RNA–Protein interactions for RNA: ENST00000508387.5

NR1I3-225, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 634 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-225ENST00000508387 PRR13Q9NZ81 148 aa9.54□□□□□ -0.88
NR1I3-225ENST00000508387 MRPL36Q9P0J6 103 aaKnown RBP9.54□□□□□ -0.88
NR1I3-225ENST00000508387 CTSDP07339 412 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-225ENST00000508387 OR5AC1P0C628 307 aa9.53□□□□□ -0.88
NR1I3-225ENST00000508387 TRIM16LQ309B1 348 aa9.53□□□□□ -0.88
NR1I3-225ENST00000508387 SPSB3Q6PJ21 355 aa9.53□□□□□ -0.88
NR1I3-225ENST00000508387 Q6ZRM9 215 aa9.53□□□□□ -0.88
NR1I3-225ENST00000508387 OR4C16Q8NGL9 310 aa9.53□□□□□ -0.88
NR1I3-225ENST00000508387 TERB2Q8NHR7 220 aa9.53□□□□□ -0.88
NR1I3-225ENST00000508387 SMIM4Q8WVI0 70 aa9.53□□□□□ -0.88
NR1I3-225ENST00000508387 RNF2Q99496 336 aa9.53□□□□□ -0.88
NR1I3-225ENST00000508387 RTBDNQ9BSG5 229 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-225ENST00000508387 GGTLC1Q9BX51 225 aa9.53□□□□□ -0.88
NR1I3-225ENST00000508387 C5orf66Q9H5L9 145 aa9.53□□□□□ -0.88
NR1I3-225ENST00000508387 COPZ2Q9P299 210 aa9.53□□□□□ -0.88
NR1I3-225ENST00000508387 IGKV3-7A0A075B6H7 116 aa9.52□□□□□ -0.89
NR1I3-225ENST00000508387 LOC102724200A0A096LPH7 203 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-225ENST00000508387 TRAV25A0A0B4J276 109 aa9.52□□□□□ -0.89
NR1I3-225ENST00000508387 LCE6AA0A183 80 aa9.52□□□□□ -0.89
NR1I3-225ENST00000508387 TSPAN4O14817 238 aa9.52□□□□□ -0.89
NR1I3-225ENST00000508387 YIF1AO95070 293 aa9.52□□□□□ -0.89
NR1I3-225ENST00000508387 RNASE2P10153 161 aaKnown RBP9.52□□□□□ -0.89
NR1I3-225ENST00000508387 TBPP20226 339 aa9.52□□□□□ -0.89
NR1I3-225ENST00000508387 UCP1P25874 307 aa9.52□□□□□ -0.89
NR1I3-225ENST00000508387 ETV6P41212 452 aa9.52□□□□□ -0.89
NR1I3-225ENST00000508387 MFAP4P55083 255 aa9.52□□□□□ -0.89
NR1I3-225ENST00000508387 IL18Q14116 193 aa9.52□□□□□ -0.89
NR1I3-225ENST00000508387 MLANAQ16655 118 aa9.52□□□□□ -0.89
NR1I3-225ENST00000508387 SLC35G3Q8N808 338 aa9.52□□□□□ -0.89
NR1I3-225ENST00000508387 SPAG8Q99932 426 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-225ENST00000508387 OVOL2Q9BRP0 275 aa9.52□□□□□ -0.89
NR1I3-225ENST00000508387 NXF2Q9GZY0 626 aaKnown RBP9.52□□□□□ -0.89
NR1I3-225ENST00000508387 CCDC59Q9P031 241 aaKnown RBP9.52□□□□□ -0.89
NR1I3-225ENST00000508387 IGHV3-66A0A0C4DH42 116 aa9.51□□□□□ -0.89
NR1I3-225ENST00000508387 IGHV7-4-1A0A0J9YVY3 117 aa9.51□□□□□ -0.89
NR1I3-225ENST00000508387 C15orf62A8K5M9 175 aa9.51□□□□□ -0.89
NR1I3-225ENST00000508387 H3BMQ9 156 aa9.51□□□□□ -0.89
NR1I3-225ENST00000508387 CHEK1O14757 476 aa9.51□□□□□ -0.89
NR1I3-225ENST00000508387 NUPL2O15504 423 aaKnown RBP9.51□□□□□ -0.89
NR1I3-225ENST00000508387 NXPH3O95157 252 aa9.51□□□□□ -0.89
NR1I3-225ENST00000508387 IFNA17P01571 189 aa9.51□□□□□ -0.89
NR1I3-225ENST00000508387 APOHP02749 345 aaPredicted RBP9.51□□□□□ -0.89
NR1I3-225ENST00000508387 FCGR2BP31994 310 aaPredicted RBP9.51□□□□□ -0.89
NR1I3-225ENST00000508387 TFPI2P48307 235 aa9.51□□□□□ -0.89
NR1I3-225ENST00000508387 HOXA1P49639 335 aaPredicted RBP9.51□□□□□ -0.89
NR1I3-225ENST00000508387 EWSR1Q01844 656 aaKnown RBP eCLIP9.51□□□□□ -0.89
NR1I3-225ENST00000508387 APRG1Q8IVJ8 170 aa9.51□□□□□ -0.89
NR1I3-225ENST00000508387 CCDC71LQ8N9Z2 235 aa9.51□□□□□ -0.89
NR1I3-225ENST00000508387 DIRAS2Q96HU8 199 aa9.51□□□□□ -0.89
NR1I3-225ENST00000508387 ATP6V0BQ99437 205 aa9.51□□□□□ -0.89
NR1I3-225ENST00000508387 RHPN1-AS1Q9BWJ2 59 aa9.51□□□□□ -0.89
NR1I3-225ENST00000508387 C6orf62Q9GZU0 229 aaPredicted RBP9.51□□□□□ -0.89
NR1I3-225ENST00000508387 FNDC4Q9H6D8 234 aaPredicted RBP9.51□□□□□ -0.89
NR1I3-225ENST00000508387 SMPXQ9UHP9 88 aa9.51□□□□□ -0.89
NR1I3-225ENST00000508387 BIRC6Q9NR09 4857 aa9.5□□□□□ -0.89
NR1I3-225ENST00000508387 K7EMT4 169 aa9.5□□□□□ -0.89
NR1I3-225ENST00000508387 GNG7O60262 68 aa9.5□□□□□ -0.89
NR1I3-225ENST00000508387 RPL35AP18077 110 aaKnown RBP9.5□□□□□ -0.89
NR1I3-225ENST00000508387 ERHP84090 104 aaKnown RBP9.5□□□□□ -0.89
NR1I3-225ENST00000508387 MEF2DQ14814 521 aa9.5□□□□□ -0.89
NR1I3-225ENST00000508387 DEFB135Q30KP9 77 aa9.5□□□□□ -0.89
NR1I3-225ENST00000508387 ANKRD55Q3KP44 614 aa9.5□□□□□ -0.89
NR1I3-225ENST00000508387 LILRB2Q8N423 598 aa9.5□□□□□ -0.89
NR1I3-225ENST00000508387 OR51S1Q8NGJ8 323 aa9.5□□□□□ -0.89
NR1I3-225ENST00000508387 RNASE11Q8TAA1 199 aaKnown RBP9.5□□□□□ -0.89
NR1I3-225ENST00000508387 ZFAND1Q8TCF1 268 aa9.5□□□□□ -0.89
NR1I3-225ENST00000508387 GLYATL2Q8WU03 294 aa9.5□□□□□ -0.89
NR1I3-225ENST00000508387 RAB2BQ8WUD1 216 aa9.5□□□□□ -0.89
NR1I3-225ENST00000508387 ST8SIA2Q92186 375 aa9.5□□□□□ -0.89
NR1I3-225ENST00000508387 TMEM230Q96A57 120 aa9.5□□□□□ -0.89
NR1I3-225ENST00000508387 OR10C1Q96KK4 312 aa9.5□□□□□ -0.89
NR1I3-225ENST00000508387 SLIRPQ9GZT3 109 aaKnown RBP9.5□□□□□ -0.89
NR1I3-225ENST00000508387 TMEM222Q9H0R3 208 aa9.5□□□□□ -0.89
NR1I3-225ENST00000508387 NAA60Q9H7X0 242 aa9.5□□□□□ -0.89
NR1I3-225ENST00000508387 ZFAND3Q9H8U3 227 aa9.5□□□□□ -0.89
NR1I3-225ENST00000508387 A0A1B0GU03 582 aa9.49□□□□□ -0.89
NR1I3-225ENST00000508387 RELQ04864 619 aaPredicted RBP9.49□□□□□ -0.89
NR1I3-225ENST00000508387 PVRIGQ6DKI7 326 aa9.49□□□□□ -0.89
NR1I3-225ENST00000508387 TOMM20LQ6UXN7 152 aa9.49□□□□□ -0.89
NR1I3-225ENST00000508387 SELENOHQ8IZQ5 122 aaKnown RBP9.49□□□□□ -0.89
NR1I3-225ENST00000508387 GBGT1Q8N5D6 347 aa9.49□□□□□ -0.89
NR1I3-225ENST00000508387 FAM24BQ8N5W8 94 aa9.49□□□□□ -0.89
NR1I3-225ENST00000508387 TMEM116Q8NCL8 245 aa9.49□□□□□ -0.89
NR1I3-225ENST00000508387 TXN2Q99757 166 aa9.49□□□□□ -0.89
NR1I3-225ENST00000508387 C14orf166Q9Y224 244 aaKnown RBP9.49□□□□□ -0.89
NR1I3-225ENST00000508387 TEX13DA0A0J9YY54 714 aaPredicted RBP9.48□□□□□ -0.89
NR1I3-225ENST00000508387 ANKRD20A5PA0PJZ0 165 aa9.48□□□□□ -0.89
NR1I3-225ENST00000508387 CRYM-AS1A6NIL9 109 aa9.48□□□□□ -0.89
NR1I3-225ENST00000508387 DISC1C4P0D8 188 aa9.48□□□□□ -0.89
NR1I3-225ENST00000508387 INS-IGF2F8WCM5 200 aa9.48□□□□□ -0.89
NR1I3-225ENST00000508387 CTDSPLO15194 276 aa9.48□□□□□ -0.89
NR1I3-225ENST00000508387 CDS2O95674 445 aa9.48□□□□□ -0.89
NR1I3-225ENST00000508387 AKAIN1P0CW23 69 aa9.48□□□□□ -0.89
NR1I3-225ENST00000508387 SNCAP37840 140 aa9.48□□□□□ -0.89
NR1I3-225ENST00000508387 TMBIM6P55061 237 aa9.48□□□□□ -0.89
NR1I3-225ENST00000508387 MRPS10P82664 201 aaKnown RBP9.48□□□□□ -0.89
NR1I3-225ENST00000508387 SSBP1Q04837 148 aaKnown RBP9.48□□□□□ -0.89
NR1I3-225ENST00000508387 TMEM268Q5VZI3 342 aa9.48□□□□□ -0.89
NR1I3-225ENST00000508387 FAM90A2PQ658T7 463 aa9.48□□□□□ -0.89
NR1I3-225ENST00000508387 LAMTOR1Q6IAA8 161 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms