RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 LCE2CQ5TA81 110 aa7.06□□□□□ -1.28
NUP54-207ENST00000508583 SPSB3Q6PJ21 355 aa7.06□□□□□ -1.28
NUP54-207ENST00000508583 DUSP18Q8NEJ0 188 aa7.06□□□□□ -1.28
NUP54-207ENST00000508583 MITD1Q8WV92 249 aa7.06□□□□□ -1.28
NUP54-207ENST00000508583 FANCD2OSQ96PS1 177 aa7.06□□□□□ -1.28
NUP54-207ENST00000508583 PALMDQ9NP74 551 aa7.06□□□□□ -1.28
NUP54-207ENST00000508583 HSPB7Q9UBY9 170 aa7.06□□□□□ -1.28
NUP54-207ENST00000508583 U3KQ87 197 aa7.06□□□□□ -1.28
NUP54-207ENST00000508583 NOTCH3Q9UM47 2321 aa7.06□□□□□ -1.28
NUP54-207ENST00000508583 ANKRD34BA5PLL1 514 aa7.05□□□□□ -1.28
NUP54-207ENST00000508583 OVOL1O14753 267 aa7.05□□□□□ -1.28
NUP54-207ENST00000508583 HOXB5P09067 269 aa7.05□□□□□ -1.28
NUP54-207ENST00000508583 DCTN2Q13561 401 aaKnown RBP7.05□□□□□ -1.28
NUP54-207ENST00000508583 ETFRF1Q6IPR1 90 aa7.05□□□□□ -1.28
NUP54-207ENST00000508583 Q6ZRM9 215 aa7.05□□□□□ -1.28
NUP54-207ENST00000508583 SLC24A4Q8NFF2 622 aa7.05□□□□□ -1.28
NUP54-207ENST00000508583 RNASEH2CQ8TDP1 164 aaKnown RBP7.05□□□□□ -1.28
NUP54-207ENST00000508583 DTD1Q8TEA8 209 aa7.05□□□□□ -1.28
NUP54-207ENST00000508583 ZNF431Q8TF32 576 aaPredicted RBP7.05□□□□□ -1.28
NUP54-207ENST00000508583 MISP3Q96FF7 219 aa7.05□□□□□ -1.28
NUP54-207ENST00000508583 BSCL2Q96G97 398 aaPredicted RBP7.05□□□□□ -1.28
NUP54-207ENST00000508583 DUX3Q96PT4 197 aa7.05□□□□□ -1.28
NUP54-207ENST00000508583 TXN2Q99757 166 aa7.05□□□□□ -1.28
NUP54-207ENST00000508583 C21orf62Q9NYP8 219 aa7.05□□□□□ -1.28
NUP54-207ENST00000508583 PRR13Q9NZ81 148 aa7.05□□□□□ -1.28
NUP54-207ENST00000508583 PEMTQ9UBM1 199 aa7.05□□□□□ -1.28
NUP54-207ENST00000508583 MEGF8Q7Z7M0 2845 aa7.05□□□□□ -1.28
NUP54-207ENST00000508583 SEC14L6B5MCN3 397 aa7.04□□□□□ -1.28
NUP54-207ENST00000508583 WRBO00258 174 aa7.04□□□□□ -1.28
NUP54-207ENST00000508583 NUPL2O15504 423 aaKnown RBP7.04□□□□□ -1.28
NUP54-207ENST00000508583 NDUFB8O95169 186 aa7.04□□□□□ -1.28
NUP54-207ENST00000508583 PTTG1O95997 202 aa7.04□□□□□ -1.28
NUP54-207ENST00000508583 IL5P05113 134 aa7.04□□□□□ -1.28
NUP54-207ENST00000508583 ARL3P36405 182 aa7.04□□□□□ -1.28
NUP54-207ENST00000508583 OPRK1P41145 380 aa7.04□□□□□ -1.28
NUP54-207ENST00000508583 MFAP4P55083 255 aa7.04□□□□□ -1.28
NUP54-207ENST00000508583 RELQ04864 619 aaPredicted RBP7.04□□□□□ -1.28
NUP54-207ENST00000508583 FAM106AQ4KMX7 169 aa7.04□□□□□ -1.28
NUP54-207ENST00000508583 SPINK9Q5DT21 86 aa7.04□□□□□ -1.28
NUP54-207ENST00000508583 GGNBP1Q5YKI7 109 aa7.04□□□□□ -1.28
NUP54-207ENST00000508583 NRARPQ7Z6K4 114 aa7.04□□□□□ -1.28
NUP54-207ENST00000508583 C1QL4Q86Z23 238 aa7.04□□□□□ -1.28
NUP54-207ENST00000508583 ZNF502Q8TBZ5 544 aa7.04□□□□□ -1.28
NUP54-207ENST00000508583 OR4C12Q96R67 309 aa7.04□□□□□ -1.28
NUP54-207ENST00000508583 MFSD2BA6NFX1 497 aa7.03□□□□□ -1.28
NUP54-207ENST00000508583 SNRPGP15A8MWD9 76 aa7.03□□□□□ -1.28
NUP54-207ENST00000508583 BMPR1BO00238 502 aa7.03□□□□□ -1.28
NUP54-207ENST00000508583 PITX3O75364 302 aa7.03□□□□□ -1.28
NUP54-207ENST00000508583 IFNA10P01566 189 aa7.03□□□□□ -1.28
NUP54-207ENST00000508583 CLEC3BP05452 202 aa7.03□□□□□ -1.28
NUP54-207ENST00000508583 RNASE2P10153 161 aaKnown RBP7.03□□□□□ -1.28
NUP54-207ENST00000508583 SLC25A4P12235 298 aa7.03□□□□□ -1.28
NUP54-207ENST00000508583 IGLL1P15814 213 aa7.03□□□□□ -1.28
NUP54-207ENST00000508583 NPY1RP25929 384 aa7.03□□□□□ -1.28
NUP54-207ENST00000508583 FCGR2BP31994 310 aaPredicted RBP7.03□□□□□ -1.28
NUP54-207ENST00000508583 GPR183P32249 361 aa7.03□□□□□ -1.28
NUP54-207ENST00000508583 NKX2-1P43699 371 aaPredicted RBP7.03□□□□□ -1.28
NUP54-207ENST00000508583 NPBWR1P48145 328 aa7.03□□□□□ -1.28
NUP54-207ENST00000508583 SLURP1P55000 103 aa7.03□□□□□ -1.28
NUP54-207ENST00000508583 RAB11AP62491 216 aa7.03□□□□□ -1.28
NUP54-207ENST00000508583 DEFA5Q01523 94 aa7.03□□□□□ -1.28
NUP54-207ENST00000508583 BSXQ3C1V8 233 aa7.03□□□□□ -1.28
NUP54-207ENST00000508583 C2orf83Q53S99 150 aa7.03□□□□□ -1.28
NUP54-207ENST00000508583 Q56UQ5 140 aa7.03□□□□□ -1.28
NUP54-207ENST00000508583 SAMD5Q5TGI4 173 aa7.03□□□□□ -1.28
NUP54-207ENST00000508583 CLEC19AQ6UXS0 136 aa7.03□□□□□ -1.28
NUP54-207ENST00000508583 REC114Q7Z4M0 266 aa7.03□□□□□ -1.28
NUP54-207ENST00000508583 GPHB5Q86YW7 130 aa7.03□□□□□ -1.28
NUP54-207ENST00000508583 C12orf45Q8N5I9 185 aaPredicted RBP7.03□□□□□ -1.28
NUP54-207ENST00000508583 OR9G4Q8NGQ1 327 aa7.03□□□□□ -1.28
NUP54-207ENST00000508583 SCARB1Q8WTV0 552 aa7.03□□□□□ -1.28
NUP54-207ENST00000508583 DCUN1D4Q92564 292 aa7.03□□□□□ -1.28
NUP54-207ENST00000508583 DLX4Q92988 240 aaPredicted RBP7.03□□□□□ -1.28
NUP54-207ENST00000508583 PINX1Q96BK5 328 aaKnown RBP7.03□□□□□ -1.28
NUP54-207ENST00000508583 CCDC140Q96MF4 163 aa7.03□□□□□ -1.28
NUP54-207ENST00000508583 C5orf51A6NDU8 294 aa7.02□□□□□ -1.29
NUP54-207ENST00000508583 INMT-MINDY4F8WBC2 141 aa7.02□□□□□ -1.29
NUP54-207ENST00000508583 I3L2K1 104 aa7.02□□□□□ -1.29
NUP54-207ENST00000508583 K7EIM0 57 aa7.02□□□□□ -1.29
NUP54-207ENST00000508583 LGALS9O00182 355 aa7.02□□□□□ -1.29
NUP54-207ENST00000508583 TGOLN2O43493 480 aa7.02□□□□□ -1.29
NUP54-207ENST00000508583 SYNGR2O43760 224 aa7.02□□□□□ -1.29
NUP54-207ENST00000508583 GNG7O60262 68 aa7.02□□□□□ -1.29
NUP54-207ENST00000508583 SAP30O75446 220 aa7.02□□□□□ -1.29
NUP54-207ENST00000508583 ADAP1O75689 374 aa7.02□□□□□ -1.29
NUP54-207ENST00000508583 SCAF4O95104 1147 aaKnown RBP7.02□□□□□ -1.29
NUP54-207ENST00000508583 MT-CO2P00403 227 aa7.02□□□□□ -1.29
NUP54-207ENST00000508583 SYNJ2BPP57105 145 aa7.02□□□□□ -1.29
NUP54-207ENST00000508583 IFITM3Q01628 133 aa7.02□□□□□ -1.29
NUP54-207ENST00000508583 KLF5Q13887 457 aaPredicted RBP7.02□□□□□ -1.29
NUP54-207ENST00000508583 IAH1Q2TAA2 248 aaPredicted RBP7.02□□□□□ -1.29
NUP54-207ENST00000508583 KPRPQ5T749 579 aaPredicted RBP7.02□□□□□ -1.29
NUP54-207ENST00000508583 PVRIGQ6DKI7 326 aa7.02□□□□□ -1.29
NUP54-207ENST00000508583 ACSM6Q6P461 480 aa7.02□□□□□ -1.29
NUP54-207ENST00000508583 C19orf35Q6ZS72 473 aa7.02□□□□□ -1.29
NUP54-207ENST00000508583 UBAC2Q8NBM4 344 aa7.02□□□□□ -1.29
NUP54-207ENST00000508583 UXS1Q8NBZ7 420 aa7.02□□□□□ -1.29
NUP54-207ENST00000508583 OR52B4Q8NGK2 314 aa7.02□□□□□ -1.29
NUP54-207ENST00000508583 SEC22CQ9BRL7 303 aa7.02□□□□□ -1.29
NUP54-207ENST00000508583 MARVELD1Q9BSK0 173 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms