RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 ZNF45Q02386 682 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 ATP5G2Q06055 141 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 EGFEM1PQ0D2K5 195 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 C9orf66Q5T8R8 295 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 AADACL3Q5VUY0 350 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 OR4A47Q6IF82 309 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 LAX1Q8IWV1 398 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 MMD2Q8IY49 270 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 PUSL1Q8N0Z8 303 aaKnown RBP3.45□□□□□ -1.86
NUP54-206ENST00000508465 TCTEX1D1Q8N7M0 179 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 DMBX1Q8NFW5 382 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 OR10W1Q8NGF6 305 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 OR4D10Q8NGI6 311 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 TMEM167AQ8TBQ9 72 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 DYNC2LI1Q8TCX1 351 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 FCAMRQ8WWV6 532 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 MOB3AQ96BX8 217 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 DGCR14Q96DF8 476 aaKnown RBP3.45□□□□□ -1.86
NUP54-206ENST00000508465 SPIN2AQ99865 258 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 ASCL2Q99929 193 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 SPIN2BQ9BPZ2 258 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 MCRIP2Q9BUT9 160 aaKnown RBP3.45□□□□□ -1.86
NUP54-206ENST00000508465 HINT2Q9BX68 163 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 FXYD6Q9H0Q3 95 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 ZC4H2Q9NQZ6 224 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 EXTL2Q9UBQ6 330 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 ANAPC10Q9UM13 185 aa3.45□□□□□ -1.86
NUP54-206ENST00000508465 NBEAL2Q6ZNJ1 2754 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 IGHV3-21A0A0B4J1V1 117 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 IGHV3-35A0A0C4DH35 117 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 A0A0G2JLM5 398 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 TEX50A0A1B0GTY4 177 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 IZUMO1RA6ND01 250 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 CBY3A6NI87 242 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 PPP5D1E7EU14 171 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 H3BMQ9 156 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 GPR31O00270 319 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 KBTBD11O94819 623 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 IFNA6P05013 189 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 ZNF735P0CB33 412 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 DEFA4P12838 97 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 SPNP16150 400 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 F2RP25116 425 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 PSMB6P28072 239 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 RCVRNP35243 200 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 KIR2DS2P43631 304 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 RPL5P46777 297 aaKnown RBP3.44□□□□□ -1.86
NUP54-206ENST00000508465 TMBIM6P55061 237 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 OR2B8PP59922 312 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 RPL8P62917 257 aaKnown RBP3.44□□□□□ -1.86
NUP54-206ENST00000508465 EXOSC2Q13868 293 aaKnown RBP3.44□□□□□ -1.86
NUP54-206ENST00000508465 KLF5Q13887 457 aaPredicted RBP3.44□□□□□ -1.86
NUP54-206ENST00000508465 SP6Q3SY56 376 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 PYHIN1Q6K0P9 492 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 FAAP20Q6NZ36 180 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 ZNF343Q6P1L6 599 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 IL34Q6ZMJ4 242 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 CMTM1Q8IZ96 169 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 TTC9CQ8N5M4 171 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 TMED6Q8WW62 240 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 AP3S1Q92572 193 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 ISOC1Q96CN7 298 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 GPR61Q9BZJ8 451 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 SLA2Q9H6Q3 261 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 SLC2A9Q9NRM0 540 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 PEF1Q9UBV8 284 aaKnown RBP3.44□□□□□ -1.86
NUP54-206ENST00000508465 MTFP1Q9UDX5 166 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 OR51B2Q9Y5P1 312 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 CEPT1Q9Y6K0 416 aa3.44□□□□□ -1.86
NUP54-206ENST00000508465 A0A0A0MQY5 61 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 TRBV9A0A0B4J1U6 114 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 CCDC160A6NGH7 325 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 H3BUA1 57 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 RBFOX2O43251 390 aaKnown RBP eCLIP3.43□□□□□ -1.86
NUP54-206ENST00000508465 SNAPC5O75971 98 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 RAB3DO95716 219 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 HPRT1P00492 218 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 IGKV1-39P01597 117 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 IGHV3-48P01763 117 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 IGKV1D-39P04432 117 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 CSN3P07498 182 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 TRAPPC2P0DI81 140 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 TRAPPC2BP0DI82 140 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 OR13C7P0DN81 318 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 NQO2P16083 231 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 ANXA7P20073 488 aaKnown RBP3.43□□□□□ -1.86
NUP54-206ENST00000508465 TNFSF8P32971 234 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 MAS1LP35410 378 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 TAS2R31P59538 309 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 ERVK-16P61578 105 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 CATR1Q13166 79 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 MSMO1Q15800 293 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 C15orf32Q32M92 178 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 SCGB2B2Q4G0G5 96 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 SPINK9Q5DT21 86 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 RNASE10Q5GAN6 216 aaKnown RBP3.43□□□□□ -1.86
NUP54-206ENST00000508465 SLC25A24Q6NUK1 477 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 STEAP1BQ6NZ63 245 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 CLEC19AQ6UXS0 136 aa3.43□□□□□ -1.86
NUP54-206ENST00000508465 ADAMTSL5Q6ZMM2 481 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms