RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 PRRX1P54821 245 aa10.96□□□□□ -0.66
SNCAIP-209ENST00000508017 C21orf62-AS1Q17RA5 79 aa10.96□□□□□ -0.66
SNCAIP-209ENST00000508017 C1orf210Q8IVY1 113 aa10.96□□□□□ -0.66
SNCAIP-209ENST00000508017 CORO2AQ92828 525 aa10.96□□□□□ -0.66
SNCAIP-209ENST00000508017 OR2V2Q96R30 315 aa10.96□□□□□ -0.66
SNCAIP-209ENST00000508017 TXN2Q99757 166 aa10.96□□□□□ -0.66
SNCAIP-209ENST00000508017 ARRDC1-AS1Q9H2J1 176 aa10.96□□□□□ -0.66
SNCAIP-209ENST00000508017 RAI1Q7Z5J4 1906 aaPredicted RBP10.96□□□□□ -0.66
SNCAIP-209ENST00000508017 SRRM4A7MD48 611 aaKnown RBP10.95□□□□□ -0.66
SNCAIP-209ENST00000508017 IGLV1-44P01699 117 aa10.95□□□□□ -0.66
SNCAIP-209ENST00000508017 HLA-DQA1P01909 254 aa10.95□□□□□ -0.66
SNCAIP-209ENST00000508017 IGKV1-16P04430 117 aa10.95□□□□□ -0.66
SNCAIP-209ENST00000508017 PRR31Q5SQ13 230 aa10.95□□□□□ -0.66
SNCAIP-209ENST00000508017 TMEM178AQ8NBL3 297 aa10.95□□□□□ -0.66
SNCAIP-209ENST00000508017 ZNF439Q8NDP4 499 aa10.95□□□□□ -0.66
SNCAIP-209ENST00000508017 PPP1R35Q8TAP8 253 aa10.95□□□□□ -0.66
SNCAIP-209ENST00000508017 HNRNPA3P51991 378 aaKnown RBP10.95□□□□□ -0.66
SNCAIP-209ENST00000508017 RPL19P84098 196 aaKnown RBP10.95□□□□□ -0.66
SNCAIP-209ENST00000508017 PRCDQ00LT1 54 aa10.95□□□□□ -0.66
SNCAIP-209ENST00000508017 GDF5OSQ5U4N7 250 aa10.95□□□□□ -0.66
SNCAIP-209ENST00000508017 Q6ZVH6 145 aa10.95□□□□□ -0.66
SNCAIP-209ENST00000508017 OR10W1Q8NGF6 305 aa10.95□□□□□ -0.66
SNCAIP-209ENST00000508017 C18orf32Q8TCD1 76 aa10.95□□□□□ -0.66
SNCAIP-209ENST00000508017 SLC35D1Q9NTN3 355 aa10.95□□□□□ -0.66
SNCAIP-209ENST00000508017 LNP1A1A4G5 178 aa10.94□□□□□ -0.66
SNCAIP-209ENST00000508017 IZUMO1RA6ND01 250 aa10.94□□□□□ -0.66
SNCAIP-209ENST00000508017 FNDC10F2Z333 226 aa10.94□□□□□ -0.66
SNCAIP-209ENST00000508017 MMP23AO75900 390 aa10.94□□□□□ -0.66
SNCAIP-209ENST00000508017 LAMTOR2Q9Y2Q5 125 aa10.94□□□□□ -0.66
SNCAIP-209ENST00000508017 TEX50A0A1B0GTY4 177 aa10.94□□□□□ -0.66
SNCAIP-209ENST00000508017 FAM167A-AS1Q96KT0 104 aa10.94□□□□□ -0.66
SNCAIP-209ENST00000508017 SLC25A33Q9BSK2 321 aa10.94□□□□□ -0.66
SNCAIP-209ENST00000508017 SLC25A2Q9BXI2 301 aa10.94□□□□□ -0.66
SNCAIP-209ENST00000508017 CLEC7AQ9BXN2 247 aa10.94□□□□□ -0.66
SNCAIP-209ENST00000508017 KBTBD11-OT1A0A1B0GTJ5 212 aa10.93□□□□□ -0.66
SNCAIP-209ENST00000508017 UPK2O00526 184 aa10.93□□□□□ -0.66
SNCAIP-209ENST00000508017 SPRY3O43610 288 aa10.93□□□□□ -0.66
SNCAIP-209ENST00000508017 C8orf88P0DMB2 117 aa10.93□□□□□ -0.66
SNCAIP-209ENST00000508017 TAS2R45P59539 299 aa10.93□□□□□ -0.66
SNCAIP-209ENST00000508017 SSBP2P81877 361 aaPredicted RBP10.93□□□□□ -0.66
SNCAIP-209ENST00000508017 TNXAQ16473 311 aa10.93□□□□□ -0.66
SNCAIP-209ENST00000508017 COX19Q49B96 90 aa10.93□□□□□ -0.66
SNCAIP-209ENST00000508017 DHRS13Q6UX07 377 aa10.93□□□□□ -0.66
SNCAIP-209ENST00000508017 C1orf162Q8NEQ5 155 aaPredicted RBP10.93□□□□□ -0.66
SNCAIP-209ENST00000508017 ZNF355PQ9NSJ1 428 aa10.93□□□□□ -0.66
SNCAIP-209ENST00000508017 PRNDQ9UKY0 176 aa10.93□□□□□ -0.66
SNCAIP-209ENST00000508017 NAV3Q8IVL0 2385 aa10.93□□□□□ -0.66
SNCAIP-209ENST00000508017 A0A1W2PRE2 83 aa10.93□□□□□ -0.66
SNCAIP-209ENST00000508017 PYYP10082 97 aa10.93□□□□□ -0.66
SNCAIP-209ENST00000508017 RNASE2P10153 161 aaKnown RBP10.93□□□□□ -0.66
SNCAIP-209ENST00000508017 UBE2L3P68036 154 aaKnown RBP10.93□□□□□ -0.66
SNCAIP-209ENST00000508017 POU2AF1Q16633 256 aa10.93□□□□□ -0.66
SNCAIP-209ENST00000508017 VHLLQ6RSH7 139 aa10.93□□□□□ -0.66
SNCAIP-209ENST00000508017 SPACA3Q8IXA5 215 aa10.93□□□□□ -0.66
SNCAIP-209ENST00000508017 OR2T6Q8NHC8 308 aa10.93□□□□□ -0.66
SNCAIP-209ENST00000508017 ITLN1Q8WWA0 313 aa10.93□□□□□ -0.66
SNCAIP-209ENST00000508017 BORCS7Q96B45 105 aa10.93□□□□□ -0.66
SNCAIP-209ENST00000508017 ZNF331Q9NQX6 463 aaPredicted RBP10.93□□□□□ -0.66
SNCAIP-209ENST00000508017 ITGB1BP1O14713 200 aa10.92□□□□□ -0.66
SNCAIP-209ENST00000508017 CT45A6P0DMU7 189 aa10.92□□□□□ -0.66
SNCAIP-209ENST00000508017 CT45A5P0DMU8 189 aa10.92□□□□□ -0.66
SNCAIP-209ENST00000508017 CT45A7P0DMV0 189 aa10.92□□□□□ -0.66
SNCAIP-209ENST00000508017 GPR6P46095 362 aaPredicted RBP10.92□□□□□ -0.66
SNCAIP-209ENST00000508017 MZT1Q08AG7 82 aa10.92□□□□□ -0.66
SNCAIP-209ENST00000508017 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.92□□□□□ -0.66
SNCAIP-209ENST00000508017 DEFB108BQ8NET1 73 aa10.92□□□□□ -0.66
SNCAIP-209ENST00000508017 SNRNP40Q96DI7 357 aaKnown RBP10.92□□□□□ -0.66
SNCAIP-209ENST00000508017 TUBG2Q9NRH3 451 aa10.92□□□□□ -0.66
SNCAIP-209ENST00000508017 PSMB11A5LHX3 300 aa10.92□□□□□ -0.66
SNCAIP-209ENST00000508017 IGHG3P01860 377 aa10.92□□□□□ -0.66
SNCAIP-209ENST00000508017 REG1AP05451 166 aa10.92□□□□□ -0.66
SNCAIP-209ENST00000508017 HINT1P49773 126 aaPredicted RBP10.92□□□□□ -0.66
SNCAIP-209ENST00000508017 MFAP2P55001 183 aa10.92□□□□□ -0.66
SNCAIP-209ENST00000508017 RND1Q92730 232 aa10.92□□□□□ -0.66
SNCAIP-209ENST00000508017 SSBP4Q9BWG4 385 aaPredicted RBP10.92□□□□□ -0.66
SNCAIP-209ENST00000508017 ZNF257Q9Y2Q1 563 aa10.92□□□□□ -0.66
SNCAIP-209ENST00000508017 LHBP01229 141 aa10.91□□□□□ -0.66
SNCAIP-209ENST00000508017 IGHV3-48P01763 117 aa10.91□□□□□ -0.66
SNCAIP-209ENST00000508017 CFHR2P36980 270 aa10.91□□□□□ -0.66
SNCAIP-209ENST00000508017 C2orf83Q53S99 150 aa10.91□□□□□ -0.66
SNCAIP-209ENST00000508017 EBLN2Q6P2I7 272 aa10.91□□□□□ -0.66
SNCAIP-209ENST00000508017 C19orf35Q6ZS72 473 aa10.91□□□□□ -0.66
SNCAIP-209ENST00000508017 NUP35Q8NFH5 326 aa10.91□□□□□ -0.66
SNCAIP-209ENST00000508017 MBD6Q96DN6 1003 aa10.91□□□□□ -0.66
SNCAIP-209ENST00000508017 CBY1Q9Y3M2 126 aa10.91□□□□□ -0.66
SNCAIP-209ENST00000508017 PLCE1Q9P212 2302 aa10.91□□□□□ -0.66
SNCAIP-209ENST00000508017 A0A1W2PN81 502 aa10.9□□□□□ -0.66
SNCAIP-209ENST00000508017 ZNF883P0CG24 379 aa10.9□□□□□ -0.66
SNCAIP-209ENST00000508017 SAA1P0DJI8 122 aaPredicted RBP10.9□□□□□ -0.66
SNCAIP-209ENST00000508017 CD59P13987 128 aa10.9□□□□□ -0.66
SNCAIP-209ENST00000508017 TSPOP30536 169 aa10.9□□□□□ -0.66
SNCAIP-209ENST00000508017 SELENOVP59797 346 aa10.9□□□□□ -0.66
SNCAIP-209ENST00000508017 RPL8P62917 257 aaKnown RBP10.9□□□□□ -0.66
SNCAIP-209ENST00000508017 CD69Q07108 199 aa10.9□□□□□ -0.66
SNCAIP-209ENST00000508017 STUMQ69YW2 141 aa10.9□□□□□ -0.66
SNCAIP-209ENST00000508017 PRR27Q6MZM9 219 aa10.9□□□□□ -0.66
SNCAIP-209ENST00000508017 PNKDQ8N490 385 aa10.9□□□□□ -0.66
SNCAIP-209ENST00000508017 ADTRPQ96IZ2 230 aa10.9□□□□□ -0.66
SNCAIP-209ENST00000508017 COMMD5Q9GZQ3 224 aa10.9□□□□□ -0.66
SNCAIP-209ENST00000508017 ZNF71Q9NQZ8 489 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms