RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 RPL23AP62750 156 aaKnown RBP6.44□□□□□ -1.38
SCN1A-207ENST00000507401 SERF2P84101 59 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 EDDM3AQ14507 147 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 ICAM4Q14773 271 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 LY6EQ16553 131 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 LEMD1Q68G75 181 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 Q6P435 159 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 TOMM20LQ6UXN7 152 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 CYP2G1PQ6ZSU1 146 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 SSX7Q7RTT5 188 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 MRPL41Q8IXM3 137 aaKnown RBP6.44□□□□□ -1.38
SCN1A-207ENST00000507401 DYNAPQ8N1N2 210 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 Q8N2B8 174 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 OR51T1Q8NGJ9 327 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 ZNF596Q8TC21 504 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 MBD3L1Q8WWY6 194 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 CFHR4Q92496 578 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 PSMG3Q9BT73 122 aaPredicted RBP6.44□□□□□ -1.38
SCN1A-207ENST00000507401 CLEC7AQ9BXN2 247 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 PARD6GQ9BYG4 376 aaPredicted RBP6.44□□□□□ -1.38
SCN1A-207ENST00000507401 LPAR5Q9H1C0 372 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 NAA60Q9H7X0 242 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 SDF2L1Q9HCN8 221 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 FKBP11Q9NYL4 201 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 IL36RNQ9UBH0 155 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 TCF19Q9Y242 345 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 WNK1Q9H4A3 2382 aa6.44□□□□□ -1.38
SCN1A-207ENST00000507401 TGIF2-C20orf24A0A0A6YYL0 155 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 IGHV2-26A0A0B4J1V2 119 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 ODAMA1E959 279 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 C20orf202A1L168 122 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 MAP1LC3B2A6NCE7 125 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 SIRPB1O00241 398 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 SLC33A1O00400 549 aaPredicted RBP6.43□□□□□ -1.38
SCN1A-207ENST00000507401 CHST1O43916 411 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 CIDEAO60543 219 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 HRASP01112 189 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 IGLV1-47P01700 117 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 CGB3P0DN86 165 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 CGB7P0DN87 165 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 BCL2P10415 239 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 BRS3P32247 399 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 PRRX1P54821 245 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 TAS2R30P59541 319 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 VAMP2P63027 116 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 AESQ08117 197 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 UNC119Q13432 240 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 ARFRP1Q13795 201 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 ABCA11PQ4W5N1 156 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 LDLRAD2Q5SZI1 272 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 SPSB3Q6PJ21 355 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 RNF144BQ7Z419 303 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 C5orf24Q7Z6I8 188 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 THNSL2Q86YJ6 484 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 ABHD12Q8N2K0 398 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 GBGT1Q8N5D6 347 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 OR2C3Q8N628 320 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 GVQW1Q8N7I0 195 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 TPRX1Q8N7U7 411 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 CYB561D1Q8N8Q1 229 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 OR4B1Q8NGF8 309 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 OR4D6Q8NGJ1 314 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 OR5D18Q8NGL1 313 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 OR4X1Q8NH49 305 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 IL22RA2Q969J5 263 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 MOB3AQ96BX8 217 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 SPACA5Q96QH8 159 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 TM2D1Q9BX74 207 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 PRSS22Q9GZN4 317 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 MAP1LC3BQ9GZQ8 125 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 LINC00574Q9H8X3 128 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 C19orf73Q9NVV2 129 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 EHFQ9NZC4 300 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 OR6C3Q9NZP0 311 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 DPM3Q9P2X0 92 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 NAGKQ9UJ70 344 aa6.43□□□□□ -1.38
SCN1A-207ENST00000507401 CMYA5Q8N3K9 4069 aa6.42□□□□□ -1.38
SCN1A-207ENST00000507401 KBTBD11-OT1A0A1B0GTJ5 212 aa6.42□□□□□ -1.38
SCN1A-207ENST00000507401 OOSP1A8MZH6 123 aa6.42□□□□□ -1.38
SCN1A-207ENST00000507401 HSBP1L1C9JCN9 74 aa6.42□□□□□ -1.38
SCN1A-207ENST00000507401 H7BYZ3 331 aa6.42□□□□□ -1.38
SCN1A-207ENST00000507401 KCNAB3O43448 404 aa6.42□□□□□ -1.38
SCN1A-207ENST00000507401 IFNA5P01569 189 aa6.42□□□□□ -1.38
SCN1A-207ENST00000507401 PPBPP02775 128 aa6.42□□□□□ -1.38
SCN1A-207ENST00000507401 PFN1P07737 140 aaKnown RBP6.42□□□□□ -1.38
SCN1A-207ENST00000507401 ESDP10768 282 aa6.42□□□□□ -1.38
SCN1A-207ENST00000507401 SLC25A6P12236 298 aa6.42□□□□□ -1.38
SCN1A-207ENST00000507401 GNB3P16520 340 aa6.42□□□□□ -1.38
SCN1A-207ENST00000507401 ATP6V0CP27449 155 aa6.42□□□□□ -1.38
SCN1A-207ENST00000507401 G0S2P27469 103 aa6.42□□□□□ -1.38
SCN1A-207ENST00000507401 CEACAM3P40198 252 aa6.42□□□□□ -1.38
SCN1A-207ENST00000507401 SNU13P55769 128 aaKnown RBP6.42□□□□□ -1.38
SCN1A-207ENST00000507401 SELENOTP62341 195 aa6.42□□□□□ -1.38
SCN1A-207ENST00000507401 EWSR1Q01844 656 aaKnown RBP eCLIP6.42□□□□□ -1.38
SCN1A-207ENST00000507401 COX19Q49B96 90 aa6.42□□□□□ -1.38
SCN1A-207ENST00000507401 AARDQ4LEZ3 155 aa6.42□□□□□ -1.38
SCN1A-207ENST00000507401 KIAA2026Q5HYC2 2103 aa6.42□□□□□ -1.38
SCN1A-207ENST00000507401 ACTL10Q5JWF8 245 aa6.42□□□□□ -1.38
SCN1A-207ENST00000507401 TEX43Q6ZNM6 134 aa6.42□□□□□ -1.38
SCN1A-207ENST00000507401 TMEM182Q6ZP80 229 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms