PDE4D-218ENST00000509368 GZMHP20718 246 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 AGTR1P30556 359 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 CTBP2P56545 445 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 RRAS2P62070 204 aaPredicted RBP1.53□□□□□ -2.16
PDE4D-218ENST00000509368 TMEM241Q24JQ0 296 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 MPV17L2Q567V2 206 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 C1orf195Q5TG92 126 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 SFXN4Q6P4A7 337 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 MORN3Q6PF18 240 aaPredicted RBP1.53□□□□□ -2.16
PDE4D-218ENST00000509368 SCGB1D4Q6XE38 83 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 LRP11Q86VZ4 500 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 CALHM3Q86XJ0 350 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 TGIF2LYQ8IUE0 185 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 C20orf196Q8IYI0 205 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 ZCCHC24Q8N2G6 241 aaKnown RBP1.53□□□□□ -2.16
PDE4D-218ENST00000509368 TMEM86BQ8N661 226 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 DRAM1Q8N682 238 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 KRTCAP2Q8N6L1 136 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 SLC25A29Q8N8R3 303 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 OR51H1Q8NH63 302 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 SFT2D1Q8WV19 159 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 CYGBQ8WWM9 190 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 MAGOHBQ96A72 148 aaKnown RBP1.53□□□□□ -2.16
PDE4D-218ENST00000509368 APOBEC3DQ96AK3 386 aaPredicted RBP1.53□□□□□ -2.16
PDE4D-218ENST00000509368 NEURL3Q96EH8 262 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 BMFQ96LC9 184 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 RNF157Q96PX1 679 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 SCN2AQ99250 2005 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 PKMYT1Q99640 499 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 MRPL20Q9BYC9 149 aaKnown RBP1.53□□□□□ -2.16
PDE4D-218ENST00000509368 CXCL16Q9H2A7 254 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 CACYBPQ9HB71 228 aaKnown RBP1.53□□□□□ -2.16
PDE4D-218ENST00000509368 TAF9BQ9HBM6 251 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 NAT8BQ9UHF3 227 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 BAZ2BQ9UIF8 2168 aaKnown RBP1.53□□□□□ -2.16
PDE4D-218ENST00000509368 TRAPPC2LQ9UL33 140 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 CCL26Q9Y258 94 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 KLF13Q9Y2Y9 288 aaPredicted RBP1.53□□□□□ -2.16
PDE4D-218ENST00000509368 TMEM14AQ9Y6G1 99 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 ENPP4Q9Y6X5 453 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 SHROOM3Q8TF72 1996 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 PIEZO2Q9H5I5 2752 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 PTPN13Q12923 2485 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 ACACAQ13085 2346 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 MYO9AB2RTY4 2548 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 ANAPC1Q9H1A4 1944 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 A0A087WUU8 490 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 CIB4A0PJX0 185 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 C20orf202A1L168 122 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 MEIS3P1A6NDR6 274 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 SIGLEC16A6NMB1 481 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 KRTAP9-6A8MVA2 160 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 J3KT08 172 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 GYG2O15488 501 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 MFSD11O43934 449 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 NDUFC2O95298 119 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 ADRA2AP08913 450 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 HIST1H1BP16401 226 aaKnown RBP1.53□□□□□ -2.16
PDE4D-218ENST00000509368 ZNF25P17030 456 aaPredicted RBP1.53□□□□□ -2.16
PDE4D-218ENST00000509368 ORM2P19652 201 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 RPS4Y1P22090 263 aaKnown RBP1.53□□□□□ -2.16
PDE4D-218ENST00000509368 IL3RAP26951 378 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 EVX1P49640 407 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 LHX2P50458 406 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 CRISP3P54108 245 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 AQP4P55087 323 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 PSG4Q00888 419 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 IFITM2Q01629 132 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 REG3AQ06141 175 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 LOXL1Q08397 574 aaPredicted RBP1.53□□□□□ -2.16
PDE4D-218ENST00000509368 SKP2Q13309 424 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 CDK10Q15131 360 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 RHEBQ15382 184 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 MRPL2Q5T653 305 aaKnown RBP1.53□□□□□ -2.16
PDE4D-218ENST00000509368 TMEM215Q68D42 235 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 TMPPEQ6ZT21 453 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 H1FOOQ8IZA3 346 aaPredicted RBP1.53□□□□□ -2.16
PDE4D-218ENST00000509368 LYG1Q8N1E2 194 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 TMEM86AQ8N2M4 240 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 LINC00337Q8N6G1 96 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 PACRGLQ8N7B6 248 aa1.53□□□□□ -2.16
PDE4D-218ENST00000509368 ZNF485Q8NCK3 441 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms