RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 MAGEA12P43365 314 aa0.78□□□□□ -2.28
SMN2-208ENST00000508258 FXYD2P54710 66 aa0.78□□□□□ -2.28
SMN2-208ENST00000508258 AQP4P55087 323 aa0.78□□□□□ -2.28
SMN2-208ENST00000508258 TMEM258P61165 79 aa0.78□□□□□ -2.28
SMN2-208ENST00000508258 RPL26P61254 145 aaKnown RBP0.78□□□□□ -2.28
SMN2-208ENST00000508258 HSPE1P61604 102 aaKnown RBP0.78□□□□□ -2.28
SMN2-208ENST00000508258 SUPT4H1P63272 117 aaKnown RBP0.78□□□□□ -2.28
SMN2-208ENST00000508258 ERHP84090 104 aaKnown RBP0.78□□□□□ -2.28
SMN2-208ENST00000508258 RELAQ04206 551 aa0.78□□□□□ -2.28
SMN2-208ENST00000508258 HACD4Q5VWC8 232 aa0.78□□□□□ -2.28
SMN2-208ENST00000508258 FAM173BQ6P4H8 233 aa0.78□□□□□ -2.28
SMN2-208ENST00000508258 LYG2Q86SG7 212 aa0.78□□□□□ -2.28
SMN2-208ENST00000508258 KTN1-AS1Q86SY8 53 aa0.78□□□□□ -2.28
SMN2-208ENST00000508258 KRT222Q8N1A0 295 aa0.78□□□□□ -2.28
SMN2-208ENST00000508258 OR11H6Q8NGC7 330 aa0.78□□□□□ -2.28
SMN2-208ENST00000508258 RNASE11Q8TAA1 199 aaKnown RBP0.78□□□□□ -2.28
SMN2-208ENST00000508258 AP3S1Q92572 193 aa0.78□□□□□ -2.28
SMN2-208ENST00000508258 PRRT1Q99946 306 aa0.78□□□□□ -2.28
SMN2-208ENST00000508258 HSPB9Q9BQS6 159 aa0.78□□□□□ -2.28
SMN2-208ENST00000508258 DOHHQ9BU89 302 aa0.78□□□□□ -2.28
SMN2-208ENST00000508258 CCDC90BQ9GZT6 254 aa0.78□□□□□ -2.28
SMN2-208ENST00000508258 ENY2Q9NPA8 101 aa0.78□□□□□ -2.28
SMN2-208ENST00000508258 OPTCQ9UBM4 332 aa0.78□□□□□ -2.28
SMN2-208ENST00000508258 STOML2Q9UJZ1 356 aa0.78□□□□□ -2.28
SMN2-208ENST00000508258 RPL26L1Q9UNX3 145 aaKnown RBP0.78□□□□□ -2.28
SMN2-208ENST00000508258 FAM32AQ9Y421 112 aaKnown RBP0.78□□□□□ -2.28
SMN2-208ENST00000508258 SDK2Q58EX2 2172 aa0.78□□□□□ -2.28
SMN2-208ENST00000508258 KIF24Q5T7B8 1368 aa0.78□□□□□ -2.28
SMN2-208ENST00000508258 PXDNLA1KZ92 1463 aa0.78□□□□□ -2.28
SMN2-208ENST00000508258 KIF13BQ9NQT8 1826 aa0.78□□□□□ -2.29
SMN2-208ENST00000508258 TRAV4A0A0B4J268 109 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 TRAPPC13A5PLN9 417 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 MEIS3P1A6NDR6 274 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 HMSDA8MTL9 139 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 SULT1B1O43704 296 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 CIAO1O76071 339 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 OR5F1O95221 314 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 C1QCP02747 245 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 IGKV1-16P04430 117 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 NEFHP12036 1026 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 SERPINB9P50453 376 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 DEFB103AP81534 67 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 KRR1Q13601 381 aaKnown RBP0.77□□□□□ -2.29
SMN2-208ENST00000508258 LINC01554Q52M75 96 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 PCOTHQ58A44 107 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 Q6Q795 121 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 GOLT1AQ6ZVE7 132 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 LCA10Q71F78 164 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 MIR17HGQ75NE6 70 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 LRRC28Q86X40 367 aaPredicted RBP0.77□□□□□ -2.29
SMN2-208ENST00000508258 C9orf163Q8N9P6 203 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 GNPDA2Q8TDQ7 276 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 C11orf40Q8WZ69 217 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 GPR146Q96CH1 333 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 CEP19Q96LK0 163 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 C2orf50Q96LR7 162 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 SCGB3A1Q96QR1 104 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 PHB2Q99623 299 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 TVP23BQ9NYZ1 205 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 ERGIC3Q9Y282 383 aa0.77□□□□□ -2.29
SMN2-208ENST00000508258 GREB1Q4ZG55 1949 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 KIF1BO60333 1816 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 GLI3P10071 1580 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 FMN1Q68DA7 1419 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 MIA2Q96PC5 1412 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 TRBV19A0A075B6N1 114 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 IGKV1-9A0A0C4DH69 117 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 ZNF860A6NHJ4 632 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 IBA57-AS1B1ANH7 110 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 E5RI56 91 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 SHBGP04278 402 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 TRGC1P0CF51 173 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 COX6A1P12074 109 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 ERP29P30040 261 aaKnown RBP0.76□□□□□ -2.29
SMN2-208ENST00000508258 SRIP30626 198 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 GNG10P50151 68 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 RPL19P84098 196 aaKnown RBP0.76□□□□□ -2.29
SMN2-208ENST00000508258 SLC38A11Q08AI6 406 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 POU6F1Q14863 301 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 NDUFA5Q16718 116 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 KRTAP13-4Q3LI77 160 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 Q6ZRN7 208 aaPredicted RBP0.76□□□□□ -2.29
SMN2-208ENST00000508258 TMED4Q7Z7H5 227 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 DHFR2Q86XF0 187 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 CLVS1Q8IUQ0 354 aaPredicted RBP0.76□□□□□ -2.29
SMN2-208ENST00000508258 TMEM86AQ8N2M4 240 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 SIGLECL1Q8N7X8 197 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 ZNF439Q8NDP4 499 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 OR52R1Q8NGF1 315 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 SLC25A40Q8TBP6 338 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 TMEM106AQ96A25 262 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 TMEM133Q9H2Q1 129 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 SLC39A9Q9NUM3 307 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 PYCARDQ9ULZ3 195 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 BAIAP2Q9UQB8 552 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 LHFPL6Q9Y693 200 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 MALRD1Q5VYJ5 2156 aa0.76□□□□□ -2.29
SMN2-208ENST00000508258 COL5A3P25940 1745 aaPredicted RBP0.75□□□□□ -2.29
SMN2-208ENST00000508258 MED1Q15648 1581 aaPredicted RBP0.75□□□□□ -2.29
SMN2-208ENST00000508258 RIC1Q4ADV7 1423 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms