RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 SLC16A13Q7RTY0 426 aa11.94□□□□□ -0.5
PHF3-209ENST00000509330 BEND2Q8NDZ0 799 aa11.94□□□□□ -0.5
PHF3-209ENST00000509330 C8orf46Q8TAG6 207 aa11.94□□□□□ -0.5
PHF3-209ENST00000509330 TVP23CQ96ET8 276 aa11.94□□□□□ -0.5
PHF3-209ENST00000509330 C11orf94C9JXX5 98 aa11.94□□□□□ -0.5
PHF3-209ENST00000509330 RAB31Q13636 194 aa11.94□□□□□ -0.5
PHF3-209ENST00000509330 NPIPB3Q92617 1050 aa11.94□□□□□ -0.5
PHF3-209ENST00000509330 NRGNQ92686 78 aa11.94□□□□□ -0.5
PHF3-209ENST00000509330 SMIM7Q9BQ49 75 aa11.94□□□□□ -0.5
PHF3-209ENST00000509330 SMDT1Q9H4I9 107 aa11.94□□□□□ -0.5
PHF3-209ENST00000509330 SIGLEC9Q9Y336 463 aa11.94□□□□□ -0.5
PHF3-209ENST00000509330 OR2C1O95371 312 aa11.94□□□□□ -0.5
PHF3-209ENST00000509330 CD69Q07108 199 aa11.94□□□□□ -0.5
PHF3-209ENST00000509330 ADIRFQ15847 76 aa11.94□□□□□ -0.5
PHF3-209ENST00000509330 PRSS8Q16651 343 aa11.94□□□□□ -0.5
PHF3-209ENST00000509330 DYNAPQ8N1N2 210 aa11.94□□□□□ -0.5
PHF3-209ENST00000509330 TNFRSF14Q92956 283 aa11.94□□□□□ -0.5
PHF3-209ENST00000509330 MOSP00540 346 aa11.93□□□□□ -0.5
PHF3-209ENST00000509330 RPL27AP46776 148 aaKnown RBP11.93□□□□□ -0.5
PHF3-209ENST00000509330 LGALS7P47929 136 aa11.93□□□□□ -0.5
PHF3-209ENST00000509330 EFNA4P52798 201 aa11.93□□□□□ -0.5
PHF3-209ENST00000509330 ZNF90Q03938 601 aa11.93□□□□□ -0.5
PHF3-209ENST00000509330 TPTE2P1Q5T6R2 138 aa11.93□□□□□ -0.5
PHF3-209ENST00000509330 SPNS3Q6ZMD2 512 aa11.93□□□□□ -0.5
PHF3-209ENST00000509330 DERL1Q9BUN8 251 aa11.93□□□□□ -0.5
PHF3-209ENST00000509330 GSX1Q9H4S2 264 aaPredicted RBP11.93□□□□□ -0.5
PHF3-209ENST00000509330 A0A1W2PN81 502 aa11.93□□□□□ -0.5
PHF3-209ENST00000509330 CHRNA7P36544 502 aa11.93□□□□□ -0.5
PHF3-209ENST00000509330 PPP1R27Q86WC6 154 aa11.93□□□□□ -0.5
PHF3-209ENST00000509330 HIST1H2BAQ96A08 127 aa11.93□□□□□ -0.5
PHF3-209ENST00000509330 DPM3Q9P2X0 92 aa11.93□□□□□ -0.5
PHF3-209ENST00000509330 AMMECR1Q9Y4X0 333 aaPredicted RBP11.93□□□□□ -0.5
PHF3-209ENST00000509330 IGHV3OR16-10A0A075B7F0 116 aa11.92□□□□□ -0.5
PHF3-209ENST00000509330 CNIH1O95406 144 aa11.92□□□□□ -0.5
PHF3-209ENST00000509330 OR10J4P0C629 311 aa11.92□□□□□ -0.5
PHF3-209ENST00000509330 HNF1AP20823 631 aa11.92□□□□□ -0.5
PHF3-209ENST00000509330 RHEBQ15382 184 aa11.92□□□□□ -0.5
PHF3-209ENST00000509330 SLC35E1Q96K37 410 aa11.92□□□□□ -0.5
PHF3-209ENST00000509330 PARLQ9H300 379 aa11.92□□□□□ -0.5
PHF3-209ENST00000509330 PGPEP1LA6NFU8 196 aa11.92□□□□□ -0.5
PHF3-209ENST00000509330 VENTXO95231 258 aa11.92□□□□□ -0.5
PHF3-209ENST00000509330 RND2P52198 227 aa11.92□□□□□ -0.5
PHF3-209ENST00000509330 MFAP2P55001 183 aa11.92□□□□□ -0.5
PHF3-209ENST00000509330 CLEC12BQ2HXU8 276 aa11.92□□□□□ -0.5
PHF3-209ENST00000509330 BSXQ3C1V8 233 aa11.92□□□□□ -0.5
PHF3-209ENST00000509330 TMEM144Q7Z5S9 345 aa11.92□□□□□ -0.5
PHF3-209ENST00000509330 UHRF2Q96PU4 802 aa11.92□□□□□ -0.5
PHF3-209ENST00000509330 SSX3Q99909 188 aa11.92□□□□□ -0.5
PHF3-209ENST00000509330 IGLC7A0M8Q6 106 aa11.91□□□□□ -0.5
PHF3-209ENST00000509330 TMEM8BA6NDV4 472 aa11.91□□□□□ -0.5
PHF3-209ENST00000509330 LINC00869P0C866 280 aa11.91□□□□□ -0.5
PHF3-209ENST00000509330 NECAP1Q8NC96 275 aa11.91□□□□□ -0.5
PHF3-209ENST00000509330 SAV1Q9H4B6 383 aaPredicted RBP11.91□□□□□ -0.5
PHF3-209ENST00000509330 S4R3C0 116 aa11.91□□□□□ -0.5
PHF3-209ENST00000509330 SEC14L6B5MCN3 397 aa11.91□□□□□ -0.5
PHF3-209ENST00000509330 LY6LH3BQJ8 138 aa11.91□□□□□ -0.5
PHF3-209ENST00000509330 IGHV4-39P01824 125 aa11.91□□□□□ -0.5
PHF3-209ENST00000509330 NPPCP23582 126 aa11.91□□□□□ -0.5
PHF3-209ENST00000509330 MMD2Q8IY49 270 aa11.91□□□□□ -0.5
PHF3-209ENST00000509330 OR4A5Q8NH83 315 aa11.91□□□□□ -0.5
PHF3-209ENST00000509330 SLC45A2Q9UMX9 530 aa11.91□□□□□ -0.5
PHF3-209ENST00000509330 TRAV5A0A0B4J249 113 aa11.91□□□□□ -0.5
PHF3-209ENST00000509330 A1L4Q6 167 aa11.91□□□□□ -0.5
PHF3-209ENST00000509330 IGHV2-5P01817 119 aa11.91□□□□□ -0.5
PHF3-209ENST00000509330 PRR20EP86478 221 aa11.91□□□□□ -0.5
PHF3-209ENST00000509330 PRR20CP86479 221 aa11.91□□□□□ -0.5
PHF3-209ENST00000509330 PRR20DP86480 221 aa11.91□□□□□ -0.5
PHF3-209ENST00000509330 PRR20BP86481 221 aa11.91□□□□□ -0.5
PHF3-209ENST00000509330 PRR20AP86496 221 aa11.91□□□□□ -0.5
PHF3-209ENST00000509330 MORN5Q5VZ52 161 aa11.91□□□□□ -0.5
PHF3-209ENST00000509330 SLC25A33Q9BSK2 321 aa11.91□□□□□ -0.5
PHF3-209ENST00000509330 NCBP2LA6PVI3 153 aaKnown RBP11.9□□□□□ -0.5
PHF3-209ENST00000509330 OR7C2O60412 319 aa11.9□□□□□ -0.5
PHF3-209ENST00000509330 FSTL3O95633 263 aa11.9□□□□□ -0.5
PHF3-209ENST00000509330 PRTN3P24158 256 aa11.9□□□□□ -0.5
PHF3-209ENST00000509330 RPL29P47914 159 aaKnown RBP11.9□□□□□ -0.5
PHF3-209ENST00000509330 SRSF12Q8WXF0 261 aaKnown RBP11.9□□□□□ -0.5
PHF3-209ENST00000509330 STAG3L2P0CL84 134 aa11.9□□□□□ -0.5
PHF3-209ENST00000509330 STAG3L3P0CL85 134 aa11.9□□□□□ -0.5
PHF3-209ENST00000509330 KLF17Q5JT82 389 aaPredicted RBP11.9□□□□□ -0.5
PHF3-209ENST00000509330 TEX45Q8NA69 505 aa11.9□□□□□ -0.5
PHF3-209ENST00000509330 MANBALQ9NQG1 85 aa11.9□□□□□ -0.5
PHF3-209ENST00000509330 YTHDF2Q9Y5A9 579 aaKnown RBP11.9□□□□□ -0.5
PHF3-209ENST00000509330 NDUFB4O95168 129 aa11.89□□□□□ -0.51
PHF3-209ENST00000509330 RBP4P02753 201 aa11.89□□□□□ -0.51
PHF3-209ENST00000509330 COMPP49747 757 aaPredicted RBP11.89□□□□□ -0.51
PHF3-209ENST00000509330 RHOBP62745 196 aa11.89□□□□□ -0.51
PHF3-209ENST00000509330 SMUG1Q53HV7 270 aa11.89□□□□□ -0.51
PHF3-209ENST00000509330 USP9YO00507 2555 aaPredicted RBP11.89□□□□□ -0.51
PHF3-209ENST00000509330 HOXB4P17483 251 aaPredicted RBP11.89□□□□□ -0.51
PHF3-209ENST00000509330 C15orf54Q8N8G6 183 aa11.89□□□□□ -0.51
PHF3-209ENST00000509330 OR11H6Q8NGC7 330 aa11.89□□□□□ -0.51
PHF3-209ENST00000509330 TMEM37Q8WXS4 190 aa11.89□□□□□ -0.51
PHF3-209ENST00000509330 ABCA12Q86UK0 2595 aa11.89□□□□□ -0.51
PHF3-209ENST00000509330 TGIF2-C20orf24A0A0A6YYL0 155 aa11.88□□□□□ -0.51
PHF3-209ENST00000509330 SCO2A0A1W2PP80 73 aa11.88□□□□□ -0.51
PHF3-209ENST00000509330 CXorf1O96002 111 aa11.88□□□□□ -0.51
PHF3-209ENST00000509330 CRYGBP07316 175 aa11.88□□□□□ -0.51
PHF3-209ENST00000509330 SUB1P53999 127 aaKnown RBP eCLIP11.88□□□□□ -0.51
PHF3-209ENST00000509330 RNF212Q495C1 297 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms