RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 SLC35G3Q8N808 338 aa11.1□□□□□ -0.63
UBE2D3-228ENST00000508974 OR4C16Q8NGL9 310 aa11.1□□□□□ -0.63
UBE2D3-228ENST00000508974 MARC2Q969Z3 335 aa11.1□□□□□ -0.63
UBE2D3-228ENST00000508974 DAZ1Q9NQZ3 744 aaKnown RBP11.1□□□□□ -0.63
UBE2D3-228ENST00000508974 C14orf166Q9Y224 244 aaKnown RBP11.1□□□□□ -0.63
UBE2D3-228ENST00000508974 RYR3Q15413 4870 aa11.1□□□□□ -0.63
UBE2D3-228ENST00000508974 IGHV3-49A0A0A0MS15 119 aa11.09□□□□□ -0.63
UBE2D3-228ENST00000508974 A0A0B4J293 547 aa11.09□□□□□ -0.63
UBE2D3-228ENST00000508974 A0A0G2JRQ6 117 aa11.09□□□□□ -0.63
UBE2D3-228ENST00000508974 TEX13DA0A0J9YY54 714 aaPredicted RBP11.09□□□□□ -0.63
UBE2D3-228ENST00000508974 DISC1C4P0D8 188 aa11.09□□□□□ -0.63
UBE2D3-228ENST00000508974 I3L2K1 104 aa11.09□□□□□ -0.63
UBE2D3-228ENST00000508974 NDUFA4O00483 81 aa11.09□□□□□ -0.63
UBE2D3-228ENST00000508974 YIF1AO95070 293 aa11.09□□□□□ -0.63
UBE2D3-228ENST00000508974 CTSDP07339 412 aaPredicted RBP11.09□□□□□ -0.63
UBE2D3-228ENST00000508974 AKAIN1P0CW23 69 aa11.09□□□□□ -0.63
UBE2D3-228ENST00000508974 C8orf88P0DMB2 117 aa11.09□□□□□ -0.63
UBE2D3-228ENST00000508974 ETV6P41212 452 aa11.09□□□□□ -0.63
UBE2D3-228ENST00000508974 RPL5P46777 297 aaKnown RBP11.09□□□□□ -0.63
UBE2D3-228ENST00000508974 ELLP55199 621 aaPredicted RBP11.09□□□□□ -0.63
UBE2D3-228ENST00000508974 MRPS10P82664 201 aaKnown RBP11.09□□□□□ -0.63
UBE2D3-228ENST00000508974 ERHP84090 104 aaKnown RBP11.09□□□□□ -0.63
UBE2D3-228ENST00000508974 MEF2DQ14814 521 aa11.09□□□□□ -0.63
UBE2D3-228ENST00000508974 LINC00322Q6ZN03 302 aaPredicted RBP11.09□□□□□ -0.63
UBE2D3-228ENST00000508974 ISOC1Q96CN7 298 aa11.09□□□□□ -0.63
UBE2D3-228ENST00000508974 PDCD10Q9BUL8 212 aa11.09□□□□□ -0.63
UBE2D3-228ENST00000508974 UBQLN2Q9UHD9 624 aa11.09□□□□□ -0.63
UBE2D3-228ENST00000508974 ATG12O94817 140 aa11.08□□□□□ -0.64
UBE2D3-228ENST00000508974 CTSGP08311 255 aa11.08□□□□□ -0.64
UBE2D3-228ENST00000508974 OR5AC1P0C628 307 aa11.08□□□□□ -0.64
UBE2D3-228ENST00000508974 P0C879 139 aa11.08□□□□□ -0.64
UBE2D3-228ENST00000508974 SNCAP37840 140 aa11.08□□□□□ -0.64
UBE2D3-228ENST00000508974 HOXA1P49639 335 aaPredicted RBP11.08□□□□□ -0.64
UBE2D3-228ENST00000508974 MFAP4P55083 255 aa11.08□□□□□ -0.64
UBE2D3-228ENST00000508974 SSBP1Q04837 148 aaKnown RBP11.08□□□□□ -0.64
UBE2D3-228ENST00000508974 ZNF114Q8NC26 417 aa11.08□□□□□ -0.64
UBE2D3-228ENST00000508974 RRNAD1Q96FB5 475 aaKnown RBP11.08□□□□□ -0.64
UBE2D3-228ENST00000508974 BCL7BQ9BQE9 202 aa11.08□□□□□ -0.64
UBE2D3-228ENST00000508974 HIPK2Q9H2X6 1198 aa11.08□□□□□ -0.64
UBE2D3-228ENST00000508974 EDA2RQ9HAV5 297 aa11.08□□□□□ -0.64
UBE2D3-228ENST00000508974 IGHV3OR16-13A0A075B7E8 117 aa11.07□□□□□ -0.64
UBE2D3-228ENST00000508974 IGHV3-74A0A0B4J1X5 117 aa11.07□□□□□ -0.64
UBE2D3-228ENST00000508974 NUPL2O15504 423 aaKnown RBP11.07□□□□□ -0.64
UBE2D3-228ENST00000508974 GNG7O60262 68 aa11.07□□□□□ -0.64
UBE2D3-228ENST00000508974 UCP1P25874 307 aa11.07□□□□□ -0.64
UBE2D3-228ENST00000508974 ANKRD55Q3KP44 614 aa11.07□□□□□ -0.64
UBE2D3-228ENST00000508974 OR51S1Q8NGJ8 323 aa11.07□□□□□ -0.64
UBE2D3-228ENST00000508974 MCFD2Q8NI22 146 aa11.07□□□□□ -0.64
UBE2D3-228ENST00000508974 LHFPL5Q8TAF8 219 aa11.07□□□□□ -0.64
UBE2D3-228ENST00000508974 ZNF414Q96IQ9 312 aa11.07□□□□□ -0.64
UBE2D3-228ENST00000508974 RTBDNQ9BSG5 229 aaPredicted RBP11.07□□□□□ -0.64
UBE2D3-228ENST00000508974 SLIRPQ9GZT3 109 aaKnown RBP11.07□□□□□ -0.64
UBE2D3-228ENST00000508974 C5orf66Q9H5L9 145 aa11.07□□□□□ -0.64
UBE2D3-228ENST00000508974 NAA60Q9H7X0 242 aa11.07□□□□□ -0.64
UBE2D3-228ENST00000508974 GAR1Q9NY12 217 aaKnown RBP11.07□□□□□ -0.64
UBE2D3-228ENST00000508974 PRR13Q9NZ81 148 aa11.07□□□□□ -0.64
UBE2D3-228ENST00000508974 TRAV25A0A0B4J276 109 aa11.06□□□□□ -0.64
UBE2D3-228ENST00000508974 CCDC160A6NGH7 325 aa11.06□□□□□ -0.64
UBE2D3-228ENST00000508974 CTDSPLO15194 276 aa11.06□□□□□ -0.64
UBE2D3-228ENST00000508974 NXPH3O95157 252 aa11.06□□□□□ -0.64
UBE2D3-228ENST00000508974 TNFSF8P32971 234 aa11.06□□□□□ -0.64
UBE2D3-228ENST00000508974 RELQ04864 619 aaPredicted RBP11.06□□□□□ -0.64
UBE2D3-228ENST00000508974 ATP6V0BQ99437 205 aa11.06□□□□□ -0.64
UBE2D3-228ENST00000508974 TMEM222Q9H0R3 208 aa11.06□□□□□ -0.64
UBE2D3-228ENST00000508974 ENY2Q9NPA8 101 aa11.06□□□□□ -0.64
UBE2D3-228ENST00000508974 MCUBQ9NWR8 336 aa11.06□□□□□ -0.64
UBE2D3-228ENST00000508974 CSMD3Q7Z407 3707 aa11.05□□□□□ -0.64
UBE2D3-228ENST00000508974 IGKV3-7A0A075B6H7 116 aa11.05□□□□□ -0.64
UBE2D3-228ENST00000508974 ANKRD20A5PA0PJZ0 165 aa11.05□□□□□ -0.64
UBE2D3-228ENST00000508974 FABP12A6NFH5 140 aa11.05□□□□□ -0.64
UBE2D3-228ENST00000508974 TFPI2P48307 235 aa11.05□□□□□ -0.64
UBE2D3-228ENST00000508974 TMEM268Q5VZI3 342 aa11.05□□□□□ -0.64
UBE2D3-228ENST00000508974 LAMTOR1Q6IAA8 161 aa11.05□□□□□ -0.64
UBE2D3-228ENST00000508974 Q6ZRM9 215 aa11.05□□□□□ -0.64
UBE2D3-228ENST00000508974 GLYATL2Q8WU03 294 aa11.05□□□□□ -0.64
UBE2D3-228ENST00000508974 SPAG8Q99932 426 aaPredicted RBP11.05□□□□□ -0.64
UBE2D3-228ENST00000508974 PRRT1Q99946 306 aa11.05□□□□□ -0.64
UBE2D3-228ENST00000508974 NXF2Q9GZY0 626 aaKnown RBP11.05□□□□□ -0.64
UBE2D3-228ENST00000508974 IGHV7-4-1A0A0J9YVY3 117 aa11.04□□□□□ -0.64
UBE2D3-228ENST00000508974 CRYM-AS1A6NIL9 109 aa11.04□□□□□ -0.64
UBE2D3-228ENST00000508974 C15orf62A8K5M9 175 aa11.04□□□□□ -0.64
UBE2D3-228ENST00000508974 K7EMT4 169 aa11.04□□□□□ -0.64
UBE2D3-228ENST00000508974 TSPAN4O14817 238 aa11.04□□□□□ -0.64
UBE2D3-228ENST00000508974 GSTZ1O43708 216 aaPredicted RBP11.04□□□□□ -0.64
UBE2D3-228ENST00000508974 CDS2O95674 445 aa11.04□□□□□ -0.64
UBE2D3-228ENST00000508974 RNASE2P10153 161 aaKnown RBP11.04□□□□□ -0.64
UBE2D3-228ENST00000508974 SURF2Q15527 256 aaPredicted RBP11.04□□□□□ -0.64
UBE2D3-228ENST00000508974 SELENOHQ8IZQ5 122 aaKnown RBP11.04□□□□□ -0.64
UBE2D3-228ENST00000508974 TMEM116Q8NCL8 245 aa11.04□□□□□ -0.64
UBE2D3-228ENST00000508974 DUSP18Q8NEJ0 188 aa11.04□□□□□ -0.64
UBE2D3-228ENST00000508974 RBPMSQ93062 196 aaKnown RBP11.04□□□□□ -0.64
UBE2D3-228ENST00000508974 RNF2Q99496 336 aa11.04□□□□□ -0.64
UBE2D3-228ENST00000508974 TXN2Q99757 166 aa11.04□□□□□ -0.64
UBE2D3-228ENST00000508974 GGTLC1Q9BX51 225 aa11.04□□□□□ -0.64
UBE2D3-228ENST00000508974 RSL24D1Q9UHA3 163 aaKnown RBP11.04□□□□□ -0.64
UBE2D3-228ENST00000508974 SMPXQ9UHP9 88 aa11.04□□□□□ -0.64
UBE2D3-228ENST00000508974 GPR132Q9UNW8 380 aa11.04□□□□□ -0.64
UBE2D3-228ENST00000508974 LOC102724200A0A096LPH7 203 aaPredicted RBP11.03□□□□□ -0.64
UBE2D3-228ENST00000508974 B3GALNT1O75752 331 aa11.03□□□□□ -0.64
UBE2D3-228ENST00000508974 OPRK1P41145 380 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms