RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 KLF5Q13887 457 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 BSXQ3C1V8 233 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 ACSM6Q6P461 480 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 UNQ9165/PRO28630Q6UXU0 137 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 FAM223AQ8IWN6 122 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 ZNF114Q8NC26 417 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 OR1L8Q8NGR8 309 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 CACNG8Q8WXS5 425 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 LSM10Q969L4 123 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 GALNT14Q96FL9 552 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 TMEM68Q96MH6 324 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 TMEM56Q96MV1 263 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 ZC4H2Q9NQZ6 224 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 ZNF355PQ9NSJ1 428 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 MCUBQ9NWR8 336 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 COPZ2Q9P299 210 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 TMEM56-RWDD3S4R434 201 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 STAB2Q8WWQ8 2551 aa5.47□□□□□ -1.53
TOPBP1-207ENST00000509162 A0A087WWL8 130 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 TEX13DA0A0J9YY54 714 aaPredicted RBP5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 LINC00854A0A1B0GVQ3 168 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 TMEM213A2RRL7 107 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 MPTX1A8MV57 137 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 OVOL1O14753 267 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 NDUFB6O95139 128 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 IGHV3-48P01763 117 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 SERPINE2P07093 398 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 CSN3P07498 182 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 TRAPPC2P0DI81 140 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 TRAPPC2BP0DI82 140 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 RNASE2P10153 161 aaKnown RBP5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 ANXA7P20073 488 aaKnown RBP5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 S100A5P33763 92 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 SYNJ2BPP57105 145 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 ERVK-16P61578 105 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 TMEM268Q5VZI3 342 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 LPCAT3Q6P1A2 487 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 CLEC19AQ6UXS0 136 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 LYZL2Q7Z4W2 148 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 TMED4Q7Z7H5 227 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 ZNF429Q86V71 674 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 TOMM5Q8N4H5 51 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 CCDC71LQ8N9Z2 235 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 NECAP1Q8NC96 275 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 OR5B3Q8NH48 314 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 ZFAND1Q8TCF1 268 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 RBPMSQ93062 196 aaKnown RBP5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 BORCS5Q969J3 196 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 SRSF8Q9BRL6 282 aaKnown RBP5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 CHRDL1Q9BU40 450 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 HINT2Q9BX68 163 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 FNDC4Q9H6D8 234 aaPredicted RBP5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 FAM30AQ9NZY2 134 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 PEF1Q9UBV8 284 aaKnown RBP5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 CACNG5Q9UF02 275 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 PRNDQ9UKY0 176 aa5.46□□□□□ -1.54
TOPBP1-207ENST00000509162 C13orf42A0A1B0GVH6 325 aa5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 INS-IGF2F8WCM5 200 aa5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 J3KRW8 73 aa5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 PITX3O75364 302 aa5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 ACTL6BO94805 426 aa5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 IGLV1-51P01701 117 aa5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 MED14OSP0DP75 135 aa5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 SPNP16150 400 aa5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 GPR183P32249 361 aa5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 AKR1C2P52895 323 aa5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 UBE2MP61081 183 aaKnown RBP5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 HSPE1P61604 102 aaKnown RBP5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 SRSF3P84103 164 aaKnown RBP5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 TRIM16LQ309B1 348 aa5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 SPANXN2Q5MJ10 180 aa5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 ZNF57Q68EA5 555 aaPredicted RBP5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 H2BFWTQ7Z2G1 175 aa5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 NUDT10Q8NFP7 164 aa5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 OR52B4Q8NGK2 314 aa5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 NUDT11Q96G61 164 aa5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 USMG5Q96IX5 58 aa5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 COMMD5Q9GZQ3 224 aa5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 PTTG2Q9NZH5 202 aa5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 NDUFA13Q9P0J0 144 aa5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 C14orf166Q9Y224 244 aaKnown RBP5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 LSM4Q9Y4Z0 139 aaKnown RBP5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 VPS13DQ5THJ4 4388 aa5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 CSMD3Q7Z407 3707 aa5.45□□□□□ -1.54
TOPBP1-207ENST00000509162 IGHV3-35A0A0C4DH35 117 aa5.44□□□□□ -1.54
TOPBP1-207ENST00000509162 A8MWP6 167 aa5.44□□□□□ -1.54
TOPBP1-207ENST00000509162 OR2C1O95371 312 aa5.44□□□□□ -1.54
TOPBP1-207ENST00000509162 SFT2D2O95562 160 aa5.44□□□□□ -1.54
TOPBP1-207ENST00000509162 AKR1C4P17516 323 aa5.44□□□□□ -1.54
TOPBP1-207ENST00000509162 ATP5G2Q06055 141 aa5.44□□□□□ -1.54
TOPBP1-207ENST00000509162 GAGE13Q4V321 117 aa5.44□□□□□ -1.54
TOPBP1-207ENST00000509162 C9orf66Q5T8R8 295 aa5.44□□□□□ -1.54
TOPBP1-207ENST00000509162 TRIQKQ629K1 86 aa5.44□□□□□ -1.54
TOPBP1-207ENST00000509162 THOC7Q6I9Y2 204 aaKnown RBP5.44□□□□□ -1.54
TOPBP1-207ENST00000509162 SLC25A42Q86VD7 318 aa5.44□□□□□ -1.54
TOPBP1-207ENST00000509162 LRTM2Q8N967 370 aa5.44□□□□□ -1.54
TOPBP1-207ENST00000509162 OR9G4Q8NGQ1 327 aa5.44□□□□□ -1.54
TOPBP1-207ENST00000509162 OR1P1Q8NH06 330 aa5.44□□□□□ -1.54
TOPBP1-207ENST00000509162 SCARB1Q8WTV0 552 aa5.44□□□□□ -1.54
TOPBP1-207ENST00000509162 IL22RA2Q969J5 263 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms